Basic Information

Insect: Hermetia illucens
Gene Symbol: -
Assembly: GCA_905115235.1
Location: NC:127582708-127592480[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2.6e-06 0.00014 21.7 1.0 2 23 257 278 257 278 0.98

2 13 0.00022 0.012 15.7 3.3 1 23 285 307 285 307 0.97

3 13 0.026 1.4 9.1 0.0 2 23 322 343 321 343 0.94

4 13 0.00012 0.0066 16.5 1.1 2 23 350 371 349 371 0.97

5 13 4.4e-05 0.0024 17.8 0.1 2 23 378 399 377 399 0.97

6 13 3.5e-06 0.00019 21.3 1.3 1 23 408 430 408 430 0.98

7 13 3.2e-07 1.7e-05 24.6 1.0 2 23 437 458 436 458 0.97

8 13 8e-06 0.00044 20.2 5.4 1 23 464 486 464 486 0.98

9 13 6.6e-08 3.6e-06 26.7 0.5 1 23 492 514 492 514 0.98

10 13 3.6e-07 2e-05 24.4 1.2 1 23 520 542 520 542 0.99

11 13 0.00029 0.016 15.3 5.2 1 23 548 569 548 569 0.97

12 13 2.7e-06 0.00015 21.6 1.1 1 23 575 597 575 597 0.98

13 13 3.5e-06 0.00019 21.3 2.1 1 23 603 625 603 625 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2.6e-06	0.00014	21.7	1.0	2	23	257	278	257	278	0.98
2	13	0.00022	0.012	15.7	3.3	1	23	285	307	285	307	0.97
3	13	0.026	1.4	9.1	0.0	2	23	322	343	321	343	0.94
4	13	0.00012	0.0066	16.5	1.1	2	23	350	371	349	371	0.97
5	13	4.4e-05	0.0024	17.8	0.1	2	23	378	399	377	399	0.97
6	13	3.5e-06	0.00019	21.3	1.3	1	23	408	430	408	430	0.98
7	13	3.2e-07	1.7e-05	24.6	1.0	2	23	437	458	436	458	0.97
8	13	8e-06	0.00044	20.2	5.4	1	23	464	486	464	486	0.98
9	13	6.6e-08	3.6e-06	26.7	0.5	1	23	492	514	492	514	0.98
10	13	3.6e-07	2e-05	24.4	1.2	1	23	520	542	520	542	0.99
11	13	0.00029	0.016	15.3	5.2	1	23	548	569	548	569	0.97
12	13	2.7e-06	0.00015	21.6	1.1	1	23	575	597	575	597	0.98
13	13	3.5e-06	0.00019	21.3	2.1	1	23	603	625	603	625	0.99

