Basic Information

Gene Symbol
ZNF219
Assembly
GCA_905115235.1
Location
NC:143628355-143645181[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.28 15 5.9 1.4 1 23 104 127 104 127 0.95
2 20 0.0024 0.13 12.4 2.2 1 23 133 155 133 155 0.96
3 20 0.0006 0.033 14.3 2.0 3 23 162 182 161 182 0.98
4 20 0.013 0.73 10.0 0.3 2 23 189 211 188 211 0.94
5 20 7e-09 3.8e-07 29.8 1.3 1 23 245 267 245 267 0.98
6 20 6.5e-06 0.00036 20.4 3.2 1 23 273 295 273 295 0.98
7 20 9.7e-07 5.3e-05 23.1 0.5 1 23 301 324 301 324 0.98
8 20 0.00091 0.049 13.7 1.5 1 23 334 357 334 357 0.93
9 20 0.00021 0.011 15.7 4.7 1 23 459 481 459 481 0.98
10 20 3.4e-07 1.8e-05 24.5 0.3 1 23 487 509 487 509 0.99
11 20 0.0016 0.088 12.9 0.4 1 23 520 542 520 542 0.98
12 20 1.8e-06 9.6e-05 22.2 2.9 1 23 548 570 548 570 0.97
13 20 4.9e-06 0.00027 20.8 1.0 1 23 606 628 606 628 0.95
14 20 2.2e-05 0.0012 18.8 2.6 1 23 634 656 634 656 0.97
15 20 0.0004 0.022 14.8 2.6 2 23 663 684 662 684 0.97
16 20 0.0014 0.075 13.1 4.3 1 23 690 712 690 712 0.96
17 20 2.4e-06 0.00013 21.8 0.6 3 23 841 861 840 861 0.97
18 20 0.071 3.9 7.7 5.5 1 23 867 889 867 889 0.98
19 20 2.7e-06 0.00015 21.6 0.1 1 23 896 918 896 918 0.97
20 20 1.2e-06 6.5e-05 22.8 5.9 1 23 924 946 924 946 0.99

