Hill006109.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hermetia illucens
Gene Symbol
-
Assembly
GCA_905115235.1
Location
NC:98250457-98283448[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 6.2e-07 3.4e-05 23.7 3.7 3 23 212 232 211 232 0.99
2 25 9.8e-06 0.00054 19.9 1.1 1 23 238 260 238 260 0.98
3 25 8.8e-06 0.00048 20.0 2.8 1 23 266 288 266 288 0.98
4 25 0.00033 0.018 15.1 2.7 1 23 294 317 294 317 0.94
5 25 0.0027 0.15 12.2 4.6 1 23 325 347 325 347 0.97
6 25 0.0013 0.073 13.2 3.7 2 23 356 377 355 377 0.97
7 25 0.00015 0.0082 16.2 0.3 1 23 413 435 413 435 0.95
8 25 8.2e-07 4.5e-05 23.3 0.4 1 23 674 696 674 696 0.98
9 25 0.00045 0.025 14.7 0.3 1 23 731 753 731 753 0.98
10 25 2e-05 0.0011 18.9 2.7 1 23 759 781 759 781 0.97
11 25 8.5e-07 4.6e-05 23.2 2.2 1 23 787 809 787 809 0.99
12 25 2.1e-06 0.00011 22.0 0.2 1 23 815 837 815 837 0.97
13 25 6e-05 0.0032 17.4 4.1 1 23 843 865 843 865 0.99
14 25 1.9e-06 0.00011 22.1 2.4 1 23 871 893 871 893 0.98
15 25 0.0012 0.064 13.4 0.1 1 23 912 934 912 934 0.97
16 25 0.0002 0.011 15.8 2.2 1 23 940 962 940 962 0.98
17 25 0.00015 0.0082 16.2 2.4 1 23 968 991 968 991 0.95
18 25 0.0005 0.027 14.5 1.2 1 23 1003 1025 1003 1025 0.96
19 25 7.4e-05 0.004 17.1 0.5 1 23 1084 1106 1084 1106 0.98
20 25 8e-06 0.00043 20.2 0.3 1 23 1111 1133 1111 1133 0.98
21 25 4.2e-06 0.00023 21.1 1.8 1 23 1139 1161 1139 1161 0.99
22 25 2.3e-06 0.00013 21.9 1.6 1 23 1167 1189 1167 1190 0.96
23 25 0.0026 0.14 12.3 0.7 1 23 1198 1220 1198 1220 0.97
24 25 0.00028 0.015 15.3 0.7 2 23 1228 1249 1227 1249 0.97
25 25 2.6e-07 1.4e-05 24.9 2.6 1 23 1255 1277 1255 1277 0.98

Sequence Information

Coding Sequence
ATGTTTTTGAAGTTTGCATCCAGTATCTGTCGGGTTTGTTTAGGTCCTGATGCGAAAATCGGATTGTTTGGCGAAGACGGAAATGACCACAAATTTAAAAGTACCACAAATTTACAGATTTTTGAAGATGATGGTCTGCCATCATCGCTTTGCGGAAATTGTTCGGAGCGCTTGAATTCAGCATATGAGTTCCAACAACAGAGTATGGCATCTGATGTACACCTGCGCACATTCGTTCACACTGTGAATACCAAGTTCGCGTCTGAAATAGGAAACTTCCAACAGAATAGTCAGCAAAATAGGGGAGATTCGATGATTTCGGAACATACAATTCACAGTACAAACGATGAAAGGGAATGTGAAGACGACCCAAATAAACAGCGAACGATGTTGGAAATAGAAGTACTGCCCGAAAATCTTGCAGATAACACAAAAATGGGAAATGAGGACGAAAGCGAAGTTATCACCCTTAATTACACATACGTTGAGCCTTTAGTAGAGCAATCCTGTGAAGAGGCAGAAAACAAGGAAGAAATGTACGTTGAAAAGTCTGCGAATTTTTCCGAGGGCAATAACGAAGAGGAAGATTTCCTAGATGAAACAATACGACCACATCCCTCCGATGCTACCCTCTGCCATATATGCAATAAAACTTTCTCTAGTCGGACGAATTTAACTCGTCATATCCTAACACATTCAGATGCTAAACCGTTTCAATGCTCGGTATGTCAGAGCGCATTTACTCAGAAAGGATCGCTAAAGCAGCACATGCTACGACATACAGGGGAAAAACCCCATACATGCACTATGTGTGGGAGGGGATTTAGTCGAAAGAGATTGCTCAGCATGCATCAAAGGATTCATACTGGCGAAAAGCCGTTCCGCTGTGAAGATTGCAATCTGTGTTTCACTGTAAAGGAAGGATTACGGCGTCATAACATACGTAAGCATTCTAGCTATCGAGGGCAAATCTACACGTGTGAAATATGCGATAAAAAACTGCATTCGAAGTACACTTTCCGAAATCATATGTTTTTGCACAATAAGGAAGGCAAAAACAAAATAAGTTGCAAGTATTGCTGCAAATCTTTTGGTACAAAACAATCGCTGCAAACACATTTGCGAATCCATGACGAATCCGCTCATCAGAGAGAGGAGCTTTCTGCGAATAACGAAACAGAAGCAGAACCAGACGTTATCGATTCAGACCAAGAGGGTAGCGAGTCTGAAGACAGTTTCCTTTGTGAAGAATGCAACGAGGTTTTTATAAGCAGGGAGGAATTTCTGAATCACCTAAAAATGCATCAGACACTCGAACAAATGACTGTGTCGGAaattgttttgacatttggttCTGTGAAGTGGCGGACTGATTTGTCTGACTTATATGGGTTGTTTACAGATAAAATTCTAgtgaaaatgaatttaaaagTGGACGTTAATTTGTGCCGAGCTTGCTTGGGCTCGGAATTGATTGCCGTGCTGGATGACCAAAAAGATTTGATACAAAAATTCCAGCACACAACTCAATTGACGATTGAAAGCAATGATCCATTTAATTTATGTAAACGGTGCGTGACACGTCTGAAAGTTGCTTACGACTTTCGCCGTGAATGCTTGGTTTCTGCTTCTTATTTTGAGCATCTGCGAGCATGTATTAACAAAATGAATGCAGAATTGGAAGAAGTAGTGAATTCTGCGGTGACAACAAAGATGGCTTTTGCCAACGATGAAATGAAACTGTTACTCGAAGCTGGATACAAACCTGACGATATTGTTGTTGTATTTGAAGAACCGAATTCTACACAAACTAAGAGCGAACAAGTCACTCAAGAGTCAGCAGGAAATGTAGGTGAAaagcaacaagtttgtgaaattGTTGATACGGTGGGCTTTATTAGTAAAGAAGAAGACGACGATGAGGAACACCATTATGAAGAAGATTTTCATATGGAGGAAGTTGGCTCGATGTCTCCTAAGCCTGAATGTATTGAATACATTGAAACTGTAAAATCATCTTACATGTGTTTAGAATGTAATAAGGAGTTCAGTACAAAGGAAGCTTTAACGAATCATATGGCAACACATGATGAAAATGTTAACCCATTAGAAAATAGTAGTTGCGAAGGGAAGTTACCTGAGAAAGATAATATGGAGGCTCAAATTCTTGCCGAAACTGTTCAGAGTGAATATATGTGTGACGTTTGTGGCAAGGCTTATGAAAATGAAGATTCTCTAGCCTGCCATATGGAAACGCATCAGGACAAAACAGCACACGAATgtgaaatatgtaaaaaaaaattcagttcaAAGGATAAACTGATGCAACACTTGACCATACATTCTCGCAGTCAACCGTATAAGTGCAAGGTTTGCGACAAATATTTTATCCAAAGCTATTCTCTTGTTTATCATATGAGAACCCATACAGGAGAAAGACCATTTGCGTGCGATAAATGTGGAGCCAGCTTTCGTCAAAAAGGTAGTCTAAAGCAACATATATTAATTCATACGGGTGAGCGGCCTTACAAGTGCAGTGTTTGCGATCGAGGATTTACACAGAGCCATTCGCTCACCTTTCATATGAGACGCCACACAGGAGAAAAACCGTTTATATGTGATAAGTGCGGAAACCGTTTTCGTCAAAAGGAAGCACTGAAGCACCATATGCGAGTTCATATGGAAGGCAGAATTACCCGAGCTCGTAAAATTCAACCCAGCAGTGACAAATGTTTTACATGCGAGTTATGTGGCGCAGTTTTTAATCGTTTGGCTATTTTGAAACAACACATGTATATCCATACGGGGGAACGACCTTATACTTGTGATGTATGTGGTAGAGGTTTTACGCAAAGTCACTCTCTTACTTTCCATGCTAGACGACATACAGGCGAGAAACCATTTACATGTGAAAAATGTGGTGCAATGTTTCGTCATTCAATTGGATTGAAGcgacatttattttcaaaacacTCAGATGTAACTACACCAGTTCGTCAAACAGTGTTTTCATGTGAAATTTGTGACGAAAAGTTTTCATCGAAAGAAAAACTAGATGAACATGCGCAGCACCATTTGGATGGAGAACCTGAAATGGAATCAAATCAAGCAGAACAAAATGGAGAAGAAGAAAACGACAAGGAAGAAGCCGAATTTAGCAAGGAATCACTCCAAATTGAATGCCTGGATGAGCAAATGGAAGACGTAAACCCGTTAGCTGAAGTAGAGGCAAAACCAGAAATTCATCTATATTCCTGTACACAATGTGATGCTGGATTCGATACACAAGGAATGTTCACAAAACATATGCAAGAACACGATGTAAAACCATATACTTGTGATGTATGTGGAAATGGCTTTACACAGAATGGTTCTTTGAAGCAGCATATGTTTATTCACACGGGGGAACGTCCGTACAAATGTGATATTTGCGGAAGAGGGTTCACCCAAAGCAAATCTCTCACATTTCACATGAGGCGACATACAGGCGAGAAACCATTTCAGTGTGAGCAATGTGATTTGAGTTTTCGTGTAAGGGATGCGTTGAAGCGCCATATCCAAATGCATCATTCTGGTCAGTCTGCTAAAGTGCACATTTGCTCAATATGTCAAAGTGTCCTAAAATCGAAACCTTCTTTGGTTGCTCACATGAAGAAACATCTAGAACAAAATTCAGAAATAAAATGCGGTGTATGTGAAAAGGTTTTCTCGAATCGATGCTCACTGGATGAGCATGCCAGAGTGCATACAGGAGAAAAACCATTTCGATGCGATGAATGCGGTAAGGAGTTCACGCGGCGCTCATCATATCGACGACACCAAAAATGGCATCAGGAGAAAAAGTAA
Protein Sequence
MFLKFASSICRVCLGPDAKIGLFGEDGNDHKFKSTTNLQIFEDDGLPSSLCGNCSERLNSAYEFQQQSMASDVHLRTFVHTVNTKFASEIGNFQQNSQQNRGDSMISEHTIHSTNDERECEDDPNKQRTMLEIEVLPENLADNTKMGNEDESEVITLNYTYVEPLVEQSCEEAENKEEMYVEKSANFSEGNNEEEDFLDETIRPHPSDATLCHICNKTFSSRTNLTRHILTHSDAKPFQCSVCQSAFTQKGSLKQHMLRHTGEKPHTCTMCGRGFSRKRLLSMHQRIHTGEKPFRCEDCNLCFTVKEGLRRHNIRKHSSYRGQIYTCEICDKKLHSKYTFRNHMFLHNKEGKNKISCKYCCKSFGTKQSLQTHLRIHDESAHQREELSANNETEAEPDVIDSDQEGSESEDSFLCEECNEVFISREEFLNHLKMHQTLEQMTVSEIVLTFGSVKWRTDLSDLYGLFTDKILVKMNLKVDVNLCRACLGSELIAVLDDQKDLIQKFQHTTQLTIESNDPFNLCKRCVTRLKVAYDFRRECLVSASYFEHLRACINKMNAELEEVVNSAVTTKMAFANDEMKLLLEAGYKPDDIVVVFEEPNSTQTKSEQVTQESAGNVGEKQQVCEIVDTVGFISKEEDDDEEHHYEEDFHMEEVGSMSPKPECIEYIETVKSSYMCLECNKEFSTKEALTNHMATHDENVNPLENSSCEGKLPEKDNMEAQILAETVQSEYMCDVCGKAYENEDSLACHMETHQDKTAHECEICKKKFSSKDKLMQHLTIHSRSQPYKCKVCDKYFIQSYSLVYHMRTHTGERPFACDKCGASFRQKGSLKQHILIHTGERPYKCSVCDRGFTQSHSLTFHMRRHTGEKPFICDKCGNRFRQKEALKHHMRVHMEGRITRARKIQPSSDKCFTCELCGAVFNRLAILKQHMYIHTGERPYTCDVCGRGFTQSHSLTFHARRHTGEKPFTCEKCGAMFRHSIGLKRHLFSKHSDVTTPVRQTVFSCEICDEKFSSKEKLDEHAQHHLDGEPEMESNQAEQNGEEENDKEEAEFSKESLQIECLDEQMEDVNPLAEVEAKPEIHLYSCTQCDAGFDTQGMFTKHMQEHDVKPYTCDVCGNGFTQNGSLKQHMFIHTGERPYKCDICGRGFTQSKSLTFHMRRHTGEKPFQCEQCDLSFRVRDALKRHIQMHHSGQSAKVHICSICQSVLKSKPSLVAHMKKHLEQNSEIKCGVCEKVFSNRCSLDEHARVHTGEKPFRCDECGKEFTRRSSYRRHQKWHQEKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00793940;
90% Identity
iTF_00793940;
80% Identity
iTF_00793940;