Sequence Information

Coding Sequence: ATGACTTCAGTTATACAAAACGCTAAAATAGAAGGAGTTCAAATTAGTTTGGTCGCTAACGGTGGATTAACGGACACATTCGAGGAAACTGTGGAACGTGTTGGTTGCAATGGCGGAGCTGAGCTGGATCAGGACACCAAAGACGAGACGTTCATCGACGGCGGTTTACAGGGAGAATTGTCCTTTATCAGGTTTAACTCGATCTGCCGGTTCTGCCTTGTCGAAGGGGATGAGTTCCTGGAGATATTCGACACGTCCAACGGCGTCCTGGAAATGATTGCGGAAGTGTCTCCTGTGCAGATATCACTCGAAGACGTTTTACCGAAAAGAATCTGTACAGAATGCTATGCTAAACTGAAAAAATGCATTTCATTCAAACAACAAATCGAATCAGCAGATGCAACGTTAAAAGAGGCCATAAAACAGCACGCTGCGAAATACTCAGAGCATATAGCCGGAAATCTAGATGTCGCTTCACAGACCAAAGAGCATAATAATCAGTCAATCTTGGATTACGGATCGCAGCAGGGACTACAGAATGTAAGCAACTTAGATGAACTGATAGAGGAGGACTATGAAACTGGCTATATGATGGTGTACGAAACGGATCCAATCCTTTATTCCGACTGTGAAAAAGGGGCCGAACAAGTTGATGTACCAATCGTTACTTTCGCTGTAGAGGCCAACCTCGGACAAGAGGTGAATCCCGTCGTAAGTGAGCAAAATGCCGAGCAAAATCCGAAAGAGCAAAGGTCTGCAACTCCCGCCCAATGTTCTACTTGTGATAAACAATTTGCTAGTCGTGCTCTTCTGAACAAACACATGAAAGTTCATCCAAATAGAAAACTTGATCATGAGTGTCCCGTTTGTCACAAAGCCTTTCCACACGCTGCTAATTTAGAATGTCATATGATATCACACAGGAGCGAAAATGTTGACAATGCTGAATCGGAAGGGAAAATCAAGTGCAATGAATGTGAAGCTGCTTTTTCGGTTGAACGTGATTTGTACATTCACGGATCCATTCACGTGACGGGTGATAAACTCCAATGCCGGGAGTGTCTGAAGGAGTTTTCAAATCTCCCAAAACTCAGACGCCATGTCAAAACCCATTACCAGGATAAACCCATCAAGTGTGAGCAGTGTGGTCGTGGCTTTCCAGAAATGGCCTCATTAACCCGCCACTACCGTATCCACACAAACGAGCCGCGCGTACGAAAATATGCATGCGATCAATGCGGCAAATCCTACTATGATTCTCATTCGCTTTCGATTCACGTCCGTACACATACCGGTGAGAAACCATGGGTTTGCACAAAATGCGATAAACGATTCATTGACTCGCGCCTCCTCAATTCACACATGCGAACGCATATGAATGTGCGAAAGCATTCATGCACAATTTGTGAGAAAAAGTTCACCCATCGAAGTACACTAATAAGCCATGTAAGAACGCATACTGGCGAAAAACCGTTTGTTTGCACAGTTTGTAACAAGTCCTTCATCCAATCATCGAATCTAATGCTTCACCTTCGAGTTCATTCAGGCGAGAAGCCATACAAATGCTCAAAGTGTTCCAAGGCGTTTGGAAGCTCGTCAACTCTAGCAATGCATATGCGCACACATACCGGCGAAAAACCTTATTGTTGCAAGCTCTGTGGTAAACGTTTCGCGAGGCATAACTTAACGATCCACATGAGAATCCATACCGGTGAGAAACCATACGAATGTAGTGATTGCCCCCGGAAGTTCACCACTTCGGGTCAGCTAGCTCAACATAAACGATTTCACACTGGAGACAAACCCTTCACTTGTGaaatttgcaataaaagatGGTCGACCTCGTCGTATTTGAAAAAGCACATGCAAACTCATTCAATGAACGCTGGAACCTCCTACCCAAGTCGTGTTGAATCGCCGGACAGTACTGTTTTGGAGAAGGACAACCATTTCAACCATCACAGTCATCGTATTCGGATCGAGGAGATCCAAAGTGATGCAGAATTCAATGAGAATGCAATGCTAGTCAATGATTTACTTGCATCGGTGGTCAATGTGAATGCGGAAGTTCTGCAAAATGGCAATGTGGAGATTCCGGAGTTATCAACGAACGATTCGGATCAAGATTTGAACGAGCTCAGGAATGTGATGAATCCAGCAGAATTCAAAATGGAGGAACCTAAATCAGCAGAAATGGTGTCGGAAGGAGTTTACGTGACGGAAGCCTGA
Protein Sequence: MTSVIQNAKIEGVQISLVANGGLTDTFEETVERVGCNGGAELDQDTKDETFIDGGLQGELSFIRFNSICRFCLVEGDEFLEIFDTSNGVLEMIAEVSPVQISLEDVLPKRICTECYAKLKKCISFKQQIESADATLKEAIKQHAAKYSEHIAGNLDVASQTKEHNNQSILDYGSQQGLQNVSNLDELIEEDYETGYMMVYETDPILYSDCEKGAEQVDVPIVTFAVEANLGQEVNPVVSEQNAEQNPKEQRSATPAQCSTCDKQFASRALLNKHMKVHPNRKLDHECPVCHKAFPHAANLECHMISHRSENVDNAESEGKIKCNECEAAFSVERDLYIHGSIHVTGDKLQCRECLKEFSNLPKLRRHVKTHYQDKPIKCEQCGRGFPEMASLTRHYRIHTNEPRVRKYACDQCGKSYYDSHSLSIHVRTHTGEKPWVCTKCDKRFIDSRLLNSHMRTHMNVRKHSCTICEKKFTHRSTLISHVRTHTGEKPFVCTVCNKSFIQSSNLMLHLRVHSGEKPYKCSKCSKAFGSSSTLAMHMRTHTGEKPYCCKLCGKRFARHNLTIHMRIHTGEKPYECSDCPRKFTTSGQLAQHKRFHTGDKPFTCEICNKRWSTSSYLKKHMQTHSMNAGTSYPSRVESPDSTVLEKDNHFNHHSHRIRIEEIQSDAEFNENAMLVNDLLASVVNVNAEVLQNGNVEIPELSTNDSDQDLNELRNVMNPAEFKMEEPKSAEMVSEGVYVTEA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -