Hill009481.1
Basic Information
- Insect
- Hermetia illucens
- Gene Symbol
- -
- Assembly
- GCA_905115235.1
- Location
- NC:44835769-44844915[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 1.2 68 3.8 0.6 3 23 69 90 67 90 0.94 2 23 7.3e-06 0.0004 20.3 2.0 1 23 294 317 294 317 0.97 3 23 0.028 1.5 9.0 2.7 3 23 331 351 329 351 0.96 4 23 0.38 21 5.4 3.3 1 23 377 399 377 399 0.90 5 23 0.99 54 4.1 2.1 2 23 414 435 413 435 0.97 6 23 3.1e-06 0.00017 21.5 0.6 1 23 441 463 441 463 0.99 7 23 7.6e-06 0.00041 20.2 3.3 1 23 469 491 469 491 0.97 8 23 9.9e-07 5.4e-05 23.0 0.6 3 23 499 519 497 519 0.98 9 23 0.00017 0.009 16.0 0.0 1 23 525 547 525 547 0.98 10 23 0.00046 0.025 14.6 0.2 2 23 554 575 553 575 0.93 11 23 2.6e-06 0.00014 21.7 0.8 1 23 581 603 581 603 0.98 12 23 1.7e-05 0.00091 19.2 0.1 1 23 609 631 609 631 0.99 13 23 0.0013 0.073 13.2 2.5 1 21 786 806 786 807 0.94 14 23 0.00033 0.018 15.1 2.9 3 23 824 845 823 845 0.97 15 23 0.0016 0.087 12.9 5.1 1 23 935 958 935 958 0.97 16 23 0.099 5.4 7.3 2.2 2 23 976 997 975 997 0.94 17 23 0.00014 0.0077 16.2 3.5 1 23 1003 1025 1003 1025 0.98 18 23 3e-05 0.0016 18.4 1.2 1 23 1031 1053 1031 1053 0.99 19 23 0.0001 0.0056 16.7 2.9 1 23 1059 1081 1059 1081 0.98 20 23 8.4e-06 0.00046 20.1 0.3 2 23 1088 1109 1087 1109 0.97 21 23 6e-06 0.00032 20.6 1.0 2 23 1116 1137 1115 1137 0.95 22 23 1.7e-05 0.00091 19.2 1.6 3 23 1145 1165 1143 1165 0.97 23 23 1.7e-05 0.00091 19.2 0.1 1 23 1171 1193 1171 1193 0.99
Sequence Information
- Coding Sequence
- ATGTCCCATCCAGtggaagcacagtctcatttAGAACGGAATGTCTTGGGACACAATAAAAACTCCGTACCTGAATACGACGAGTCCAATAAGACAGaaattaaagaagaaataaCAAATGACATATTCGATGAGCTTGAAATCAGCACGAAAACAAAGTGCGGGGAAGTCTTCACCTCCTACAGTGGAACGCTTGTGCTCATCTGTGCTTTTTGCAATGGAAAGTTCGATAACATGCACTCGTTTGGGGTGCACATACGTGAACAACATAATTGCCACCTAACAAGAGAGCAGCAGATCGACACAGAAATCGTAAGTGCAAATCCTCTTGTAGCGAAAGCCGAACCGGAAGAAAGTactgaaaacagaccaaatAATGGAGACAATTCAGGAGAGTCTGCGATAACAAGGACAGAAGTGTCTTCAACCGAAAGTCAGCCTTATCCCAACTGTATTGGAGGCCAGAAATTATGTAGGGCTAGACGGAATTTGAAAAGACAGTTGCATACGGACTCTATGCCAGTTGACCAAGCCGAGGAGCCAGTGAAGAGAAAGAGGAGGATTGGAAAGAAAAGTGGTCCCCTTGTGGAACAACCAGAACAGATTTCGAATCAATTCTCACGAGATCTTATCAAAAGTGAAGCTACACAACCTGGTAAACTCACTTTAACTCAGAACTTGCCTTCACAAGCCGATGGTTGGTTAAATTCTACAGGGGATCCTTCCAATAAAAGTTCTACTGAATTTCCTTCGGGGAAATACGTTTTTAACTATGATGATGACTCAGATGAATCTCAAGGTTGCAATGATCCCGACGAAAGAAGCTCCATATCATCATCTGAAACCGACGTTAGAGCGGATACGAGCGCGACTGAAACGTTCCCCTGTAATCTTTGTAGTCGAACTTACAGAAGCAAGAGGAGTTTAAACCGGCACCTAAGGAAGCCACATTTGTCCAGTGACGAAGTACCTACAATGCAGGAATGGTTTTGTGTATCGTGCAACAAACAATTGAAATCTAGACGAACGTGGCAACGACATCAACGAAAACATAAACTGGAAGACAACCCAGGCGAGCAGGCGTCCGAACAGAATGACGTGGCACCAGATGATGTCAAAATCCCCGAATTCCACTGTGACCTATGTAATAATTACTTCAAGACAAAATTCAGTCTATATATTCACTCCGATGCACACGACACTCTGCCAGCCGTCTTACAGGGAAATCTGGATTTCCTGAAATGTAAGTTTTGTAACCAACAACTTCCCAAGTATGCTGAGCgaaaaaaacacgaaaaaaCTCATACAGGTGCTAGACCATATGAATGTCCTTACTGCGAAAAAGGATTCTCATCGAATTATGACCGGAAAATACACATTCGTTCCCACACAGGTGAATTCCAGTTCGAGTGTCCCCACTGCCCCAAAGTTTGTACAAATAAAACTGATCTAAAGCGACACGTAGTGCGCCATTTGAATATCCGGAACTTCGGATGTGAATTGTGTGACAAGCGTTTCTATCGACCCTTTGAACTCGCCCGCCACATGCGAACCCATACAAAGGAACGCCCCTACGTTTGCGAAGACTGCGGTGCCACGTATCCGGTACTAGCTCAGCTTAAAGATCATCAGCTGCGGCACAAGGGCGTAAAGAATATCAAGTGTGAGATATGTGGGCGACTGTTCTACTCCAAAAGTGTCCTGAAAGTCCATATGCCCACGCACTTTGACGAAAAGCCCTTTGAATGCGATGTATGCGGGCGCAAGTTTTCGCGGGCGAAGGCAATGCAAAAGCATCAGAAATTGCATTCAGGCGAGAAAAAATATGTGTGCAATATTTGCGGGAAAGCTTACGCGCAGGATTCTGGTCTGTATGCACATAAGAAAACACATGGGGCAAATGTATATAGTTTGAATAAAATGGGTGACTTAAATTTCGAATTCATTAACCCCATGACGGATGCAGTGGAGTGGAATGCATCTGTTAAGGACGAACCCGCAGAAACCAAGGAAACTGAGGAATTGAAGGAAGAGACCAAATGCGGCGAAATATTTGCCCTATACAGTGGAAATTTCGTCCTTATTTGCGGATTTTGCCATGGCAAATATGATCAAATGCTTGATTTTGGGAACCATGTAAAAGAAGAACATGAGGACAAGATGACGATCCGAACAAACTGTCAACAGGAAAATCCGGTTACGAAAATTGAAGATGAATTTACCAATCAGCAGGTGGACTCCCTACATAAATTAGAAGCTGTACCTGATGCGAAAGTAGACGGAGACCCAGGCGACACTGAAAATTCTAGCGAAGGGACCCCCACTTCTAGGCGTAAACCGAAGAAGCCGCAGAAATTTGCTTGTAACTCCTGTGGGCAAACCTACAAGCATAAAGCCAGCCTGCACACGCACCAAAATAGGACGAATTGTAAACGAAATACCCCGGAACCGAAagattctgcaaatttctgcccACTTTGTAAGAAAAGCTTCAAGAGTTTGATGTATCTTAATAAGCACAACCGCCGCTTCCATGGACAAGGCGAAACGTCGGATCAAATGACCCCGAAATCGGCGGATGTAAAACACGAAAAAAGCGACAATAATTGTGATAACCTAGTCGAAGATTCCTCTTATGTCCATGATAGCATTCCAGAAGTTATAGGCGAAACAAATAAACTTGCAGATTCTATGGAAGACAATTGTTGGTCAAATGATTTTGATGATGTCAAGGACGAGCTCAGCGGTAGCGATGCAGACCCTTCAGGTGCGAAACCTGACAATAAGACCCAATTAAAGGAATTTCAATGTGAGCATTGTAGTCGAGTATTCAAATCAAAGCGATCACTTTCCTTCCATATGAACCGGCAACACGATGAAGTATCTAATAGCGCTAAGCAGGAGGGACAGAATCCACAGTTCCTTCGATGTAAGTACTGCAATCAAGAATTTCCGACGAAAGTGGAGTGTAGTGAGCACGAAAACactcatgtgggtgaaaaacgCTTCATTTGCTGGTACTGTCCCCATAAGTTCCGCACAAATTACGGACGAAAGCGACACATGCGAGTGCATACAGGCGAGCGACCCTACAAATGCACTGAATGTCCCAAAGCGTTCCCGCATATGGTTCAACTCGACTATCACATCCGAAAACATAAAAACCTACGCGAATTTAGCTGTAAAACCTGCGGTAAGGAATTCTTCCGCAAATTCGAGCTAAGCTTACACGAACGACGGCACACCGGCTTCCGCCCACTGGTCTGCGAAGACTGCGGAAAAACATTCAATGTAATGAGCGAATTGAACGAGCACAGGAAGAGACACACGGACGTGAAAGACTGGAAATGTGAGGTATGTGGCAAGTGCTTCTATTCCAAGTGGACGTTGAAGGATCACATGGCTGGGCATTCGGGTGAAACACCGTTTGGCTGTGAAGTTTGCGGACGCAAGTTCTCTAGGTCTAAGGCATTGAAGAAGCATAAAAAACTTCACTCGGACGTCAAGGCTTATGTTTGCAATATTTGTGGAAAGGCCTATGCACAAGATTCGGGACTGTATGCACATAAAAAAACACACGGTATACGAAATACACACTCGGAAGCATTTAGTACTGTGAATAAAAGTCTGTAA
- Protein Sequence
- MSHPVEAQSHLERNVLGHNKNSVPEYDESNKTEIKEEITNDIFDELEISTKTKCGEVFTSYSGTLVLICAFCNGKFDNMHSFGVHIREQHNCHLTREQQIDTEIVSANPLVAKAEPEESTENRPNNGDNSGESAITRTEVSSTESQPYPNCIGGQKLCRARRNLKRQLHTDSMPVDQAEEPVKRKRRIGKKSGPLVEQPEQISNQFSRDLIKSEATQPGKLTLTQNLPSQADGWLNSTGDPSNKSSTEFPSGKYVFNYDDDSDESQGCNDPDERSSISSSETDVRADTSATETFPCNLCSRTYRSKRSLNRHLRKPHLSSDEVPTMQEWFCVSCNKQLKSRRTWQRHQRKHKLEDNPGEQASEQNDVAPDDVKIPEFHCDLCNNYFKTKFSLYIHSDAHDTLPAVLQGNLDFLKCKFCNQQLPKYAERKKHEKTHTGARPYECPYCEKGFSSNYDRKIHIRSHTGEFQFECPHCPKVCTNKTDLKRHVVRHLNIRNFGCELCDKRFYRPFELARHMRTHTKERPYVCEDCGATYPVLAQLKDHQLRHKGVKNIKCEICGRLFYSKSVLKVHMPTHFDEKPFECDVCGRKFSRAKAMQKHQKLHSGEKKYVCNICGKAYAQDSGLYAHKKTHGANVYSLNKMGDLNFEFINPMTDAVEWNASVKDEPAETKETEELKEETKCGEIFALYSGNFVLICGFCHGKYDQMLDFGNHVKEEHEDKMTIRTNCQQENPVTKIEDEFTNQQVDSLHKLEAVPDAKVDGDPGDTENSSEGTPTSRRKPKKPQKFACNSCGQTYKHKASLHTHQNRTNCKRNTPEPKDSANFCPLCKKSFKSLMYLNKHNRRFHGQGETSDQMTPKSADVKHEKSDNNCDNLVEDSSYVHDSIPEVIGETNKLADSMEDNCWSNDFDDVKDELSGSDADPSGAKPDNKTQLKEFQCEHCSRVFKSKRSLSFHMNRQHDEVSNSAKQEGQNPQFLRCKYCNQEFPTKVECSEHENTHVGEKRFICWYCPHKFRTNYGRKRHMRVHTGERPYKCTECPKAFPHMVQLDYHIRKHKNLREFSCKTCGKEFFRKFELSLHERRHTGFRPLVCEDCGKTFNVMSELNEHRKRHTDVKDWKCEVCGKCFYSKWTLKDHMAGHSGETPFGCEVCGRKFSRSKALKKHKKLHSDVKAYVCNICGKAYAQDSGLYAHKKTHGIRNTHSEAFSTVNKSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -