Basic Information

Gene Symbol
Arid2
Assembly
GCA_905115235.1
Location
NC:86739580-86761286[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 5.7e-26 1.3e-22 79.6 0.0 2 89 47 132 46 132 0.95
2 3 5 1.1e+04 -3.6 0.4 27 70 1470 1515 1453 1524 0.59
3 3 1.2 2.7e+03 -1.6 0.0 5 33 1864 1891 1860 1893 0.79

Sequence Information

Coding Sequence
ATGACGACTTCAGACCTCAAGGATGCCAATAACAAAGAAAATGCACAGGCGGACGATTCCGTGAGCAGTACAACGAAAGGGAGTGCGAGTGCAAAGAAATCAAGCAACCGGACGGACTTCATTTATGATGTCCGCGATCGGGAGTCGTTTTACAAAGACCTTCAAGGGTTTCACGAGAGTCGAAACACACCGATCGTGAGATTCCCGAAAATTAATGGGAAGGAAGTTGACTTACACAAACTTTACGCTGAGGTGGTGAAGCGTGGCGGATGGCTAAAAGTTAACATTCGCAATGAATGGGATGAACTGCTTCATATACTGGGCATCAACCAGAAATGTGTGAATGCACCGGTTGCGATTAAGCATATCTACACGAGGTACTTGGACAAGTATGAGCGACTCCACTTTTTGGGCGAAGATCCAGACCGCGCGGATGAACCGGACGACGAGGGACGCCACAAGAAGTGGTCTGCCAAGAACTTCACTTCTGTCCCTATGACCTACAACTACAGCCAGCATCAGGTGTCAGAGCCGCTACGAGTGCTACACCGCCTGTCCACGGATATGTTTAAGCCGTCGGAGTACGATAAACTGATGTTATCGCTCCTATCGCCTTTGCCAAATGAACAGGATTTTGCGATAAATGTGTGCACCTTGATGGCGAATGAAAGCCAGCACACACTAAAGTTGGATCATTGTCCGAAGTTGGTGGATGTCTTGATAGCACACGCCGGGGTATTCTCTCACTTTTCAATGCGCGACATATTCGTTGAAATGTACACGAAAGTCCGTCGACATTCTCTCCAGACCTTTTGGACCGATTGCCTCTACGACAAACCGCCGATTCTCGAACTATCGTATGATGATTATTTCCAAGCTCCTGATGAAAAATTCGAAGATATGGCAGCATATCGAACTTGTGAACGGTTACCGTTTCGGGGAAATGGAGAAAATGTAAATGCGGTTGATCCCGAAGAATACAAAAACGACGTTGGAAGATATGATTTTCTCTGTTTGGGTCGAGGACTGGGAACGCACGATTATGTTGGACAACGTGTTCTGCAAGTGACGTCAATAATGCGCAatttaagtttcttcgaagaaaaTTTATCCATTTTCGCCACCAATAGAACTTTCCTACGGTTTCTTGTAATGTGCGCAAATGTACGTTGGGGCAATTTACACCACATGGCATTcgatatttttggaaatatagCAACGCAAGTAAGTCTGCGCGATCCAACATCAGATGAGTTAACGCGCTGTATTCTAACAACGATTTGCGAAGGTTTGGAGGGACAAGATCGGGGAGTCATAATAAGCTGCTTGGAGATTTTGAATAAGTTGTCGCagaaagatacaaatgcaaACGACTTGAATAAATGTTTAGATTTTAAGACATATAATCAAATTTGTCTGTTCTTGGCCTTGAATGATATAATGTTATTGCTATACACACTTGAATGTCTTTATGGATTGAGCTCACTTGGCCCGAGACCTTGCAACTCAATCATCCAAGTTAAAGGCATTGTCGACACATTGGTTTCTTTAATCACTGTTGAGGCACAAAGTTACGGCCCAGATGGTTGCATTTTGATGCGAGTTGTAGAAACGGTTCCTGGCAATATGCTTCCAATGGTTGCCCAAAATATTGCGAACTTACAAAATGTCGCTATGCAAGGACATGTTTTGGCAGCTAAGAAGGAGAGTCATCCGGAAGCGGCGCATGCCACAGCAACAAATCCCGAGCCGCAAAAAGCAATCGTAGTACCGCCTTCGCCATCAGCACGTCCAAATTTGCCAGCGGGGTCAAAAGATAACATAACTACCCCTGCAACACCTACTACTAATAAAACTGCACCTACTGTACAGGAAAGTGATCCATTCGCTTTGGCCTGGGTTACAGCGACCTTTGAATCAATTGTATCACCCACGAGTCGTGTGGAGCAGCAAGAATTGTACAAGATGTATTTAGCTGCTTGTCAGAAAGCCGGGCGTCGTGGTATTGTTTCACCCATTCACTTCCCTCAGATCGTCCGGACAGTACTAGGTTCAAATGTGGGACCCAACCTAATAAAAACCACCGAAGCTAACGGAATTGAATTAAACGCATTTTACTATATTAATATCCGCATGAGAGCGAATCCTATGCCCGTTCAGTATAAAGTATCACCAATGCAAGCACCACAAGCCAATCAGTCACCAACCATACAGAAAGTTATAACGAAGACTCCAACTCAATCGCCGGCAACCCAACATCAAGTGAAAGTATCGCAGCAGGCGTTAACTGAAGCACAGGCGATTAAAAAACCGGAGGTAGGTCAAAAGGGGAAAACAATCAAGAAAGCCCAAGGGCAACCACCAATGCAAATGCAAGCACAGCAGGCTCAAACACCACAAGCCCAAGTACAGCAAACAACCCCAGCCCAGCAAGCTAGTCAACAGCAAATCCAACAGCCACCGCAACCACAAATTGTAACCCAGTTGCAAGAAAATCAGCTAGTAGCAGGCAAACATGTCATTATTAGTCACAGCGTTACTCCACAATCGATTGCACAGAAAGGTGTTCCACAAACTGGCGCTACAGAATCAAACCAATTAAGCGTGATTCAACACCCTCAACAGCACCAACAACCACAAATGCAGATACAGCAGCAACCGCAACAAGTTCAAGTGTCGCAGCAAATTCAGGTACAACAGCAACAAATTCAGCTGCAACAACATGTTCAAatgcaacagcagcagcaggtgcAGATTCAACAACAACCGCAGCCAATGCAAATCACACCGCAAACACCACAACAAATTTCAATGCAATCGCCACAAATTGTAGTGAATCCAAATAATTCTGCTATTGTACAAGGCAATGGAAATGTGCCGCAAACATCTTCGTCTTTAATTAAAAGTCTTCTGGCTAACAAGGTAACAACATCTCCTACTTCCACTTCAGATGTAAGCGAAGCGAATGCGAGTGCAGCTCCAAATAATCCAAGTTGTTTGATTACCCAAAATGTTAATTTGCATCagGTAGCTCAGCGTCAACAAATGAAACAGAAAGAACTAGCTCAGCAACAAgcgcagcaacaacaacaaagtgTACCACATGCGAGCATAAGTGCTTTGATGAATAATCCAGTTATCCCCACAAGCGCAGTGAAAGTTGGTCAAACTACAATTAAAGCAATAAGCACAAACGCAGTTATTCCTGCTGCGGTTATAGAGAAGAAAACGACTAACACTTCATCTCTTCAGCAACCTCAGTCACAAACTTCCATTGATTCGACTGATAACAGTAGCTCGAATTGGGATCCCGTGCCGCCTTTGGCACCATTAAGTGGGAACTTGCAGAATATAAAAATTCCAAGTAATGTTTTGATAACTCCCGGAAATGACGACTCTAATTCAACGGGAAATAATTCAGTCGCTTCCAGTGCCATCAGTTCCACACAGGTGATAACCACTGATGATGGAGAAGGTTCACTTATAAGTTTCGAGGGCCTTTTAGTTCCAAAATCTAAATCGGGCAGTTCTTCGGTGACCGAGGACGACATCTCCAAGGATTCATTCAATAAAACTGCGCAAGGGTTCCAAGGAAATCAGATGCTTGTGGATTTGTTGGATAAAAAGTCCCCGGATCTTCCGGTGCCGTGTGGTCCTGCGAAAAGGAAATACGAGGAGGAACCAATCAATGAAGGTAGCATTATCCAAAAGCGACTTGCAACTGATAACGATGAAATTGATGATGACGAAGAAATGCCCATAGTTCAAGCTTCTAAAAATGCTGCCAATCTTTATGCCGAAATGGCTGCTTCTATTCTCGAAGATGAAGATTTAGAAGATGAACCCGAGCTCGAAACTACCATTCCAGTGATTCAACCTCCCGTCGAGCAGAAACAAGTCATTACCATGCCTGTTCCTATCCAAAGGCAAATCATCATGGGACCAAATAACCAGGTTATTTTAACGCAGCCAGGTCAACCAGTAAACCAACCTGTTCCACCTCAAGCTACAGCAACGATAAAAACAGATTCAGGATTGCAAACGGTTCCCTTAATAATTCAAAAACAAATAGGTCCAAACGGGCAACCAATAATTCAACCTGTAATTCAACAGCAGCATCAACATCAAACGCAGTACGTATTAGCAACGAATCCGCAAGGTCAAACGTATCTTGTAGCGCAACAGCCACAGCAACAGCAGCCTCTCAACCCAGCATTACTTCTCGCTCAAACTGGACAGCAGCAAGGCTCTCAGACAAAAACCATTATCATTTTGCAACAACAAGGAGGACCACCACAAGCTGTGGCGCAACagcaaataatttcaaatccCGCTGGACAACAGAAAGTTATCATGACCACACAACAAGGGCAGCAAATGATAGTCACTCAAGTACCTCGACCTGTACAACATCATCAAATAATTGTCAGTAATCCAAACTCGAATATTATGCAAAATGGGTCTCCTCAAAACGTAATAATATCCCAAAATTCTTCAATGGTTCAACAATCTCAGATGCAGCAACAGCAACACAtacaaattcaaacaaattcaGCTGGTCAGCAACACCTTCAAATCCAATCGGCACAAGGTACTCAACCCCAGATCCAGCTTCAAACTTCTGTACCACAGccccaaattcaaattcagTCATCCTCTGCTTCTCAAAGTCAAATGCAAATCCAAGCACCACCGTGTTCTCAACAGCAATTCCAGATTCAAGCTGCATCTCATACAGTCATTCAAAAGCAGATGCACCTGGCTCAAGTTGGCGGCGTATCAGTTCAAGTAAACCAATCTCCAACGACTATTCAAAGTGCCACGAATCAGCCTTCAATTACTATTCAGCCCCAGTTAATGCAGCAACCGGCTTCTATCATCCAATCGCAGGGCAATCAACAACAAACATCGCTCCAAACACAGCAGCAAGCTTCCATTTTATCTCAACTGCCACATATACCTGCTACAATCAAAATTCATCCGTCAAGCACCCAAACGAGTCAGACACAAACGAAAGCATTACCTAAACCTCAAATATTGGTACAACAGCAATCAACTATTCCCCCAGTCCCTTCGCAGCAACAATCTGTAATTCAAACGACACGTGCTGAAGTAAAGCGGCAGATTATAGTGACTGGGTCGGGTACAATTGAATTGTCGGAAAACGCAAAAGTAGGAATAACAGCACCTCCACAAGTAACATCTCAGCCTATTCACCAAGGGCCGACATCAGTCCATCAGGCTACCCAACCGACGCAGCCACAAGTTAATCAAGTAATGCAGCCGCAATCGCCACAGCAACCATCATCTCAGCTTGTACCCAAGAGACCGAATAAACCCGACACACCAGCTGCAGACGAGGAAACTTTCGATCAGAATTGGTTATGGATTTGTGACTGGCGAGGGTGCCCAAGAAAGCAGTACAAATCGCTAGCAGAAGTGTACAGGCATGCGTGCACTGTACATTGCCCGGAAAGTTTAGATCCAGCAGCTGAAATTTATTGCCAATGGGGTCCTGGAAGCGGATTATGCGATAATATACCACGAAAAAGATATTCATTAATGACCCATTTGCTAGACCGTCATTGCACCTTAGAGTCACTGAAAGCTGCCTGCCAGAGAAGGGCAACTACGGGAATTCTCCCACCAGTTCATGGGCAACCTGTAACGATTATTAAAAATGTCCCGTCGAATTCCAGCGAATCACGCGGAACCGCATCGCCAGCTTTATCTACTTCGTCTAGTAGCTCTCTTCCACCCGCTGCAAGCGCCGCAATGCATGCGATAAAACGACACTCAAATGATTTTGTCAATCCCAAGGAATTGATGgatgaaaatgaaggtcCAGTAACAAAGAGTATTCGTTTGACTGCGGCGTTGATTCTCCGCAATTTAGTAACCCATACATCATTAGCAAAGAGGAATTTGCGGTGCTATGAGCCTCATTTGGCGGGGGTTGCTCTGAGTAATGTTGAATCGAGTAGAACAATATCACAAATACTTTACGAGTTGAATAACTAG
