Hill010732.1
Basic Information
- Insect
- Hermetia illucens
- Gene Symbol
- -
- Assembly
- GCA_905115235.1
- Location
- NC:13272736-13295044[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 6.5 3.5e+02 1.6 0.2 1 23 57 80 57 80 0.91 2 21 0.046 2.5 8.3 1.4 2 23 154 175 153 175 0.96 3 21 0.43 23 5.3 4.2 3 23 248 268 246 268 0.94 4 21 0.2 11 6.3 3.9 1 23 325 348 325 348 0.88 5 21 0.033 1.8 8.8 2.6 1 23 391 413 391 413 0.94 6 21 2.5e-06 0.00014 21.8 1.0 1 23 419 441 419 441 0.98 7 21 8.1e-06 0.00044 20.2 0.9 1 23 447 469 447 469 0.98 8 21 1.3e-05 0.0007 19.5 0.6 1 23 475 497 475 497 0.99 9 21 0.00067 0.037 14.1 0.8 1 23 503 525 503 525 0.98 10 21 3.5e-07 1.9e-05 24.5 2.2 1 23 531 553 531 553 0.98 11 21 6.2e-06 0.00034 20.5 2.0 1 23 559 581 559 581 0.99 12 21 0.71 39 4.6 0.1 1 23 649 672 649 672 0.93 13 21 0.016 0.86 9.8 7.2 2 23 753 774 752 774 0.97 14 21 0.032 1.8 8.8 1.8 1 23 829 852 829 852 0.93 15 21 0.012 0.63 10.2 3.3 1 19 895 913 895 917 0.91 16 21 2e-05 0.0011 18.9 0.2 1 23 923 945 923 945 0.98 17 21 0.00039 0.021 14.9 0.6 1 23 951 973 951 973 0.98 18 21 1.1e-05 0.00062 19.7 1.2 1 23 979 1001 979 1001 0.99 19 21 0.00016 0.0089 16.1 1.8 2 23 1008 1029 1007 1029 0.92 20 21 2.4e-06 0.00013 21.8 2.1 1 23 1035 1057 1035 1057 0.98 21 21 7.8e-07 4.3e-05 23.3 1.2 1 23 1063 1085 1063 1085 0.99
Sequence Information
- Coding Sequence
- ATGAGTGAATTTGATATCGAATATTACTATTTATCGGACTCTGAGATTAAAGGCGAATTTGATTTTGAAGATGCTGAAAATAAAGGATTTGAGGACAATGAGGAAGATTCGAGGTTTTATGAAGCGAAATGTGGTGATATTTTCGTTTCAAACAGTGGAAAGTATACTTTTGTCTGTGAGTTTTGTAGCGGCCGTTACGAAGATATGGGGTCATTTGGCGATCATCTGAAGGACACACATTTGGACTATGATACTGAAGAAGCAGAAGCAGAACCCGGAACAGAATTGAAAGTAGGAAATGGATACCCAGATGAAGGGGAAGAGACCAATTCTAAGGAAGTAGTGGAGGAAGAATGGCAATCTAATGATCATGACTTAATAGAGACACCTACTCCTGCCGATTTTGAGTTCATAGGATCACCTACTTCTGCGGATTCAACGTTAGTAGATTCGGATCTATATTGCACGTTATGTGATCGCCAGCTCAAAACAAAGTTAGCATTTTCACGACATAAGAATATACACAAATGTAAACTCATTGCTCAATATTTATCGGCACAGGCATTGGTATCATCAGATTTTCAGTCAAATTCTAACAAAGTAAAGGGGGAAGAATTGCAACCTTATGGTCATGACCTAAAAAAGGCACCTACTCCTGGGGATTCGACATTAAAGGAGACATCTACTCCTGCGGTTTCAACCTTACTAGAAACACCTACTCCTGCCGGTTCAGATCTATGTTGCAAGCCATGCAATCGCCAGTTCAAAACAAAATTAGCTTTTTCACGTCATAAAAACATACACAAATGTAAACTCATTGCTCAATATTTGGCTAAAAAGGCATTGGCGTGGTCAGATTCTCCAAAACAGGATTTAACTGCGGAAGTCTCAACATCGAGAGATTCTCCAATAGAGGACTTAGCTGCAGAAGTCTCGACAGATTCTCCAAGAACGCAAACCGAAGTCGGTCAATTCTTTTGTAGTTTTTGCAATCGTTACTTCAAAACAAGGCAAGGGTTCAAAGATCATTCGGTAAGTCGCCATGGTGACAAGATTCCAGAAGCACTGCGTGATGACCCCTCCCACCGTACCTGTAAATTCTGCCACATGAAGTTCGACAAAGTTCTGGAACGAGTAAGACACGAGGAAACTCATGACGAGGATAAGCCCTTCAGATGTGCATTGTGCCCGAAAACTTTTCGATTGAACTCCCAGCGCGAATTGCACAATCATAGTCACACAGGCGCCCATCCATATCCTTGCCCGCATTGCCCAAAAGCATTTACAACTCAAATCAATCGCTTACAACATATCCGCAGACATTTTGGCATCAAACGATTCACGTGTGAATATTGCGATAAGAAATTCGTCACCAATGTGCAACGAAACATTCATATTCGTATCCATACCCTCGAAAAACCATATCAATGCGAAGAGTGCGGGGAAAGATTTCGAGTCAGTGGACAGTTGCTCATGCATAAGAAGAGGCATTCAAACATTCGTGATTTCAAGTGTGATATATGCGAGAAGTCGTTCTTTGCAAAGGAGGATGTTAAGTCACATAGAATTTCACATTTCGAGGATCGTCCGTTCGAGTGTACTGAATGCGGGAAGAAGTTCCAACGGAAGAAAAACCTGACTGCACACCAGAAGCTCCATATGCCCGAGAAGAAATACGAATGTAATATTTGTGGGAAGAAGTTTGCACAGTGTGCTGGACTGTATTCGCATAGGAAAACACATGGCGTGACATACCTAAATCTTCTGTATAAAATGAGTGAATACGATATCGAATATTACTACTTATCGGATTCTGAAATTAGAGGCGAATTTCATTCTGAGGAAGATGAGGAAAATAAGAGATTTAAGGCCACTGAGGAAGATTCAAATGGTTACGAAGCGAAATGTGGCgatatttttgtttcaaatagTGGGAAGTACACTTTCGTCTGTGAGTTTTGTGGTGGCCGTTACGAAGATATGGAATCATTTGGCGATCATCTAAAGGACGCACATTTGGACTATGATGTCGAAGATTCATCGACTGTAGAATCCGGAACAGACTTGAAAGTAGGAAATGGATATCCAGTTGAAAGTGGAGAGAAAAATCTTAACAAAATACTGGAGGAAGGATGGCAATCCAATGATCATAACTTAATAGAGACACCTACTTCTGCCGATTCTGAGTTAGTAAAGGCACCTACTCCTGCGGATTCAAAGTTAATAGAGACACTCACCCCTGCCGATATGGGCCTATATTGTAAGTTATGTAATCGCCAGTTTAAAAGAAAGTTAACATTTTCACGTCATAGGTGTACTCACAAATATAAACTTATTACTGACAATTTAACTGCAAAGGTCTTGAAAGATTCTTCGATATCAACGAATTCACCAATAGAGGAGGTCTCAACACAATTTCCAGTAAAGGATTTAGCTACCAAGGTCTTAACAGATACTGGAAAAAAGCAAATCGAGGTCGATCAATTCTTTTGCAGCTTGTGCAGTCGATACTTCACAACAAAGCTAAAGTTAACAGATCATGCGGCAAGTCGACATGGTAACAATGTTCCAGAAGCACTTCGTGATGATTCCTCCTATCTTTCCTGCAAATTTTGCCACATGAAGTTCGATAAAGTGCTAGATCGAGTAGATCACGAGAAAACTCACGACGAGGAGAAACCCTTCAGATGTGCATTGTGCCCAAAGACCTTTCGCCGGAAAAGCGAACGCACTTACCACGATCATAGTCACACGGGTGCCCGTCCATATCCCTGCCCGCACTGTCCAAAAGCATTTGCAAGTCAAATCAATCGCCTACAACATATCCGCGGACACTTGGGCATCAAACGATTCTCGTGTGAATTTTGTGATATGAAATTCGTCACAAACGTCCAACGAAACATCCATATTCGTATCCATACTCACGAGAAACCTTATCAATGCGAAGAATGTGGCGAGAGATTTAGAGTAAGTGGAAAGCTGTTTTCGCATAGGAAGCGTCATGCTAACATTCGTGACTGCAAGTGCGATATATGCGGGAAGTCGTTCTTTTCAAATGCTGATGTTAAAAAACATAGAGTTGGACATTTTGAGGATCGTCCGTTTGAGTGTACTGAATGCGGGAAGAAATTTCAACGGAGGAAAACTTTGACCGCACATCAAAAGTTACATGGGCCCGAGAAGAGCTACGAGTGTAACATTTGTGGGAAGAAATTTGCGCAAGCCGCAGGACTTTGTACGCATAGGAAAACACACGGCGTAGTGGAGTTGAATACATAA
- Protein Sequence
- MSEFDIEYYYLSDSEIKGEFDFEDAENKGFEDNEEDSRFYEAKCGDIFVSNSGKYTFVCEFCSGRYEDMGSFGDHLKDTHLDYDTEEAEAEPGTELKVGNGYPDEGEETNSKEVVEEEWQSNDHDLIETPTPADFEFIGSPTSADSTLVDSDLYCTLCDRQLKTKLAFSRHKNIHKCKLIAQYLSAQALVSSDFQSNSNKVKGEELQPYGHDLKKAPTPGDSTLKETSTPAVSTLLETPTPAGSDLCCKPCNRQFKTKLAFSRHKNIHKCKLIAQYLAKKALAWSDSPKQDLTAEVSTSRDSPIEDLAAEVSTDSPRTQTEVGQFFCSFCNRYFKTRQGFKDHSVSRHGDKIPEALRDDPSHRTCKFCHMKFDKVLERVRHEETHDEDKPFRCALCPKTFRLNSQRELHNHSHTGAHPYPCPHCPKAFTTQINRLQHIRRHFGIKRFTCEYCDKKFVTNVQRNIHIRIHTLEKPYQCEECGERFRVSGQLLMHKKRHSNIRDFKCDICEKSFFAKEDVKSHRISHFEDRPFECTECGKKFQRKKNLTAHQKLHMPEKKYECNICGKKFAQCAGLYSHRKTHGVTYLNLLYKMSEYDIEYYYLSDSEIRGEFHSEEDEENKRFKATEEDSNGYEAKCGDIFVSNSGKYTFVCEFCGGRYEDMESFGDHLKDAHLDYDVEDSSTVESGTDLKVGNGYPVESGEKNLNKILEEGWQSNDHNLIETPTSADSELVKAPTPADSKLIETLTPADMGLYCKLCNRQFKRKLTFSRHRCTHKYKLITDNLTAKVLKDSSISTNSPIEEVSTQFPVKDLATKVLTDTGKKQIEVDQFFCSLCSRYFTTKLKLTDHAASRHGNNVPEALRDDSSYLSCKFCHMKFDKVLDRVDHEKTHDEEKPFRCALCPKTFRRKSERTYHDHSHTGARPYPCPHCPKAFASQINRLQHIRGHLGIKRFSCEFCDMKFVTNVQRNIHIRIHTHEKPYQCEECGERFRVSGKLFSHRKRHANIRDCKCDICGKSFFSNADVKKHRVGHFEDRPFECTECGKKFQRRKTLTAHQKLHGPEKSYECNICGKKFAQAAGLCTHRKTHGVVELNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -