Basic Information

Gene Symbol
nfil3
Assembly
GCA_905115235.1
Location
NC:3648920-3783688[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1e-13 6.8e-11 41.6 4.3 2 56 128 182 127 190 0.90
2 2 0.0092 6.2 6.5 0.0 34 61 519 546 516 548 0.88

Sequence Information

Coding Sequence
ATGGTGGCGGAATTCGTCGCCCGACAGCAAAGCGGCTCCCCAGTTAACGGAGAGACACCACATCAAAATCACACTCCATCCAATATGCCAGCACATGGTAATGCCAATAATTCAGACATGCGTCTAGACACAAGTTCATCAATATtacaaataaatacaaattCATCACAATCATCAAATAGCAGAATGTTGAATTCAAACGGACAAAACGGACAAACATTTCTCCATGACCATGGCAATCTGCTGCTAACTCAAGATGCAATGAGCCCACAATCACCAGGAAGTGACAATTACATTGGATTTGATCTGGCTGCACAATTGAAACGTAAAGAGTTATTTACACAGCGAAAACAACGTGAATTTATCcctgaaaataaaaaggacGATAGCTACTGGGATCGTAGACGTCGCAATAACGAAGCAGCAAAGCGATCACGGGAGAAGCGTCGATACAATGACATGGTACTAGAGCAACGCGTTGTTGAACTTACTAAAGAGAATCATGTCCTGAAAGCACAGCTAGAAGCAATCAAAGACAAATTCAACATCACTGCAGAGAATCTTGTGAGCGTGGATCAAATCATGGCCACATTACCTACCAGCGAACAAGTTCTAAGTATTACAAAACGCGCTAAGCTAACAAACAGTGTACCACCAACTATAATCTACCCAGGATCACCGAGTCCAGCACCTCCATCCACAATTCATCAACCTTTAGGGGTAGActctccaccatcgccgacaagACTTCACCACTCGCAAGTCGCTATCCATCAACAGCAGCCGCAACAGCCCCTACAGCCTCAACCTAAACTTCAGACCCAAGCCCCTCCATTGGCGCCCCATCATCACTTCCGCTCCTGCCAGTCCAGTTCACCACCACATATGGATTATCGCGAAGCGGAGGTATCCTACCATCAGCAGCATGCCAGAAACCCCCCGACGTTGCATCACCACCATCGTCATCACCATCCATCGCATCCCCACGTACAATTCACCACGACTGCCAACATCACTACATTACCAGCTACTAGCAACGTCCCAGCGCCAGTATCCGCTGCTTCCCAACTTTCAGCCACGGCGGCAGTTGCCCTTGCCACAAATATCTCCAACATTTGCTATACCGCAACGggtgctgttaatgttcttgctGCAGCTCAGGCAGCCGCAGCCGGTACTCCTCTGAATGAGCTGCATCCATATGATGCCACCCTGGTCACGGCAGCTGGCAATGTCCTGAACTTATCACGTCGTGCTCAATCACCCTATGAATTGTCTAGTGGTGCAGGATCTGGCACAGCTTCAGGGGATGATGAACAATGTGATAACCAACCCTCTAATGATATAAACAATAGTTTGCCCCTGAAACTACGGCACAAATCTCATTTGGGTGATAAGGATGCTGCTACAGCTCTGCTGGCTCTTCAGCACATCAAACAGGAGCCAAGCTCCCGTTCACCACCATGGGATGGAGAAGGATCGAGTGATGAAAGAGACTCTGGTATTTCAATTGGTACGGATTGGGTGGCAGGATTTCAACGGAAAACGTCACCGGTCAATGATAAGGAGGAGGAGAATATTCATCTGAAATCCCAGCTTGCCCGGCTGGAATCTGAAGTTGCCACAATAAAAAACATGATGATCCTGAATACAACGCCTGGACAAGGTGCAACGGCTACAGCCCAGTAa
Protein Sequence
MVAEFVARQQSGSPVNGETPHQNHTPSNMPAHGNANNSDMRLDTSSSILQINTNSSQSSNSRMLNSNGQNGQTFLHDHGNLLLTQDAMSPQSPGSDNYIGFDLAAQLKRKELFTQRKQREFIPENKKDDSYWDRRRRNNEAAKRSREKRRYNDMVLEQRVVELTKENHVLKAQLEAIKDKFNITAENLVSVDQIMATLPTSEQVLSITKRAKLTNSVPPTIIYPGSPSPAPPSTIHQPLGVDSPPSPTRLHHSQVAIHQQQPQQPLQPQPKLQTQAPPLAPHHHFRSCQSSSPPHMDYREAEVSYHQQHARNPPTLHHHHRHHHPSHPHVQFTTTANITTLPATSNVPAPVSAASQLSATAAVALATNISNICYTATGAVNVLAAAQAAAAGTPLNELHPYDATLVTAAGNVLNLSRRAQSPYELSSGAGSGTASGDDEQCDNQPSNDINNSLPLKLRHKSHLGDKDAATALLALQHIKQEPSSRSPPWDGEGSSDERDSGISIGTDWVAGFQRKTSPVNDKEEENIHLKSQLARLESEVATIKNMMILNTTPGQGATATAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-