Hill010526.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hermetia illucens
Gene Symbol
-
Assembly
GCA_905115235.1
Location
NC:13352432-13364469[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 23 6.1 3.3e+02 1.7 0.1 5 23 65 84 61 84 0.90
2 23 0.012 0.68 10.1 3.9 1 23 222 245 222 245 0.97
3 23 0.16 8.6 6.7 2.3 1 22 279 300 279 302 0.87
4 23 0.0011 0.058 13.5 0.1 2 23 315 337 314 337 0.93
5 23 0.0013 0.072 13.2 0.6 1 23 343 365 343 365 0.96
6 23 2e-07 1.1e-05 25.2 1.4 1 23 371 393 371 393 0.96
7 23 0.0052 0.28 11.3 1.1 1 23 399 421 399 421 0.98
8 23 0.0035 0.19 11.8 8.1 1 23 427 449 427 449 0.99
9 23 6.1e-06 0.00033 20.5 0.2 1 23 455 477 455 477 0.97
10 23 1.2e-05 0.00063 19.7 2.2 1 23 483 505 483 505 0.97
11 23 1.3e-05 0.00073 19.5 1.4 1 23 511 533 511 533 0.99
12 23 0.44 24 5.2 0.1 1 23 616 639 616 639 0.94
13 23 0.0075 0.41 10.8 2.6 2 23 727 749 726 749 0.96
14 23 0.012 0.63 10.2 2.4 1 23 801 824 801 824 0.97
15 23 0.08 4.3 7.6 4.9 1 23 863 886 863 886 0.95
16 23 0.00022 0.012 15.6 0.1 3 23 900 921 898 921 0.95
17 23 0.026 1.4 9.1 3.8 1 23 927 949 927 949 0.98
18 23 1.4e-08 7.6e-07 28.9 1.2 1 23 955 977 955 977 0.99
19 23 9e-05 0.0049 16.9 4.5 1 23 983 1005 983 1005 0.97
20 23 0.00014 0.0076 16.3 3.5 1 23 1011 1033 1011 1033 0.98
21 23 0.00066 0.036 14.1 3.4 1 23 1039 1061 1039 1061 0.95
22 23 2.6e-05 0.0014 18.5 0.3 1 23 1067 1089 1067 1089 0.96
23 23 2.9e-05 0.0016 18.4 1.3 1 23 1095 1117 1095 1117 0.98

Sequence Information

Coding Sequence
ATGACTTCATCAGAAATAGTGTACGACGACATCAGCGCTCTACCAATGAAATACATAAGCGAATTGGACGAGCCGAAATACCTCATAGCAAGCGCCAAACTGGGAGACAATCTGTGTCCTGACACCGAACCCAATACAAAATGTGGGGAGATACTTTTAGAATATAATCAAAAGTTTATCCTCGTGTGTATATTATGCACGAATAATTTCGAGACCTTAGAAGACTTCGGCAATCATGTGCGCAGTGAACATTTGAATCCTAAGACGTATACTGAACAGTGTCCTTTGGTGGAGGAGTCGTTTCAGGAGGCTAATAGCGACGGGGAAGTTTCACAGGATTCTAAGGATGACATTTACTCAGTAGAATTAGAATTTTTAAAGGACGAGGACTGTGTAGATTTGGaagtattaaatgaaaaagaGTTCGAAACGCTAAGCGATGGTGACATGGAAGCAAACCAAGGCGACCAAGAGCTCGAAACTTTAAGCGATGATGATCAACCGTCCGATGGAGACGCGGCGCCAAACCAGGACGACCAGAACCTCGAAACCCTAAGCGATGATGAACAACCGTCTGATGAAGAAATGGATCAACACCAAGATGACCAGGACCTTGACGAAGGAGCTAATGAATCATTAGCGTCATTGAAGCTAGAGAAAATGTTTTCCTGTACATTATGTAACGCGAAATATAGACACAAACGGTCATACTTCGCGCACGCCAGAAAAGAGCACGGTATCCTTACAAAGCGAATGAAAGACAAACTGGAAAAGAAAGCTAACGAGGTCCTCCAGAAGGAGGGTGATAGCGATAGTGCTGGAAGTGGTCAGATTTTCTCCTGCAATTCATGTAGCAAAATCTATCGGCATAAAAGATCCCTACGGTTTCATGTTCTAGCAGTTCATGGTTATAAATGCCTGAGTCCGATTCCTAACGAAACTCAATGCAGATACTGCGGTGAAGGATTCGAAGGAAGAGAGGAACTAGAAACACATATGGATGAAAAACACTCAGGAGACAAGAAATATCCCTGCCCATTTTGTGATAGATACTTTAGTACTCCCAATGGTCGTCAAACTCACATTTACAACCACACTGGCGAACGTCCTTATAAATGTCCGCATTGTTCTAAGGCATTTTCTGTGTCCTCCAATCTCAAAAAGCACATAGACGCTCACCTGAAGATCAAAAAGTATTCATGCCAATTCTGTGGGAAATTATTTGTTCAAAGTACCGAACGAAATATTCACGAGCAAAGACACACCGGCGACAAACCATTCCAATGTGAAGAGTGCGGGAAACGTTTCCTGACACATACTCAGCTTTtacatcatcatcgacggcatCAGAACATTCGAAAATTCAAGTGTGAAGTGTGTGACAAAGCGTTCTTTACCTCAACCGCTTTAAAGGAGCATATGGCCGGACATTCGGAGGCTCGGCCATTCGAGTGTACAGAGTGCGGACAGTGCTTCCCCAGGCGCAAGTCTTTGAGGCAACATGCAAATCTCCATTCGAAAGTGAAAAAGTACGTTTGCAACACATGTGGAAAGGCGTTCGCTCAATGCGCCGGACTTTATTCGCATAGGAAAACTCATGGAGAAATCGTCAAGAGTAAATCAAAACATGAGTGCTTGACCATGGAGTTTCCACCAACAAAAATGGATAATGCATCACAGTCAACAAATCGACAACCAGATGAGGTACTTGTTAAGGAAGAATTCGATGTGGAAGACATTCAGGAAGCGAAAACTCCTCTGAAATCGGAAGGGAACCAGATGATCCTTGCTTCGCCTGATGCGAaatgtggtgaagtgttcctggGGTGCAAAGGTAGCTTCACGTTTGTGTGTTCAATTTGTTCCAACTATTTTGCGGATTTGGAGGTCTTTGGCACTCATATCCGGGACCTGCATCTTAAATTCAATACCGAACTAGGAGGCAATGCCGGCGAGAATAGGATTGTTGAAAGTATTCGACAGGATCCCTTGAGTCATTCACCGTTCATGGGGAAACCTTGCACAGAAGAGGTTTTGTTGACCAGTACGCCCATGGAAGATGAAAATGGGGAGGAGCCTAAAgtggaaaattcaaaaattgcatATACAAACGGGGAAAGGAACCTTGAAGCCGAGGATCGAAACTCACAAACACCAGATGAAGCAAAGACATTCATTTCCTGTAGATTATGTGGAAAGACCTACATACACCATAGGTCCTACCTTGCACACGCGAGGAAAGTTCATGGTATTTTAACCAAACGCATGAGAAACAAATTGAGACGTGAAGCTAGAAAATCGTCACAAGATACCGTGGTCAGCCCAGAAGTACAAGAAAACCAAGAGGGAAACTCAGTCCAAAATGAAAACGACGACTCGGTTAtggctgaaaaagaaaaattcagcTGTGCCCTTTGTAATCGCTCATATAAGTACAGAAGGTCGTTGCGATTCCACGTCAGGACGGACCATGGTGATGAAGCGTTAAGTCTCATCCCCCGACCAAAACCtgtagaagatttgaagccaatAGATTCCATTTACGAGGAAGACGGCGAAAGTTCACCTCTGGAACCAGAGGAAGATCACCCCTGCAATCTGTGTAACCGGATCTATAGACATAAAAGATCTCTGCGCTTCCATATTAAAAACGACCACGGAGAAGAGGCGCTGGGTCCGCCTCAAAGTGAAACAATTTGTAAATATTGCGACAAAGAATTTAACGATGAGGACACTCTCGACATTCATATTGAAAGCGACCATCCTGGTGATAAAAAGTACGTTTGTCCTCATTGTTCGAGGGCCTTCAAATGCAGAGCCACCCGACAAGAACATATTAACACGCACACAGGCGAGCGCCCCTATAAATGCCCGCATTGCTCGAAAGGATTTTCAAACTCATCAAATCTCGCCGTACACATCCGGATGCATCTTCAAATCAAAAACCATTCCTGCTCATTCTGTGGTAAACGATTTGTATCGAGTAGTGAAAAGAAACGTCACGAACGAACCCATACTGGTGAAAAACTCCATCAATGCGAGGAGTGCGGGAAGCAGTATGCATCCCTGCATAAGCTCAATGATCACCTGAAACGGCATAAAAACATCAAGAATTTCAAATGCGATGTTTGCAGTAAGACATTTTATACATTACACATGCTTAAGGATCATAAATCGGCACATTCTTCGGAACGACCCTTCAGTTGTGATATTTGCGGTCAACGATTCCCAAGACGAAGAGCATTAAGGGTACACGAGCAACTCCATTCCGATGTTAAGAAATACGTTTGTAATACTTGCGGGAAGGCATTTGCCCAATGTGCTGGACTCTACTCACATCGCAAGTCTCATGGAGAAATAAAATAG
Protein Sequence
MTSSEIVYDDISALPMKYISELDEPKYLIASAKLGDNLCPDTEPNTKCGEILLEYNQKFILVCILCTNNFETLEDFGNHVRSEHLNPKTYTEQCPLVEESFQEANSDGEVSQDSKDDIYSVELEFLKDEDCVDLEVLNEKEFETLSDGDMEANQGDQELETLSDDDQPSDGDAAPNQDDQNLETLSDDEQPSDEEMDQHQDDQDLDEGANESLASLKLEKMFSCTLCNAKYRHKRSYFAHARKEHGILTKRMKDKLEKKANEVLQKEGDSDSAGSGQIFSCNSCSKIYRHKRSLRFHVLAVHGYKCLSPIPNETQCRYCGEGFEGREELETHMDEKHSGDKKYPCPFCDRYFSTPNGRQTHIYNHTGERPYKCPHCSKAFSVSSNLKKHIDAHLKIKKYSCQFCGKLFVQSTERNIHEQRHTGDKPFQCEECGKRFLTHTQLLHHHRRHQNIRKFKCEVCDKAFFTSTALKEHMAGHSEARPFECTECGQCFPRRKSLRQHANLHSKVKKYVCNTCGKAFAQCAGLYSHRKTHGEIVKSKSKHECLTMEFPPTKMDNASQSTNRQPDEVLVKEEFDVEDIQEAKTPLKSEGNQMILASPDAKCGEVFLGCKGSFTFVCSICSNYFADLEVFGTHIRDLHLKFNTELGGNAGENRIVESIRQDPLSHSPFMGKPCTEEVLLTSTPMEDENGEEPKVENSKIAYTNGERNLEAEDRNSQTPDEAKTFISCRLCGKTYIHHRSYLAHARKVHGILTKRMRNKLRREARKSSQDTVVSPEVQENQEGNSVQNENDDSVMAEKEKFSCALCNRSYKYRRSLRFHVRTDHGDEALSLIPRPKPVEDLKPIDSIYEEDGESSPLEPEEDHPCNLCNRIYRHKRSLRFHIKNDHGEEALGPPQSETICKYCDKEFNDEDTLDIHIESDHPGDKKYVCPHCSRAFKCRATRQEHINTHTGERPYKCPHCSKGFSNSSNLAVHIRMHLQIKNHSCSFCGKRFVSSSEKKRHERTHTGEKLHQCEECGKQYASLHKLNDHLKRHKNIKNFKCDVCSKTFYTLHMLKDHKSAHSSERPFSCDICGQRFPRRRALRVHEQLHSDVKKYVCNTCGKAFAQCAGLYSHRKSHGEIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-