Basic Information

Insect: Hermetia illucens
Gene Symbol: -
Assembly: GCA_905115235.1
Location: NC:16519761-16529450[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.42 23 5.3 0.6 2 20 207 225 206 227 0.91

2 12 6.6e-05 0.0036 17.3 3.9 2 23 249 271 248 271 0.97

3 12 0.0075 0.41 10.8 1.0 1 21 329 349 329 350 0.95

4 12 2.4e-05 0.0013 18.7 0.6 1 23 358 380 358 380 0.98

5 12 7.7e-06 0.00042 20.2 1.5 1 23 384 407 384 407 0.96

6 12 1.9e-06 0.0001 22.2 5.1 2 23 414 435 413 435 0.98

7 12 1.4e-07 7.4e-06 25.7 0.8 1 23 441 463 441 463 0.95

8 12 8.2e-07 4.5e-05 23.3 0.2 1 23 469 491 469 491 0.97

9 12 2.4e-05 0.0013 18.7 1.7 1 23 497 519 497 519 0.98

10 12 0.00022 0.012 15.7 0.1 1 23 525 547 525 547 0.98

11 12 0.00024 0.013 15.6 6.1 1 23 553 575 553 575 0.99

12 12 1.5e-07 7.9e-06 25.6 0.2 1 23 581 603 581 603 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.42	23	5.3	0.6	2	20	207	225	206	227	0.91
2	12	6.6e-05	0.0036	17.3	3.9	2	23	249	271	248	271	0.97
3	12	0.0075	0.41	10.8	1.0	1	21	329	349	329	350	0.95
4	12	2.4e-05	0.0013	18.7	0.6	1	23	358	380	358	380	0.98
5	12	7.7e-06	0.00042	20.2	1.5	1	23	384	407	384	407	0.96
6	12	1.9e-06	0.0001	22.2	5.1	2	23	414	435	413	435	0.98
7	12	1.4e-07	7.4e-06	25.7	0.8	1	23	441	463	441	463	0.95
8	12	8.2e-07	4.5e-05	23.3	0.2	1	23	469	491	469	491	0.97
9	12	2.4e-05	0.0013	18.7	1.7	1	23	497	519	497	519	0.98
10	12	0.00022	0.012	15.7	0.1	1	23	525	547	525	547	0.98
11	12	0.00024	0.013	15.6	6.1	1	23	553	575	553	575	0.99
12	12	1.5e-07	7.9e-06	25.6	0.2	1	23	581	603	581	603	0.99

