Hlin035561.1
Basic Information
- Gene Symbol
- Zmiz1
- Assembly
- GCA_026182355.1
- Location
- JAPFBL010000253.1:5041046-5062389[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.041 7.4e+02 2.0 0.6 4 24 241 261 238 267 0.90 2 2 7.6e-26 1.4e-21 78.0 3.9 1 50 322 371 322 371 0.98
Sequence Information
- Coding Sequence
- ATGTACCCAAGCAGGAGAGTGGCTCCGTACCCTTCGCCAGGCATGCACCTCCAGCAGAAGAGGGCGACGCACTTCTCCAGCCAGCAGCAGCCCAGTCTGCAGCAGAGTCCCTTCCCTCCCACCAACCCGGCTGCCGCACAGTATGGCGGAGGCGGAGGTGGGTACGGTGGCGGCGGGGGTGGACGAGGGGCCTTCGGGGGCTTTGGAGGCGGCAGGGGGGTGAGGCAGCAGCAGGCGGCACCCTACCAGCAGTATCAGCAGTACCAGACGGGGGCGGCCGCCTTCCAAGAGCGTCCTCCAGGCTACAGTCCCGCCGGCCTGCCCGCCAACCCCACGCCGCCCCTCACTCCCGCCGCCCAGCCGCCCCCGTCTACCTACCCGCCGGACGTCAAGCCTCCCTTCTCCGACCTCGCCAAGCCTCCGCACAAGGACGATGAGTTGCGGCTTACGTTCCCCGTTAGAGATGGCATCATCCTACCCCCCTTCAGGCTGGAACACAACCTCGCCGTCAGCAACCACGTCTTCCAACTAAAGCCTACAGTTCATCAAACTCTAATGTGGAGGTCAGACCTGGAGCTGCAGCTCAAGTGTTTCCACCACGAAGACCGCGCCATGAACACTAACTGGCCGGCCAGCGTCCAAGTGTCCGTCAACGCCACCCCGCTCTCCATAGACAGGGGCGAGAACAAAACCTCGCACAAGCCTCTCTACCTCAAGGACGTCTGTCAGGCCGGCCGCAACACCATTCAGATCACAGTCTCAGCTTGCTGTTGTTCTCACCTATTTGTTCTGCAATTGGTCCATCGACCGAGCGTCCGCAGTGTCCTCCAGGGCTTGCTGAGGAAGCGGCTGCTCACGGCTGACCACTGCATTGCCAAGATAAAAAGGAATTTTACCAATACTGCCTCCACCTCTCCTTTCGGCTGTCAGGACAAAGACCCTGTGGAGCAAACTGCTCTTAAGGTTTCTCTTAAATGTCCCATTACTTACAAGAAGATCACTTTGCCTGCCAGAGGAAATGAATGTAAACACATCCAGTGCTTTGACTTGGAATCCTACCTTCAACTAAACTGTGAACGTGGTTCGTGGAGATGTCCTGTCTGCAATAAACCAGCTCAGCTAGAGGGTTTAGAGGTTGACCAATATATGTGGGGCATACTGAACACCCTCAATACCTCTGAAGTGGATGAAGTGACGATTGATCCCTCCGCTAACTGGAAACCTGCCAGGCCCAATAACCTGCACTCGGTCAAGACTGAGGAAGAAAACCCTGAGTCTTGCAGTGGAAAACGAGGCGGTGTGATGAGCAAGGCCATGTCTCCTGGGAGTATGTCACTGCCGACCATGAACAACTGGGACATGAACCAGTCCATGTCGCCCTACATACCTCCCGACATGAACAGCATTGCCAGCGGATCCATGATGTCCGGAGGAGGCGGCCCGCCCCCCTATGGCCAGCAGTCGCTCGCTCCTAGGACTCCCTACGACTACAACCCCGCCTCCACGCCCCAGCAGCCCGACTTCCCCGCCTCCCACCTCACACCCGACCCTTCAACCCCTCTGGACCCCCTCAACGCCATGGAAAAGTCCCTTAATGAACAGATGCCTCAGACGCCACATACTCCTCATACTCCACACACACCGCACACACCAGGAGCTCCAGGAGGACCTCCCAGTGTACCACCCGCCGCCCCCGGAGGCGAAACACCCACTAGTAGCAGCGGGGGCGGCGCCACTCCCACACAACCTTCTGCTGCACACCCTACCACACCCTCCGCAGCAGCCACTGATGAACTGCCTTCGGACCTTAACTTTGACCCGGCTGCCGTCATTGATGGTGAAGGCCACGGTCAAGAAGCTCTCAATCTTTTGCCTGACAACGTAGTGGACCCCATGGAGCTGTTGTCCTACCTGGACCCCCCAGACCTCGCCACGCCGCCCAGCAGTGGTGCTAGCAGTAACGGCGGCAACATGCCCACCCCCACGACCAGCGCGGGAGACGACATCCTCGCTCTCTTCGACTAA
- Protein Sequence
- MYPSRRVAPYPSPGMHLQQKRATHFSSQQQPSLQQSPFPPTNPAAAQYGGGGGGYGGGGGGRGAFGGFGGGRGVRQQQAAPYQQYQQYQTGAAAFQERPPGYSPAGLPANPTPPLTPAAQPPPSTYPPDVKPPFSDLAKPPHKDDELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVHQTLMWRSDLELQLKCFHHEDRAMNTNWPASVQVSVNATPLSIDRGENKTSHKPLYLKDVCQAGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLTADHCIAKIKRNFTNTASTSPFGCQDKDPVEQTALKVSLKCPITYKKITLPARGNECKHIQCFDLESYLQLNCERGSWRCPVCNKPAQLEGLEVDQYMWGILNTLNTSEVDEVTIDPSANWKPARPNNLHSVKTEEENPESCSGKRGGVMSKAMSPGSMSLPTMNNWDMNQSMSPYIPPDMNSIASGSMMSGGGGPPPYGQQSLAPRTPYDYNPASTPQQPDFPASHLTPDPSTPLDPLNAMEKSLNEQMPQTPHTPHTPHTPHTPGAPGGPPSVPPAAPGGETPTSSSGGGATPTQPSAAHPTTPSAAATDELPSDLNFDPAAVIDGEGHGQEALNLLPDNVVDPMELLSYLDPPDLATPPSSGASSNGGNMPTPTTSAGDDILALFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -