Hill010936.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hermetia illucens
Gene Symbol
-
Assembly
GCA_905115235.1
Location
NC:44804211-44829038[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.00017 0.0095 16.0 0.2 1 21 135 155 135 156 0.95
2 22 0.0023 0.12 12.4 0.5 1 23 234 257 234 257 0.93
3 22 0.14 7.6 6.8 3.3 2 23 275 296 274 296 0.93
4 22 1.2e-05 0.00066 19.6 1.2 1 23 302 324 302 324 0.98
5 22 1.2e-07 6.6e-06 25.9 0.5 1 23 330 352 330 352 0.99
6 22 0.0019 0.11 12.7 1.8 1 23 358 381 358 381 0.96
7 22 5.8e-06 0.00031 20.6 0.1 2 23 388 409 387 409 0.96
8 22 4.7e-06 0.00026 20.9 0.6 2 23 416 437 415 437 0.95
9 22 0.00065 0.035 14.2 0.5 3 23 445 465 443 465 0.97
10 22 1.5e-05 0.00082 19.3 0.1 1 23 471 493 471 493 0.99
11 22 2.9 1.6e+02 2.7 0.2 3 23 605 626 603 626 0.92
12 22 0.0019 0.1 12.7 2.9 2 22 745 765 744 765 0.95
13 22 2.1 1.1e+02 3.1 1.9 6 23 784 801 780 801 0.92
14 22 0.00018 0.0095 16.0 2.3 3 23 835 855 833 855 0.95
15 22 0.29 16 5.8 1.0 2 23 870 891 869 891 0.96
16 22 0.0051 0.28 11.3 0.4 1 23 897 919 897 919 0.92
17 22 0.56 31 4.9 1.0 1 23 925 948 925 948 0.93
18 22 4.8e-06 0.00026 20.9 3.3 1 23 954 976 954 976 0.99
19 22 2.3e-05 0.0012 18.7 0.2 1 23 982 1004 982 1004 0.98
20 22 1.5e-05 0.00081 19.3 1.8 1 23 1010 1032 1010 1032 0.98
21 22 3.7e-05 0.002 18.1 0.6 3 23 1040 1060 1038 1060 0.97
22 22 3.5e-05 0.0019 18.2 0.1 1 23 1066 1088 1066 1088 0.98

Sequence Information

Coding Sequence
ATGGAAGCCGCAGAAAACGACGTTTCCGTGAAAAAGGAACCTCTAATTaaatgtgaactcgaagagctaAATGATCAAATGAAATGCGGCGAAATATTTGCAGTTTTCAGTGGAAATTTCGTGTTGATCTGCGGATTTTGCCaaggaaaattcgaaaatatgCTAGACTTTGGAGCACACATCAAACAAAAGCACGAGGAGGACATGCAAGTAATAGATGAATATCTGAAATCAAAACTAGAAGTTAACACAAGTGTGGGAAAGATTGAAGTTGATGTCATCTCTGATGAGCGGGAAGAGTCCTTACACTCTTTTGGAGATGGCTTAGAGCCTAAATCTGATGTCGAGTCAGACGGAGAAGGGACCAGAAGTAATACAAACGAAGCGGGTGAACAGGAAAAGTATACTTGTGACGCCTGCGGTGAGTCTTACAGTTCAAAGGCCGACCTGCAAACCCATCACAAAGTTGAATGCAAACGGAACTCGCCAGAAATCGCCGACAATGCTAACGAAACACAGCTTAAAATCACTAGTCATACAAAACGACAAAGGAAGCGGAAGCATAAAGATTTAGCAACGCAGGATGAGCAACCCATTGATGGCAAGGATGAAATGCAAGACGAACAATCATCAGCAGAAGATCATACCGTCCACAAGGAGAACAAATCAAAGGCAAACCGTTCGGCGACTAAGAAGCAGTTCCCTTGCGAGTCCTGCGAGCGAGTATTCAAATCTAAACAATCCCTCTCCTATCATGTCGGTCGAGAACATAGCGACACCACACTTGCGCCAGAACCAAATCCAGACGATCCCCAATCACTGCGGTGCAAATATTGCAATCAAGAGTTCAACACAAAGGAGGAATGCTCGGAACACGAAAGTACTCATAGCGGAGAAAAACCTTACATTTGTTGGTACTGTAACCTGACATTTAAAACAAGCAGCGGCCGAAAGCGACACATTCGGATTCACACGGGCGAACGACCCTTCCAATGCAATGAATGTCCTAAAGGTTTTGACAACAAGGACCAACTCGAATCTCACATTCGTAAACACAAAAACCCTCGCAAATTTACATGTCAAACGTGTGGCGAGTCGTTCTTTCGGAGGTTCCAGTTGGGCTTACATGAGCAGCGCCGACATACTGGTTTTCGTCCGCTGGTTTGTGAGGATTGCGGCAAGAGTTTTGTAACGATGGGCGAGCTGACGCAGCATAGGATACGGCATTCGGATGTGAAAGATTGGAAGTGTGAGGTATGCGGGAAATGCTTTTACTCCAAATGGGCCTTGAAAGATCACATGGCCGGTCACTCGGATGAGAAGCCGTTCGGCTGTGAAGTATGCGGTCGATGGTTCTCCAGACCCAAAGCACTCAAGAAACATAAGAAACTGCACTCGGATGTTAAGGCGTATGTTTGTAATATTTGCGGCAAGGCATATGCACAGGATTCGGGACTGTATGCGCATAAGAAAACGCATGGTATTAGAAATGATCAACCACCTACAAGCTTTACCGTGAATGCACATTCCGTTTCACTCACAAAAGAGTTGTCAAACCGGACGAAAACAATTATCCTAACGTCATGGAAAGTGAGTTTTGAAACAAATTCCCTTGCAAAACGGCGCTTAATTGCAATGGACTCGAGCAATTTTGAATTCGTTAAAACCGACGCGCAAGACGTCAACATAAAAAATGAGCCATTCGATGAAATGCTGGCACCTGAAGTGAAATTATTCACAGACAGTGGCGACGTTGGCAAGTCGAAATGTGGCGAGATTTTCACATTAAACAGTGGAAATTTCGTTCTGATATGTGCATTCTGCAATGCCGAATTCGAGAATATGCGATCGTTTGGCTCACACGTGCGGGATAAGCACGAAGGAAGATGTGCAGAAATGGTAGCAATGGACATATCGGCATTGACCCCAACAGCGACAACGACGGCCATCAAACATCCGCCGCAAGAGGTCGAGAAAGATAGCATTGACAACATACTCGGTGGCCATTTCGATGCTCAGGATCTCGAATTACCAACTAAGAAGGAATCTAGCGAACAAGAGAATGTAAAAGCGACGGAGGGGGAAGAAGTGGCGCAGACTTTCGATGAGGACGACAATATTGGGGACAACGACGGGGACGATGAGAGCTTCAAAGTGCCGTCTGAAGCCAGCTGTTCGGAATTTAGTGAAATCGAAGAGGACAGTAAAGCAGGAAAAGGGACTGGATCCTTGAAATGTGACTCATGCAATaggaaatataaaaacaaaaggaCTTTATACAGACATCAGAAAACTACAGGGTGTACGCAGGACGATAAGCCGGCCGACCCGGAGTTGTTCTGCGTGCCGTGCAACAGGCAGCTCAAGACGAAAAAAACATTTGCCAGGCATAAAAAGGCCCACGAGAACCGGATAAAGAAGGAACTAGACGAGAACTCTGGAGTGGAGGAAGGGAACTCGGCCAAATCCAAATCGGACACAGTCCAAGATCCCTCGTTGTTCTGCGAGTTTTGCAATCGTTACTTCAAGACGAGGTCAAATCTTCGAACACACGCCGAAAGACACGACACCATACCCATTGCACTGCAAGGCGATCCTGAGTTCCTGAAGTGCAAATTCTGTGATGAACCGTGTCCTGATTATGCCGCCCGCAAAACTCATGAATCCACCCACTCGGGAGACCATCCGTACATATGTAAGATATGCCAGAAGACGTTCGCCACCATCTATAAGAAAAACATCCATGTCGCCCTTCACACCGGCGAACGGCCACACCAATGCCCGCAGTGCCCCAATGCTTACCTTACCAAGCGTGACGTTCTCCGACATATCACCTATCGGCACCTGAACGTGCGGCGATTCAAGTGCGACCTCTGTGACAAGAGTTGCTACCGCAAAACCGAACTTGCAATTCACATGCGTCGCCACACCGGTGAGAAACCGTACGTGTGCGAAGATTGCGGCAACAGCTTTGCTGCACTCAGTCAACTGAAGAGCCATCAGTTGCGGCAcacacaaacgaagaacttcaaATGCGACCAGTGCGGTCGTTTCTTCTATTCGAGTACGAGTCTCAAGGATCATCAGGCATCACACTCGGACGCCAAACCGTTCGGATGCGACGTGTGTGGCAGGAGGTTCCCACGGGCGAAGGCGTTGAAAAAGCACAAGAAGCTGCATTCGGACGTGAAGGCGTATGTTTGCAATATTTGCGGGAAGGCATACGCACAAGACTCGGGATTATATGCTCATAAAAAATCACATGGTCTGTTCTCAAATCCTCAAGGAACGCAGTTTACAGTTCCCCTCacgtaa
Protein Sequence
MEAAENDVSVKKEPLIKCELEELNDQMKCGEIFAVFSGNFVLICGFCQGKFENMLDFGAHIKQKHEEDMQVIDEYLKSKLEVNTSVGKIEVDVISDEREESLHSFGDGLEPKSDVESDGEGTRSNTNEAGEQEKYTCDACGESYSSKADLQTHHKVECKRNSPEIADNANETQLKITSHTKRQRKRKHKDLATQDEQPIDGKDEMQDEQSSAEDHTVHKENKSKANRSATKKQFPCESCERVFKSKQSLSYHVGREHSDTTLAPEPNPDDPQSLRCKYCNQEFNTKEECSEHESTHSGEKPYICWYCNLTFKTSSGRKRHIRIHTGERPFQCNECPKGFDNKDQLESHIRKHKNPRKFTCQTCGESFFRRFQLGLHEQRRHTGFRPLVCEDCGKSFVTMGELTQHRIRHSDVKDWKCEVCGKCFYSKWALKDHMAGHSDEKPFGCEVCGRWFSRPKALKKHKKLHSDVKAYVCNICGKAYAQDSGLYAHKKTHGIRNDQPPTSFTVNAHSVSLTKELSNRTKTIILTSWKVSFETNSLAKRRLIAMDSSNFEFVKTDAQDVNIKNEPFDEMLAPEVKLFTDSGDVGKSKCGEIFTLNSGNFVLICAFCNAEFENMRSFGSHVRDKHEGRCAEMVAMDISALTPTATTTAIKHPPQEVEKDSIDNILGGHFDAQDLELPTKKESSEQENVKATEGEEVAQTFDEDDNIGDNDGDDESFKVPSEASCSEFSEIEEDSKAGKGTGSLKCDSCNRKYKNKRTLYRHQKTTGCTQDDKPADPELFCVPCNRQLKTKKTFARHKKAHENRIKKELDENSGVEEGNSAKSKSDTVQDPSLFCEFCNRYFKTRSNLRTHAERHDTIPIALQGDPEFLKCKFCDEPCPDYAARKTHESTHSGDHPYICKICQKTFATIYKKNIHVALHTGERPHQCPQCPNAYLTKRDVLRHITYRHLNVRRFKCDLCDKSCYRKTELAIHMRRHTGEKPYVCEDCGNSFAALSQLKSHQLRHTQTKNFKCDQCGRFFYSSTSLKDHQASHSDAKPFGCDVCGRRFPRAKALKKHKKLHSDVKAYVCNICGKAYAQDSGLYAHKKSHGLFSNPQGTQFTVPLT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-