Basic Information

Gene Symbol
ct
Assembly
GCA_905115235.1
Location
NC:31199305-31441993[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5e-27 3.4e-23 81.1 0.0 3 71 844 913 842 919 0.94
2 3 5.5e-32 3.7e-28 97.0 0.0 3 77 1298 1373 1296 1375 0.96
3 3 9.4e-31 6.3e-27 93.0 0.0 3 76 1499 1573 1497 1576 0.96

Sequence Information

Coding Sequence
ATGCCCTCCAATCTAAGACAATTCGTCCGAATGCAGCCAACCATACCGCAAACACAAACGACTGTAACAGCCGATATGGATTTGCCGGCTGTACAATCAATGGATTGGCTATTTAAAAAGGAAAGAATATATCTATTGGCACAATTTTGGCAACAGcGAGCAACACTAGCAGAAAAAGAAGTCAACACCCTAAAAGAACAATTATACGGTTCAACACCAACCACATCAGTTTCACCACTCTCACCAACGACATCATCATCGGCATCATCAAACAattcaacaacatcaacaataCCCGTCAACACAACAGTAACCGCATCAGCCATACTAGCCGCGGTTTCACCAACATCAGCTGTATCTGgtgcaacagcaacaacaatacCAAATAAGCATACACTCAACAATAACAACATCAACAGTAATAGCAATTCAAGTACGAAACTCAACAGTTTCACCATTACCCAACAAAACGGTCTACCATCGCCGGCATCAACACCACCAGCATCGAGTTGCGGTAGCGCCGCGGTTACACCAACGGGTACACCAACGACAGCGGCAGCTAGCAAGGAAGAAATTGCCAGTCTAGCAGCCAATTGTATTGGCAGTCTCACCAATAAACTGCTCAATTTCACCAATAGTGGGAAGATGGATGACGGCAACAGTATGACGTCGTTAACCTCAATGACGGCCGACATAAAGTTGGAAGAACAATTGCATAAGGATAACAATAATAGCAGCAGTTGTAGTAACAATAATAACAGTAATAGCAACAATACCAATAATAGTAATAGTAGTgcgaataataatttaatacgatcgagtacaccaatcgaTAAAAATCTAAGTACGGATTGTCCGAGTAATTTAAGTAACGTGAATAATAGTGGTAATAATAATAGCAGTAGTAGTAATAGTGGTAATAACAATGCTAGTGGTAATAATAGTTCGAGTAGTAGCGgtaaatcatcattatcatcatcaacatcaaattcATCAACAACAGCCACAACTTCAATTGCCACATCATTATCGTTAGCTGCGCCGACAACAACCACAGGATTAGTTACAGATGAATTAGCTGCCAAAGATAAAGAGATCAAAGCATTAATCGATGAAGTAACACGATTAACCGCCCTCCAAGAGACACACGTCGTACAAATCCAAAGACTTGAGGAACGCTTAGAACTCAACCGTCAACACATTACAAGGTTAGAGGCACAACTACAACAAAGTCAAAGGGAACAGTCAGGACTGACATCAGGAGGTAGTGCGTCATCAGTGCAGCCGCTGAATCTAGTTGATGAAAGCATCgtgaaaaaggaaaatagCAGTATAATCCCATCATTGGATATCTCAAGTCCAGCTGTTGCAGCAGCTGCAGCGGCTGCCGCTTCAGTGGCGCAAGATGCTAAACAATTCCAAGAATTATTGCTGGAGCGGACCAAAGCCTTAGCAGCGGCCCAAAGTGAGGCTCTTAAATCAAGTGCGTGTTCAGAAGGATCGGAATCATCAAAATCTGATCAGAAAAAAGGAGATGAACAAGCACCCAAGGCATCAACCCCATTGCCAAATCGTCCAGTCGCAATTTCTCCGACAATAACTAGCAACACAAGCAACATCGGCACCACTCCTCATGAGAAGCCAGCCAAGGCTATTAAAACGCCCAGTCGTTCGGCAACAAGCACCCCATTCGCTGGAACACCAATGCTTTCTGGTTTTCCCAGTATCGGTGACACCAACTACGATAATCAAAACTCACCGCGCTCAACAAAAAGCAGCACCAGCGCCAATTTGCCAAATGTTGATCAGTTCAGCTCTTTTCTGGGTGAAGAAATTGTGAACAGTTGGCGACGAGGATTTGACTTCCCGCCATTACCACTACCACCTTTATCCTGCGCAGCTAGTCAACATTTGCTTCCACCAATTGCAGCAACAGCGGCTGCAGTTGCAGCTGCAATTGTTCCGCCATCATCAACAACTACGGCGGCAGCAACTTCAACGCCAATTCCACAATTTTCTACAGCACCTCCGCCATCCACATCTTCCACAACCGCTCTCCTAAGCCAACTAGCTAATTCAACCTTCTCGAATTCTCTTCAAACAGATGCAAATAGTAGCGGTGGTGGTTTAAACAACTGCCATCAGGACATCGATAAAGCGAGTAGTCATCATGAAACTTCATCTACAGCAAGCACACCGAATCTCCAGGACACAAGGTCTACCGACGAGCACATGAACGGAAGCTGTGGTCCAGGAGGACTAGGATCGATGTCCATGCAACAGATGATGAAAAATCAGGCAGAGGATAATAACAACAGTCTTGGCCCACTTCCTCATGTACCCGCCGGGTTCCTTCCAGGTCTACCGTTCCAATTTCAGGAGCGCGGTCACTTCCGTTTCGCAGAAGATCTCCAATTACCACCCGGATCAATGGCTGGTCGTTTGGGTGATTCGTTGATACCGAAAAGTGATCCAATGGAGGCAAAACTTCAGGAGATGCTACGCTATAACATGGATAAATACGCTAATCAAAACCTCGATACCTTACACATATCACGACGAATCCGCGAACTATTATCCGTGCATAATATCGGACAAAGGATATTCGCCAAATACATCCTTGGACTTTCACAAGGAACCGTCTCGGAGTTGCTGTCCAAACCCAAGCCATGGGATAAATTGACGGAAAAAGGACGTGACAGCTATCGAAAAATGCATGCCTGGGGATGTGATGATAACGCCGTGTTGCTCCTGAAATCATTGATACCGAAAAAAGaCTCTGGCATGCCACAATACGGTCGCCCCGATGAAGGAATGTCTGATGATCGGATCGCCCACATCCTCTCAGAAGCATCGAATCTCATGAAAACCCCGCAAGGACACAGTCAAGCCTCACACCTTCAGCAACAACAAGTTCAGCAGGctcaacagcagcaacaacaacaagccGCTGCAGCTGCTCAACACTTCCAACAAGCAGCCGCTGCGGCAGCTGCTGCAGCAGCagtccaacaacaacagcatgCCCAACAGCAAAGTCAGCAACAACCTCTCCATCAAAACTCAGTGGGTCAAGAGGATTCACACAGTAACGAGGACTCCAAGTCACCACCAAATCAAAGCACTTCACCATTCTTCAAGGATTCAATGCAACGACGAATGAAGAAGTATGACAACGACGATATATCGCAAGACAAGGTTGCAAGAATATATCAAGAAGAACTCGCGAAACTTATGACTCGCGGCCCACGAGATGCTTTCCAAAGTTTTCTCTTTCCACACTTTTTCAGTGGTGGCATGCCACCGGCTGCAGCCAATGCCAATCAACCACAAATGCCTGATGAGAATATTCGAATGGCACTCGAAGCATATCATCGTGAACTAGCTAAACTACAACAAACTGGCGGAGCActtccaaattttccaaatctaCCAGGTTTGCTAGCTCTCCAGCAACAAGCTCTGAATGGGGCACAAGATCTCACCTGTAAAAAGGACAAGTCCATGAAAGTCAATGGCCAACAAAACTCTTTCTCAATGGAAACAGCAGATCAAAACACCAAAGACTCAACCAGCGCTAGTGACGAAGCATTGAGGCATTCCAGTGCATTCAGTTTAGTTCGGCCGAAACAGGAGCCTGGCACACCAGCACCGACAACAACTGCAGCAACGACACCCTCGACGGCACCCAGCCCGCTTAGCAATTCCATCCTGCCACCTGCAATGACACCGAGCGATGACTTCTCTTCTTCAGCAAGCCCACTACAGAGAATGGCATCTATCACGAATTCACTTATCACACAACCACCGGTCACTCCCCACCATAACACACCTCAAAGACCAATGAAAGCAGTTCTTCCGCCAATAACACAGCAACAGTTCGATATGTTCAACAATCTAAATACCGAGGACATCGTCCGCCGAGTCAAAGAAGCCCTCTCACAGTACTCAATTAGCCAGCGACTGTTTGGCGAATCAGTGCTAGGTCTTTCGCAAGGATCGGTCTCAGACCTACTAGCACGCCCAAAGCCATGGCACATGCTAACCCAAAAAGGACGAGAACCTTTCATTCGCATGAAAATGTTCTTGGAAGATGAAAATGCAGTTCATAAACTTGTTGCCAGCCAATACAAAATTGCTCCTGAGAAACTCATGCGCACAGGAAACTACAGTGGAAGCCCGCAAATTCCAGCTGGGATCAATCCAAAAATGGTCCCGATGCAGAAAATGATGAATGAGATGAAAATGCAAGACGCACCTCAACACCTAATGCAATTGCAAGCTTCCGCAAtggcccatattccaacatctCAGCACCAAGGAATGCTTCTGACACCACCAGGACTTCCACCGCACCACGCTATCAGCCTTCCTTCCCATAATGATAAGAAGCAGATGATGATGCCATCAGTTCATTCACCGCAACAAAACAATGCCATGCGTGGAATGCATCAACACATGTCACCTACAGTCTATGAAATGGCTGCACTTACACATGATCTCGATACCCAAGTGATAACTACGAAAATCAAAGAGGCCCTACTGGCCAACAATATCGGACAGAAAATCTTTGGTGAGGCAGTGTTAGGTCTCTCTCAAGGATCTGTCTCTGAACTTCTATCGAAACCAAAACCGTGGCATATGCTCAGTATTAAAGGACGGGAACCTTTCATACGGATGCAGTTGTGGTTATCCGATGCCAATAACGTAGAGCGACTTCAGGCTCTCAAAATTGAGAGGCGTGAAGCCAGCAAGAGGAGACGATCGACAGGACCGGGAACCCAGGATAACAGTTCAGATACTAGCAGTAATGATACAGCTGACTTCTACACCGGCAGTCCTGGTCCAGGTTCAGTAGGATCAGGCGCTGGGGTTCCGCCAAACAAGAAGCAGCGAGTGCTGTTTTCAGAGGAGCAAAAGGAAGCTCTTCGATTAGCCTTTGCATTAGATCCTTATCCGAATGTAGCGACTATTGAATTTTTAGCAAGCGAACTGGGTCTTGCAACTAGAACGATAACGAATTGGTTCCACAATCATAGGATGCGACTGAAACAACAGGTTCCTCATGGAACTCCAAGTGAGCCTGTCCCAAGTCGTGAGAATCAGTCAGCGACTCCATTCGACCCTGTTCAATTTAGGATTTTGTTGAATCAGCGGCTTATGGAACTGCAAAAAGAACGAATGGGCCTTAGCGGAGTTCCGATTCCCTATCCACCGTATTTCACCACTAACCCCAATCTTGCCGCCTTGATTGGACGAGGTTTGTTGCCAGGTAACGAACCAAGTCTAGCCGCATTGAATAATGCCTTCAAAGAGCAGATGAGTGGCCTCGATCTCACAATGAATGCCTTGAAGCGGGAAAGAAACGATGATTTTGAAGACGACGGGGAGGAAGAAAGTCATTTATCTGATGCAGAATCGTTGGACGGATCCGATGTAAAGTCTGAAAACCTTAAAGAAACCCCTTCGTCATCATCACGCCTATCAGGGGGATCAATGGTTCAGTCAAGAACGTCAAGACGAAAACCCGCCGCCCCACAATGGGTTAATCCCGACTGGCAAGACGGAGCCGGTGGTCCACCTCCACCGGGACCGATCACCGAACCTGAGGTGATTATTAATGGAGTTTGTGTTATGCAGAATCAAGCTGCCGACTATAGTCGTAAAGCTGGCAGCGAAGAAACCGTCCGTGTTGAGCCTACCGATGTTCAGGACCATCATCGCTCTTTCGACGATGACGCCGAGGAGGATTGTGCATCTGATgcagatgatgatgaaggtcgACGATCCCAAATGTCCAACAAGCACTCGGAGCCTGAAATTGTTAATGAAAACGACGAAAATGATTTGGCTGATGAGAAAAACGAAGACTGTGAGAGTGTAGTGGAGGATGACACCCCAAGTGGGGGACGATCGGGTGGAAATAAGAATGGTGATAGCAAGGCGGAAGagatcgatgatgatgatgaggaggaAGGTGACAGTGGCTGGCATTATTGA
Protein Sequence
MPSNLRQFVRMQPTIPQTQTTVTADMDLPAVQSMDWLFKKERIYLLAQFWQQRATLAEKEVNTLKEQLYGSTPTTSVSPLSPTTSSSASSNNSTTSTIPVNTTVTASAILAAVSPTSAVSGATATTIPNKHTLNNNNINSNSNSSTKLNSFTITQQNGLPSPASTPPASSCGSAAVTPTGTPTTAAASKEEIASLAANCIGSLTNKLLNFTNSGKMDDGNSMTSLTSMTADIKLEEQLHKDNNNSSSCSNNNNSNSNNTNNSNSSANNNLIRSSTPIDKNLSTDCPSNLSNVNNSGNNNSSSSNSGNNNASGNNSSSSSGKSSLSSSTSNSSTTATTSIATSLSLAAPTTTTGLVTDELAAKDKEIKALIDEVTRLTALQETHVVQIQRLEERLELNRQHITRLEAQLQQSQREQSGLTSGGSASSVQPLNLVDESIVKKENSSIIPSLDISSPAVAAAAAAAASVAQDAKQFQELLLERTKALAAAQSEALKSSACSEGSESSKSDQKKGDEQAPKASTPLPNRPVAISPTITSNTSNIGTTPHEKPAKAIKTPSRSATSTPFAGTPMLSGFPSIGDTNYDNQNSPRSTKSSTSANLPNVDQFSSFLGEEIVNSWRRGFDFPPLPLPPLSCAASQHLLPPIAATAAAVAAAIVPPSSTTTAAATSTPIPQFSTAPPPSTSSTTALLSQLANSTFSNSLQTDANSSGGGLNNCHQDIDKASSHHETSSTASTPNLQDTRSTDEHMNGSCGPGGLGSMSMQQMMKNQAEDNNNSLGPLPHVPAGFLPGLPFQFQERGHFRFAEDLQLPPGSMAGRLGDSLIPKSDPMEAKLQEMLRYNMDKYANQNLDTLHISRRIRELLSVHNIGQRIFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVLLLKSLIPKKDSGMPQYGRPDEGMSDDRIAHILSEASNLMKTPQGHSQASHLQQQQVQQAQQQQQQQAAAAAQHFQQAAAAAAAAAAVQQQQHAQQQSQQQPLHQNSVGQEDSHSNEDSKSPPNQSTSPFFKDSMQRRMKKYDNDDISQDKVARIYQEELAKLMTRGPRDAFQSFLFPHFFSGGMPPAAANANQPQMPDENIRMALEAYHRELAKLQQTGGALPNFPNLPGLLALQQQALNGAQDLTCKKDKSMKVNGQQNSFSMETADQNTKDSTSASDEALRHSSAFSLVRPKQEPGTPAPTTTAATTPSTAPSPLSNSILPPAMTPSDDFSSSASPLQRMASITNSLITQPPVTPHHNTPQRPMKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGSPQIPAGINPKMVPMQKMMNEMKMQDAPQHLMQLQASAMAHIPTSQHQGMLLTPPGLPPHHAISLPSHNDKKQMMMPSVHSPQQNNAMRGMHQHMSPTVYEMAALTHDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQALKIERREASKRRRSTGPGTQDNSSDTSSNDTADFYTGSPGPGSVGSGAGVPPNKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELGLATRTITNWFHNHRMRLKQQVPHGTPSEPVPSRENQSATPFDPVQFRILLNQRLMELQKERMGLSGVPIPYPPYFTTNPNLAALIGRGLLPGNEPSLAALNNAFKEQMSGLDLTMNALKRERNDDFEDDGEEESHLSDAESLDGSDVKSENLKETPSSSSRLSGGSMVQSRTSRRKPAAPQWVNPDWQDGAGGPPPPGPITEPEVIINGVCVMQNQAADYSRKAGSEETVRVEPTDVQDHHRSFDDDAEEDCASDADDDEGRRSQMSNKHSEPEIVNENDENDLADEKNEDCESVVEDDTPSGGRSGGNKNGDSKAEEIDDDDEEEGDSGWHY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00793432;
90% Identity
iTF_00793432;
80% Identity
iTF_00793432;