Basic Information

Gene Symbol
lov
Assembly
GCA_905115235.1
Location
NC:168172634-168299045[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-18 2.6e-15 55.4 0.0 1 44 568 611 568 612 0.96

Sequence Information

Coding Sequence
ATGCAAATAGATTTGAACGACGACTGCGGTCCTAAAGAATCTGCAATGGCATCGCAGGACCACTACAGTTTACGATGGAATAACCATCAAAATCACATACTGAGAGCCTTTGATGCGCTCCTTCAAACTAAAACGTTGGTGGATGTGACCCTAGTGTGCGCGGAAACAAGCATACGTGCCCACAAGATGGTACTGTCCGCTTGCTCGCCATTTTTCCAGCGCGTCTTCTCCGAAACGCCATGCAAACATCCAGTAATTGTACTCAAAGACTTCCGAGGTTGGGTAGTCCAAGCAATCGTTGATTTCATGTACCGTGGTGAAATCAGTGTACCACAAGAGCGCCTGCAGACCCTTATCCAGGCGGGAGAATCACTTCAAGTTCGCGGGCTTGTTGAAAACACTGTACCTGGTAACACCCCAACTCCAGCAGCATCACCCGACGAATTCAGTCTGATGGACACATCGATGTTACAATCCGAGCTGGGCGAACGATGCTCCAACTACGACGATGATCCTGCGCCTACAATGATCGGCTCAAATTCAAAACTGATACTACCCTCACAGATTTTTGGAGACAATGCTCAGAGTTCCCACCTATCGAATCCAGACCTATGTACTTCGCCGATGCCGCGAAGGAAACAAGCACGGCCGAGGAGACGTTCGGGGGAATGTGGACCACATGATTTAAGTAAACCCGCCTCACCAAGTCCTGACACAAGTGACACTGTCAAGGTTGAATCAACTAAGGACGATAAACCAAAAACTGAAGAATCAAATCCCAATTTGTCAAATACAGATGACGAAGAAAATACAACTAACCAACAAAATGAACGGGTGCAACCCGAAAACTGTGATGGACCTGAGGATTTGTGTACAAAGAAAGACAGTGATACCAGTTCGTCTGAACGAAGCAAACTCCAAACACAAGAGCAGCAAAGTCAGCAACAAACAATGGAGATCGATGAGTCAAATCCTTCAAATAGTAACACTAGCATAAGtcacaacaataacaacaacaacaatagcagtagcaacaacaataataacaacCGAATAATTCTCTCACTCAAAGAATTTCGACACCTCAACAAACCACCCTCCATCGCTCGATCGCCAAATCCATTTCATCCCTCCCATCCACTTCACCTGCGCCCAACAGATTCGCACAGTATGAAAAGTGAATCATTAGAAGGTCAAATGGACAACGAGAGTCCTTTCCACATGGAACAAATGGATCTTTCGATGGCAGCTGCAGCAGCTGCTGCTGCACAACATCAACATCAGATGGTGGCCAGCGGAATGTTGGGAATGCATTCATCAAATGTACACCAGCAACAAGGTCATGACAGGCTCGATGCAGACATGGTTAATCATCGAATGAATAAGGAGTTTACCCCTAGCTCACCGATGAATCTTCCATCACATTTTAATCCACCTGACGGACCACCACATCCACCATCGCCGCTACCTTTTCCCGGGATGTCATCAGCGCTAGGCTTAACACCGCCACACAtgTTCGGACTAGATTCACCGCTTGGACTGTTCCCGCCTGGTATGGATCCTGGAAAGCTATACAACCCTCTCATGGAAATGTCGGATCCGCGAGGTTTGCCCGGCGATCACCCACCATTCCtcaaaaagaaaaTGTCTCGCCCGAAAGGACAGCATTCTGCTCCTCGCGGTGGACCTCCCCGTTCATGGACGAATGCCGAACTGACAGAAGCCCTGCAACACGTATGGAATAAGAAAATGACGACAAGCCAAGCATCCCGCATATTCGGTATACCTTACAATTCGTTGCTAATGTATGTTCGGGGGAAATATGGAAAGAGCCTAAAATTGGAGCAGCTTCGAAAAGACTGTATAAGTGGGCCACCGATAGAATTGCTTACGATGAGTATggccggcaataataataataacaataaaaatatgaaCGAGAATCGAACCAAAGACTCGAAAGACCTAGAAGGACCAATGCAACGTAGTTCAAGCTCTGAGCCCGATCTCATGTCGAGTCCAAATCCAATCTTTAATCCATTCCCGCCCGGTTTTTATCCTGATTTCCCTGGTGGATTTCCAGGATTACCACTTGGTATGCTCAATCTACTGCCACCTGAACGACATCAGAATGCCATGCACATGAATGTCGTAGATGAAGATTGTAAATCGGATAGATCAAAACAATCCTTAGAGGATGACTTTCCCCAGCCCCTTGCCCTCAATCGTGAAGATCGTCGCGAAATGCTTCAGCAGAATGGGCAGGATTGA
Protein Sequence
MQIDLNDDCGPKESAMASQDHYSLRWNNHQNHILRAFDALLQTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFSETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQERLQTLIQAGESLQVRGLVENTVPGNTPTPAASPDEFSLMDTSMLQSELGERCSNYDDDPAPTMIGSNSKLILPSQIFGDNAQSSHLSNPDLCTSPMPRRKQARPRRRSGECGPHDLSKPASPSPDTSDTVKVESTKDDKPKTEESNPNLSNTDDEENTTNQQNERVQPENCDGPEDLCTKKDSDTSSSERSKLQTQEQQSQQQTMEIDESNPSNSNTSISHNNNNNNNSSSNNNNNNRIILSLKEFRHLNKPPSIARSPNPFHPSHPLHLRPTDSHSMKSESLEGQMDNESPFHMEQMDLSMAAAAAAAAQHQHQMVASGMLGMHSSNVHQQQGHDRLDADMVNHRMNKEFTPSSPMNLPSHFNPPDGPPHPPSPLPFPGMSSALGLTPPHMFGLDSPLGLFPPGMDPGKLYNPLMEMSDPRGLPGDHPPFLKKKMSRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIELLTMSMAGNNNNNNKNMNENRTKDSKDLEGPMQRSSSSEPDLMSSPNPIFNPFPPGFYPDFPGGFPGLPLGMLNLLPPERHQNAMHMNVVDEDCKSDRSKQSLEDDFPQPLALNREDRREMLQQNGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00793626;
90% Identity
iTF_00793626;
80% Identity
iTF_00793626;