Sequence Information

Coding Sequence
ATGGATCCTGGTCCTCACACTTTATATTCGGTCTCCGATTCACAGACTATGATTATTCCCTTGGATGAAACGAATTTATCAATCTTTGGGACGCCTGTAACCGATTCCTCTTCATTTGATCGGTTCATCAACGATTCATCTGCTGCGTCGTCAGTTAACCCGGCCATTGACGGCACCACAGCCCGTCTACATTCGCCACCATCTCCACCTGGATCTGCTCCATCAACCAAGGCGACTCTTAAATATAAAAAGTGTCGAAAGAAGCACATCCAAAGCTCCACGGCATCTGCAAACCGCCTTCCGAGGACTTACAACTGTGACCTATGCACTGAAAAGTTCCATCTTCCAAGCCTTCGTCGTCTACACAGAGAGACTGCTCATTCGTTGCCGAAGCCTTTCAAGTGCGAGAAGTGTCCTAAGCGATTCAACTCCGAAGAGAACTGTAGAATCCATGTTGCCAGCCATTTGGAAGCACCAGCTGCATGTCCTGAGTGTGGTGCTTGTTTTCAACGTTCGACACGCTATCGCAGCCATCTGAAAACTCATATGAGGAATGAAGATCTCTATTGCGAGGAATGCAACCAGAATTTCGAGAATGAGAACGTGTTTTGGCGGCATATTGATATGAAGCATTCTCACAGTACAATGGGCGTTGAGTACGATGATTTGACCGGGGGAATTATGCGGAAGggTAATGTTGGCAGCTCGGCAATGGGCGAGGAAATAGGGAGATTTCAGTGCAATATTTGCGAAAAGTCCTTTACGAGGTCCAGCAATTTAACGAGACATCTTCTGATTCACACGAAAACTAAACATTATCAGTGTACGAAATGCTCGATGAACTTTACCCAGAAATCCACTTTGCGGCGACATTACCTTATTCATTCCGGGGCAAAAGAATTCAAATGTCCAAAGTGTTCTGCACGATTCTCACAACGTGGAAATCTCGAAATTCACATGCAGCGCGTGCATCCTAGCAATCCAGATTTAACTAACAAATTCCCATGCCCGGATTGTAGTTGTGTATTCAACAAACTGAACAGTCTTAATCGCCACTCAGCCAAAATGCATTCCACTAAACTATCAACAATTCATGAGAATAACGACGAAGATTCTGAATGCAATTTCGATCAAATCATGGCAAAATTACGGACTATTGCCATGCCCGATACCACATCGGATAATTGTTCATTATTCCCCAATGGAAAAGTTAGCAGCCCCGTAATAGGGTCTGTGGGAATGATTGGGGATGATGTATTGACCGCAAGTGATGCTGATTGTGGCTATGTGAAGATTGTCGAAACCCTGAATTCGGCCAAAGAAAAGTCAGAGGTGGTTGTGAAGCAAGTTGAAGGTGAAGACGGGAGGAAGTACTATTGCTGTGATATTTGCTCGAAACGGTTCCAAAGACCTCATGATCTGCTGAAACACAGTCGAGTGCATACTAACGAGAAACCATATGAATGCGGCATTTGTGGCCGTTGCTTTGCCATAAATAGTAACCTTCAAGTCCACTTACGAATTCATGGGAAGGACAGCGAACGGATCACAAATTGCTTCCAATGCCCAAAATGTTTTGTACAATTTAGCTCATTGAGACAGCTTGATATTCACGCCAAaatCCATAAGGACTCGAAACTGTTTCCCTGCAAAATATGTAACAAACATTTCAGTAGTTCAAGCAATTTACGAATACACGAGTACACGCATCGGCCAAAAGATCCAGCTGAATTGGAGgcaagaaaaaatttgaagggTCCGATGTTACTAACTGAATCAATGGGTCTGGAAAGTCCAGCGGAAGAATATCGACGTTTCCAGTGTTCGATTTGTGGGTTGAAATTCAAACGACCAGATCATTTGATGCAGCACGAAGGGAGCCATGCTGGCGCAAAACCACATCAATGTTCTGTTTGCTTGAAGCAATTCACTACCCTCAGTTCTCTACGTAGGCATCAAGAGATTCATACCGGACAGAAAACAAAGCAGTGTGATATGTGTGACGCCAAATTCCATTCTAATACGGAACTCAAAAGACACCAATCTGTTCATAGTTCGGCCCGACCGTATCTGTGCCCATATTGTCAGAAATCGTTCAAAACAAGGGAAAGATGCCGAGTCCACATTAAAACGCATGCGAAAGATTTGAAAGTAAACGAAGAAAATCCAAATTGTGCGGAAGAATCTATGCATGATTATGTTAACCATACGAGCGATGCGAATGGAGCAACCGAGTTGGATACGAATTTCATAGAGACTGATAACAGTGTGTATCTTAATCTTGATGATTCTCTGATTCAAAGTAATGCAGTTGAGGATGTAGTGGAAGATGTCCCTTCATTTACAGCGCATGCAGAACGTGTGAATTCATCGAAATTTATTGATATCAAAGAACTGATCCGTAAAAAGTCTACAAAGGCACTTGCAAACACAATTACTGTTCATTCTATTGAAGAGTTTCCTCCTCCTATCGACCCTCCTCAATCTACTTCAGATAATTCATCAGTCAGAAAGAATCCTTGTGAAAAATGCGGACGATCATTCCAAAAACCTATCGATCTTAGACGGCACCTGAGAACGCATACTCAAGAACGACCGTTTGAATGCAATGTCTGCCACGCATTCTTCAAATTAAAGTGCACATTAGATACTCATAAACGAGTACATGAGGAGAATCGAGCCAAGTTCGATTGCCAAGTTTGTGGGAAATCTTACAGCTCAGCGGATGTCCTGAAAGTCCACATTCGCGTGCATACAAACGAACGACCGTATAAGTGTAAATATTGTGATAAGACATTCCGGACGACTGGCCATAATAAGGTGCATATGCGAACACATCTTAAATCAGCGCAGAATTTGGCGAATGTTCAGAGGAGGGAGGAAGGAAGGTGA
Protein Sequence
MDPGPHTLYSVSDSQTMIIPLDETNLSIFGTPVTDSSSFDRFINDSSAASSVNPAIDGTTARLHSPPSPPGSAPSTKATLKYKKCRKKHIQSSTASANRLPRTYNCDLCTEKFHLPSLRRLHRETAHSLPKPFKCEKCPKRFNSEENCRIHVASHLEAPAACPECGACFQRSTRYRSHLKTHMRNEDLYCEECNQNFENENVFWRHIDMKHSHSTMGVEYDDLTGGIMRKGNVGSSAMGEEIGRFQCNICEKSFTRSSNLTRHLLIHTKTKHYQCTKCSMNFTQKSTLRRHYLIHSGAKEFKCPKCSARFSQRGNLEIHMQRVHPSNPDLTNKFPCPDCSCVFNKLNSLNRHSAKMHSTKLSTIHENNDEDSECNFDQIMAKLRTIAMPDTTSDNCSLFPNGKVSSPVIGSVGMIGDDVLTASDADCGYVKIVETLNSAKEKSEVVVKQVEGEDGRKYYCCDICSKRFQRPHDLLKHSRVHTNEKPYECGICGRCFAINSNLQVHLRIHGKDSERITNCFQCPKCFVQFSSLRQLDIHAKIHKDSKLFPCKICNKHFSSSSNLRIHEYTHRPKDPAELEARKNLKGPMLLTESMGLESPAEEYRRFQCSICGLKFKRPDHLMQHEGSHAGAKPHQCSVCLKQFTTLSSLRRHQEIHTGQKTKQCDMCDAKFHSNTELKRHQSVHSSARPYLCPYCQKSFKTRERCRVHIKTHAKDLKVNEENPNCAEESMHDYVNHTSDANGATELDTNFIETDNSVYLNLDDSLIQSNAVEDVVEDVPSFTAHAERVNSSKFIDIKELIRKKSTKALANTITVHSIEEFPPPIDPPQSTSDNSSVRKNPCEKCGRSFQKPIDLRRHLRTHTQERPFECNVCHAFFKLKCTLDTHKRVHEENRAKFDCQVCGKSYSSADVLKVHIRVHTNERPYKCKYCDKTFRTTGHNKVHMRTHLKSAQNLANVQRREEGR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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