Protein Sequence
MTTSDLKDANNKENAQADDSVSSTTKGSASAKKSSNRTDFIYDVRDRESFYKDLQGFHESRNTPIVRFPKINGKEVDLHKLYAEVVKRGGWLKVNIRNEWDELLHILGINQKCVNAPVAIKHIYTRYLDKYERLHFLGEDPDRADEPDDEGRHKKWSAKNFTSVPMTYNYSQHQVSEPLRVLHRLSTDMFKPSEYDKLMLSLLSPLPNEQDFAINVCTLMANESQHTLKLDHCPKLVDVLIAHAGVFSHFSMRDIFVEMYTKVRRHSLQTFWTDCLYDKPPILELSYDDYFQAPDEKFEDMAAYRTCERLPFRGNGENVNAVDPEEYKNDVGRYDFLCLGRGLGTHDYVGQRVLQVTSIMRNLSFFEENLSIFATNRTFLRFLVMCANVRWGNLHHMAFDIFGNIATQVSLRDPTSDELTRCILTTICEGLEGQDRGVIISCLEILNKLSQKDTNANDLNKCLDFKTYNQICLFLALNDIMLLLYTLECLYGLSSLGPRPCNSIIQVKGIVDTLVSLITVEAQSYGPDGCILMRVVETVPGNMLPMVAQNIANLQNVAMQGHVLAAKKESHPEAAHATATNPEPQKAIVVPPSPSARPNLPAGSKDNITTPATPTTNKTAPTVQESDPFALAWVTATFESIVSPTSRVEQQELYKMYLAACQKAGRRGIVSPIHFPQIVRTVLGSNVGPNLIKTTEANGIELNAFYYINIRMRANPMPVQYKVSPMQAPQANQSPTIQKVITKTPTQSPATQHQVKVSQQALTEAQAIKKPEVGQKGKTIKKAQGQPPMQMQAQQAQTPQAQVQQTTPAQQASQQQIQQPPQPQIVTQLQENQLVAGKHVIISHSVTPQSIAQKGVPQTGATESNQLSVIQHPQQHQQPQMQIQQQPQQVQVSQQIQVQQQQIQLQQHVQMQQQQQVQIQQQPQPMQITPQTPQQISMQSPQIVVNPNNSAIVQGNGNVPQTSSSLIKSLLANKVTTSPTSTSDVSEANASAAPNNPSCLITQNVNLHQVAQRQQMKQKELAQQQAQQQQQSVPHASISALMNNPVIPTSAVKVGQTTIKAISTNAVIPAAVIEKKTTNTSSLQQPQSQTSIDSTDNSSSNWDPVPPLAPLSGNLQNIKIPSNVLITPGNDDSNSTGNNSVASSAISSTQVITTDDGEGSLISFEGLLVPKSKSGSSSVTEDDISKDSFNKTAQGFQGNQMLVDLLDKKSPDLPVPCGPAKRKYEEEPINEGSIIQKRLATDNDEIDDDEEMPIVQASKNAANLYAEMAASILEDEDLEDEPELETTIPVIQPPVEQKQVITMPVPIQRQIIMGPNNQVILTQPGQPVNQPVPPQATATIKTDSGLQTVPLIIQKQIGPNGQPIIQPVIQQQHQHQTQYVLATNPQGQTYLVAQQPQQQQPLNPALLLAQTGQQQGSQTKTIIILQQQGGPPQAVAQQQIISNPAGQQKVIMTTQQGQQMIVTQVPRPVQHHQIIVSNPNSNIMQNGSPQNVIISQNSSMVQQSQMQQQQHIQIQTNSAGQQHLQIQSAQGTQPQIQLQTSVPQPQIQIQSSSASQSQMQIQAPPCSQQQFQIQAASHTVIQKQMHLAQVGGVSVQVNQSPTTIQSATNQPSITIQPQLMQQPASIIQSQGNQQQTSLQTQQQASILSQLPHIPATIKIHPSSTQTSQTQTKALPKPQILVQQQSTIPPVPSQQQSVIQTTRAEVKRQIIVTGSGTIELSENAKVGITAPPQVTSQPIHQGPTSVHQATQPTQPQVNQVMQPQSPQQPSSQLVPKRPNKPDTPAADEETFDQNWLWICDWRGCPRKQYKSLAEVYRHACTVHCPESLDPAAEIYCQWGPGSGLCDNIPRKRYSLMTHLLDRHCTLESLKAACQRRATTGILPPVHGQPVTIIKNVPSNSSESRGTASPALSTSSSSSLPPAASAAMHAIKRHSNDFVNPKELMDENEGPVTKSIRLTAALILRNLVTHTSLAKRNLRCYEPHLAGVALSNVESSRTISQILYELNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-