Sequence Information

Coding Sequence: ATGGAAGTATCTTTACAGCAAATGTGTAGAACTTGTCTGGGTTCTGGAGTAGCATTGATTTCTCTACATGCAAACCCGGCAGTATCACAAGTTTGTACTGTTGGCGAGATGTTGGGGAATTTCACTACCGTCAAGGTCTCTGAAGATGATGGGCTACCAAACAAAGTTTGTTTGGCTTGTGTTAGCGAGATCAAGCGCTCTTACTTCTTCAAAATCAAATGTGAAAGTTCGCAGGATACGTTACAGCAATATTTGAAAGAAGTGTCGATCGAGGAAAGCGTAAAACAATCCCCAACTTCACCCTCACCTACACGATCACACACTGTAGTGGAAACGTACACGATCGCCAAAGAAGAAGGCACTGAACATAGTTCTGAAGCCGAAGAAGATTTAGtttcaaagaaagaagaaactgaAATCATTACAAATAACGAATGTGAAGATGTTGAAATGCTGCAAGTGCAACAAGTCGAGGAGACCGAGGAGTTGGTTGAAGTTCACGAGATTCAAGCCGAAAGCTATGATATGAATGACGAGAGTACAATGTATGAAATAAACGAATTTCTAGAGAATAGTAGTGACGGGGAAATCCAACAAGATGCTAGAGTAGTTATAATAGTATGTGAGACATGTTGCCACACATTCGAGAATAAAGAGGACTTTGAAGCACATGCGGCCACTTGCAAAAAGGAACCAGTCAGTACGGGCAAGAGAAAATCCAAGGCGGCGTCACGTTCACCAAAGAAATGTCCAGAGTGCCCCATGGATTTTGTACACCAGAAAAACCTCGATAAACATATAAGGAAATGCCATCGGCGCAACAGTGCATCGCAGGATGAGGAAAGAAATGAGGGCGAAACTGAAGATAAGACAAACAACGAAGATGATGAAGACGACGATGAAGATGCCACTCAGCCTTTGTTGGAAACTCTCCCCGAAGATGCTCTTTTAAAACATGATCCAACTTCGCTTCCGACGGGCGAATTCACATGTCCACGATGCGGTGCGGGTTTTGTCAATAGGAAATCATTCCAGTGTCATATGAAGATCAATAAATGCACGGAAAAGCAATTTATTTGTAAGTTCTGCGAAAAGGTGTTCATTAATGATAAAAGCTTGATTGAACACATAAAAACGCATGCGAAGGCGTTCAAGTGTAGCAAATGTACAAAATCGTTCTCGAAAGCGGAAAAACTTCAAGCGCATACTGAGAAGGCTCACAGCGGGGCGGTAAAGAATCAATGCAAATTCTGTGGGAAGTGTTTCACAATGTATTCCACGCTGAAGGATCATATGCGGACACACAGTGGAGAAAAGCCGTTCCTTTGTTCGATTTGCGGGAAAGGATTCAGTCAGAACACAAATCTCAAGCAACACATCATGCGACATAAAAATCTTAAGCCGTTCGCTTGCAAGGATTGCGATCTATCGTTCGTCAGTAAAGGCGAACTGAATGCCCACGTTCGCAAACATACCGGCGACCATCCTTTCAACTGCGACATGTGCAGTTCATCGTTCACCACTTCTAGTTCATTAGTTAAGCATAAACGAATTCATACCGGCGAACGTCCGTATGCGTGTGATCTCTGTCCGATGCGCTTTGCCGCTCTTGGTACTTTGCGAAACCATCGTCGTACACACACCGGCGAGAAACCATTCAAATGTGATCATTGCTCGCGATCATTTGCACAAAAGAGTGATTGTGTTACGCATATGCGTAGCCACACAGGTGAACGTCCTTATACATGTTCAGTATGCGGTTGGGGCTTCCCACAGTCGGGGACATTGAAAACACACATGAAGACCCATGAACGTGAAAGAGAACGAGAACGGGCGCAATCGGAGGGGGACAGTATGCTGGTGGAAATGGTTGCCGTAgatgatttaatttaa
Protein Sequence: MEVSLQQMCRTCLGSGVALISLHANPAVSQVCTVGEMLGNFTTVKVSEDDGLPNKVCLACVSEIKRSYFFKIKCESSQDTLQQYLKEVSIEESVKQSPTSPSPTRSHTVVETYTIAKEEGTEHSSEAEEDLVSKKEETEIITNNECEDVEMLQVQQVEETEELVEVHEIQAESYDMNDESTMYEINEFLENSSDGEIQQDARVVIIVCETCCHTFENKEDFEAHAATCKKEPVSTGKRKSKAASRSPKKCPECPMDFVHQKNLDKHIRKCHRRNSASQDEERNEGETEDKTNNEDDEDDDEDATQPLLETLPEDALLKHDPTSLPTGEFTCPRCGAGFVNRKSFQCHMKINKCTEKQFICKFCEKVFINDKSLIEHIKTHAKAFKCSKCTKSFSKAEKLQAHTEKAHSGAVKNQCKFCGKCFTMYSTLKDHMRTHSGEKPFLCSICGKGFSQNTNLKQHIMRHKNLKPFACKDCDLSFVSKGELNAHVRKHTGDHPFNCDMCSSSFTTSSSLVKHKRIHTGERPYACDLCPMRFAALGTLRNHRRTHTGEKPFKCDHCSRSFAQKSDCVTHMRSHTGERPYTCSVCGWGFPQSGTLKTHMKTHERERERERAQSEGDSMLVEMVAVDDLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -