Hill003936.1
Basic Information
- Insect
- Hermetia illucens
- Gene Symbol
- retn
- Assembly
- GCA_905115235.1
- Location
- NC:58429732-58652163[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-26 3.9e-23 81.3 0.0 2 89 225 310 224 310 0.96 2 2 0.53 1.2e+03 -0.4 0.0 3 37 406 440 404 444 0.84
Sequence Information
- Coding Sequence
- ATGGATGTTGGCCGCAGCAGTGAAAGGGATTTGGATTTAGGCGATGATTCAGCCATGTCAAATgatgagcactcagaccatgaGGATGATGTAAGGGATTGCGATTCAAGTGACGAAGGAGCACCCATCAATTCAACAATGAATGGAAATGGAATGGATTACTCAAGGGCTACAGAAGACAATCCAGATATACCACTGAATAGTCATCATCCACAGTTTCCACAAAGTCACACATTAGGCCTGCTTGGTAATTTTATGGGCGTTCCTGGTCTACAAAATTTGCCAAACTTACAACATGGTGATGtcctggaaaaattaaaaatgcaagTGAGAGACATGAAAGTTGGAATGATGGATCAAGACTATGCACCACACAGCACATATGGCTCCACATTACCTCCATCAGGTGCAGCAGGGTTTCCACTTGCACAGTCTAATGGCTTAGGCCAACCACAAAATTTATCACAAACACCAACTTCGGTATCACATTCGAATGGGTATCCATTCGCATCGCCTAACAATAATGTTCCAAGTTCTAAAGATGCAAACCCAAGTTCAAATGCATCAAGCTCCAGCGAGGCTTCAAATTCGTCGCAACAGAATAATGGCTACAGCTTCGAAGAACAGTACAAACAAGTGAGACAACTCTACGAGATCAACAATGATCCGAAGCGGAAGGAGTTTTTGGACGATTTGTTCTCATTTATGCAGAAAAGAGGAACTCCAATCAATCGTCTACCGATAATGGCCAAATCCGTGCTGGATCTCTACGAATTGTACAATTTAGTTATAGCGCGAGGAGGCCTTGTCGATGTGATAAATAAGAAGCTATGGCAAGAAATAATTAAAGGATTACATTTACCATCTAGTATAACGAGTGCAGCATTTACATTAAGAACCCAaTATATGAAGTACCTGTATCCCTACGAATGCGAGAAGAAGAACTTGAGCACTCCCGGCGAGTTACAAGCTGCCATCGACGGGAACAGGAGAGAAGGCAGGAGGTCGAGCTACGGACCCTACGACGGCATGCAAAATCAGCTACAATTGCCACAAGTGCAGCGCCCACCTGTTCCGAATAGTATGCAGCAAATGTCGCCGTTGGCCCTGGTCGCACACGGCAACGCGCCGTCCGCCCATCATCGGATGCTCGCCCCACACCTGAATCAAATGGGTATCACACAGCACGAAATCGAACAGCGGATGATGGAGTACATCAAGTTCTTCCAACCCCTCAAGGATGCCCACGCCGCCCAGACACCCAACCTGGAAGCTTTGAATGCTCTGGAGATGTCTCGCGTTGCACTCTGGTCGCTCTACGGCAACAACACAAGTCCACCCGCCTCGAATAACACCAGCCCACAAGGTCCAATTGAGCCACAGCGTGAGGCGTTGAACCTTTCCGAGTCGCCACCTAGTGTGAATATTAAGCGGGAACGCGACCACCCGGAACCTGAATCGCCATCAGTCGACAGAGAGCGCGATTTCGCACATCCGCCGCCTGCAAAAAGCTTCCGGGGACCGTTCCACATGTCACACCCCGACGACCGGGACGCCGATTTATCAGCAGATGAACACGCTCCGGGTTTGGTGAATTCACGCGTCCAGTACGATGAGCACCACCACCATGAAACGAATATTAGCAACAAACCGAGCGTTTCACCACCGCCGCACGCACCCAATGGAGTGTCGGAATCTTGTGATTTTCCGTTACTAACTGGGATGCAGTTCAAATTGGCGCGTAGAGGTAATTCGGCCAATGGCGAGCAACAATTAGTTGTAAATTTAGAAGTAAATGGTGTCCACTACGAAGGTGTATTATTTGCAAACCCTTCAGCACGTTCATCCCCATCAGCGAATACATCAAAAGCATCAACGACCGACGCGAATTCGTCAATTGACGAACGAACGCATTCGTTAGTTTCATCTTAA
- Protein Sequence
- MDVGRSSERDLDLGDDSAMSNDEHSDHEDDVRDCDSSDEGAPINSTMNGNGMDYSRATEDNPDIPLNSHHPQFPQSHTLGLLGNFMGVPGLQNLPNLQHGDVLEKLKMQVRDMKVGMMDQDYAPHSTYGSTLPPSGAAGFPLAQSNGLGQPQNLSQTPTSVSHSNGYPFASPNNNVPSSKDANPSSNASSSSEASNSSQQNNGYSFEEQYKQVRQLYEINNDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPGELQAAIDGNRREGRRSSYGPYDGMQNQLQLPQVQRPPVPNSMQQMSPLALVAHGNAPSAHHRMLAPHLNQMGITQHEIEQRMMEYIKFFQPLKDAHAAQTPNLEALNALEMSRVALWSLYGNNTSPPASNNTSPQGPIEPQREALNLSESPPSVNIKRERDHPEPESPSVDRERDFAHPPPAKSFRGPFHMSHPDDRDADLSADEHAPGLVNSRVQYDEHHHHETNISNKPSVSPPPHAPNGVSESCDFPLLTGMQFKLARRGNSANGEQQLVVNLEVNGVHYEGVLFANPSARSSPSANTSKASTTDANSSIDERTHSLVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -