Hill008873.1
Basic Information
- Insect
- Hermetia illucens
- Gene Symbol
- ttk
- Assembly
- GCA_905115235.1
- Location
- NC:14575018-14623088[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.7e-18 3.8e-15 54.9 0.0 2 45 482 526 481 526 0.95 2 4 3.7e-13 8.3e-10 37.8 0.1 3 44 1191 1232 1189 1233 0.90 3 4 0.12 2.7e+02 1.0 0.0 28 37 1262 1271 1240 1277 0.86 4 4 2e-16 4.5e-13 48.3 0.0 3 40 1297 1333 1295 1336 0.94
Sequence Information
- Coding Sequence
- ATGTCCGTGCAGCAGTTCTGTTTGCGGTGGAACAACCATCAGCCCAACTTCATCTCGGTGTGCTCGTCGCTTCTGCACAATGGCACGCTAGTTGACGTCACACTGGCCGCCGAGGGAAGGCAGCTCCAGGCGCATAAGATTGTTTTGTCGGCGTGCAGCTCCTACTTTCAGACTCTATTCACGTCGAACCCGTGCCAGCATCCAATCGTTATCTTAAAAGATGTTCAGTATAACGACCTTAAAACTATGGTAGATTTTATGTATTACGGGGAAGTGAATGTCTCACAAGAGCAACTTCCCCATATATTAAAAACTGCAgaaatgttgaaaataaaaggTTTGGCTGAAATGCCAGATGCCGCGGCATCTCTAACAAAATCAGAAAGCAAATCGTCATCGGAGCAAACAGATCAGTTACAGGGTGGAAGTGGTGAATCGTTGTGGGGAAGTACAGATTCacaatttcaacatcatcatcatcagcaccaCCCGCAACACCATTTACAACCACATCACCAACAAAGAAGATCGCCATCACCTACATCGTCAGGCGCTTCACCAGCAACGAGACGAAAACGACTTAGAAAATCATCAAATAGTGGTTCAACTGAACGAACATCTGAAGAGCAAAGTAGTGTTGAAGGTTCAGCAAATATTAATTTATCTCAGATGGCACAAATGTCATTTGGGGCCACTGGTACAAATTTAACGCAAACTCTACACACGAAAATTATTAAAGAGAGTTCAAGTACGGACACCGACACCCATCCTCAAGATTCTTCGCAGGAAAGCATCGACGATACAGCCAGTCATCAACACCACGTGCAGCAAATTaAACCTGAAGCGGATCTAAGTAACGTACAGCAATCCATACCATTAGATATATCCGGTCCAACAACACCATCAGAGCAAGAAGGCCCAAATGTAACATGTTCGCAGTCTCAGTCATCGCATTCGGGTGTGCAATGGACGGTTGTGGACCCGAACTATCCACGATTTTCGCTATCATCATGTCAAGCAAATATCTCGATTGGCGGTGATCAGTCGTCTGAGAATGGAGCAAGTGCCGCGAACGGGCAACAccatcaacaacaacagcaacagcagcCCCAAACCATCAATACTTCGTCGGGAAATAGTGTAGTTACAACGAATCAACAGGGGCACATTCAAATGCATTATCAAGGATCGGCATATAATCCGCAAATGATATCAGTGAATAGTCTCGTTAGCAATTATTCTCAGAATTTATCAACGCCCACATCACCGACTGATTCGACAATGGTTCAATCTGTATACAGTCAAGGACCAACCCCCACCCAATCGCCTGTGCATCAAATGGCAACAGGAAATAGTACAACATCTAATGCAAACTCGCAAAATCAGCCGTCACAATCGACGCCGGCACCACAGAAAAGGAAACGTTCTGTGAACCCCCAAAGTGATGAGAACTTCATTCgagctttagaagcagtaagaACGGGCGGCATTGGATTTTGCAAAGCAGCTCGATTATATGGGGTGAATAATCGAACGTTATGGTTAGAATATAAAAAACGGGGATATCCAATAAGTAGGCCTAGTATTAAAAATCGAATTAAACTAGAGCCAAATATATCTCCTCCTCCCTCAACAACTCCGACGAATGAAGAGAGCACTATAGAAAATTACGAACATATAAATCAACCAGCAATAAAcatgcaagttcctccaacttcgGAAACCCCTACACCAATCATGTGTCCACCGCATGCGCATCCAATGGGAGTGATGAGTTTTCTTGATACCCGACACATGGAATTTCCAACCAGCATTCACACAATGTCTCGACAGCGATATACAGATAGTGCCGTTAATGTGAATACAGCTGCCATGAATTTGCAGGGTCTTAATTTTAACTCTATGGATCCAGGTGGTGAAGataaaATGGATTTAACATCGGTTGGAAGCAAACGTAATCGTTTCCTGATTCGTCAACCAAGAGTTAAACGTGACAGCGATACAAGTCAACAATCGCCAGATATCATTGAACTGGAACATCCTTCTTCTAGAAATCTGTTATCAGTTCCGCCAAAAATCGAAAGGCATTCATCTGAGCCGGCTCCAAGCATTGCTCCTTCTTCACCTCAACTTCTTTCTGTCCCCGGTCAGTCCATACCATTGTTGGTGAAGCAACATTCTCATCCGCTGCTTCCAAGCAGCCATTCGCCTCCGTTATCCTTGAATTCAAGCGGCAATTTTAGCTTACATCGTCAGCTTTCCCAACCAACGCCATCATTGATTTCAACAGGAGATACAATTTTCACAACATCCGCATGTATCTTATCTACAAACACAATAAGTCAGAGTCATGGaatggtacaatttatcccttCAATGTCGATTAAACATGAAAGTATGGAAAGCTCACCCTCGAAAATATCCACTGGTCCGAATACACCCATTGTCCTGTTAACCGATACAATATCGGGAACAAGCAGTACAGAGCAGCACTTAAATCCAATTCGGGTAAAAGCAGATGAGTTGCAGCGCTCGGCGTCATCACCGCAGACGGCTCGAGAACCCTCTTTAGAGAACCCACGATCAAGCCATTGCCCAGTCATAAGACCTGGCCCAGCGCTAGGCTGTAACTTCTGTTGGAACACTATTGATGCACATGGAAGGATCTTACGCCGTAAAACCAAATACCACTGCCCTGAATGTCAAACAAATCTGTGTATCGTACCATGCTTTCAAGAGTATCACGAACGGCAAGGAAAAACAAAACGACCCGTTTTGGAATCTCGGTACAAATCGTTAGGAAAATTACAGAAAGAAATGCATCACCTCAAGTGGATGACCCATGCTGATACCATCATGGAATTACAGCGAAGCCTTCACAATGACGAGGCCTCGGCAGATGTGTGGCTTTCATCTGACAAAGGCATCGTTTTTCGAGCTCATCGCTTCCTGTTGTGTTTCTGTAGTGACTATTTCAAAGAAATGTTCCGGGACGTTCCTACCAACCAGGAAGTGACGATTATAATTCCGGAAGTGCGCCCGAGCATTTTGAAGACAATCCTAGATTTTATTTACACTGGCGAAGTATGCGTTTCGTCCGAGGATATGAGCGATTTCTTCAATGCTTTCAACTTGCTGGAAATCAAGAGTGGAATAAATTGCGAACGGCGGGTAACCCAGAAACAGGAGCAGACACAGTATCGGGAAGAGTTAACAATCGAACCTGTGGAAGATATAGAAATAGAAGTTCAGCAACAATCTGGAAGTGTCGACAAATCAGAGGAAAACGATGGAATGCATTCAGAAAAGGATCTAGAATATTTGGAAGTGTACAGTTCACATGAAAAATTTGCTCAGTATACAATCGAACAGCCCAGCAGTGATTACATTTTAACAGAAGGTGCAGAGTCGAGTTTTGTACTTCCGGTCGAGAAAACAGAGAACGAGATCACAATCAATGCCGACGAAGTGCATGCAGTTGAAAATGCTGATCTAGAaccgaaattcaaaatacaGAAAACTCCAAAAATCTTCAAACCAGATGAAATTCAAGGGATAGGATCACGTGGTGAAGCTTTCGAAGCGGCAGTTCAAGAAGTTTTACAGTTGGGTGTTAGTTTACAAAAAGCCGCAACGAAGTACAATATATCTAAAACGGTCCTATGGCGGCGAGTTCGGAAAAATAGTGCCTATAAAACTGAGCGTGAGCACCCAATGTTAAATGCTGCAATATCAATGCTCGAAAGTGGCGAGTCCTTGAAAACAATCAGTCAAGCAATAAAGATACCAATATCGACGTTACATCGACACAAAGTGCGGTTGTTACAAGAAGGTAGATTGCCACAACATATTCAGGTTAGACGGCGCGATTCAAAGGACAATCTGAAAGAACGAATTTCAAACGCTATAAATGCTTGTGCCCGCGGAATGTCTCAAAACCAAGCAGCCAACGTTTATTCTGTTCCGAAATCAACTTTGTGGCGACACTTACAAAGGCAAAGTACCTGCAATGTCAAAATCGACAGTCAATTAAGCGATGAAATTTCTATACCGAGCTAA
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVCSSLLHNGTLVDVTLAAEGRQLQAHKIVLSACSSYFQTLFTSNPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPDAAASLTKSESKSSSEQTDQLQGGSGESLWGSTDSQFQHHHHQHHPQHHLQPHHQQRRSPSPTSSGASPATRRKRLRKSSNSGSTERTSEEQSSVEGSANINLSQMAQMSFGATGTNLTQTLHTKIIKESSSTDTDTHPQDSSQESIDDTASHQHHVQQIKPEADLSNVQQSIPLDISGPTTPSEQEGPNVTCSQSQSSHSGVQWTVVDPNYPRFSLSSCQANISIGGDQSSENGASAANGQHHQQQQQQQPQTINTSSGNSVVTTNQQGHIQMHYQGSAYNPQMISVNSLVSNYSQNLSTPTSPTDSTMVQSVYSQGPTPTQSPVHQMATGNSTTSNANSQNQPSQSTPAPQKRKRSVNPQSDENFIRALEAVRTGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKNRIKLEPNISPPPSTTPTNEESTIENYEHINQPAINMQVPPTSETPTPIMCPPHAHPMGVMSFLDTRHMEFPTSIHTMSRQRYTDSAVNVNTAAMNLQGLNFNSMDPGGEDKMDLTSVGSKRNRFLIRQPRVKRDSDTSQQSPDIIELEHPSSRNLLSVPPKIERHSSEPAPSIAPSSPQLLSVPGQSIPLLVKQHSHPLLPSSHSPPLSLNSSGNFSLHRQLSQPTPSLISTGDTIFTTSACILSTNTISQSHGMVQFIPSMSIKHESMESSPSKISTGPNTPIVLLTDTISGTSSTEQHLNPIRVKADELQRSASSPQTAREPSLENPRSSHCPVIRPGPALGCNFCWNTIDAHGRILRRKTKYHCPECQTNLCIVPCFQEYHERQGKTKRPVLESRYKSLGKLQKEMHHLKWMTHADTIMELQRSLHNDEASADVWLSSDKGIVFRAHRFLLCFCSDYFKEMFRDVPTNQEVTIIIPEVRPSILKTILDFIYTGEVCVSSEDMSDFFNAFNLLEIKSGINCERRVTQKQEQTQYREELTIEPVEDIEIEVQQQSGSVDKSEENDGMHSEKDLEYLEVYSSHEKFAQYTIEQPSSDYILTEGAESSFVLPVEKTENEITINADEVHAVENADLEPKFKIQKTPKIFKPDEIQGIGSRGEAFEAAVQEVLQLGVSLQKAATKYNISKTVLWRRVRKNSAYKTEREHPMLNAAISMLESGESLKTISQAIKIPISTLHRHKVRLLQEGRLPQHIQVRRRDSKDNLKERISNAINACARGMSQNQAANVYSVPKSTLWRHLQRQSTCNVKIDSQLSDEISIPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00793589;
- 90% Identity
- iTF_00793589;
- 80% Identity
- iTF_00793589;