Basic Information

Insect: Hermatobates lingyangjiaoensis
Gene Symbol: -
Assembly: GCA_026182355.1
Location: JAPFBL010000617.1:110880-137201[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.28 1.3e+02 5.2 0.1 1 21 457 477 457 478 0.95

2 9 0.0012 0.57 12.7 1.3 1 23 509 532 509 532 0.96

3 9 0.003 1.4 11.4 1.0 2 23 569 591 568 591 0.93

4 9 0.0067 3.1 10.4 0.4 2 23 597 618 596 618 0.95

5 9 0.083 39 6.9 6.8 2 23 626 648 625 648 0.96

6 9 0.64 3e+02 4.1 0.3 1 21 1129 1149 1129 1150 0.95

7 9 4.1 1.9e+03 1.6 1.0 1 13 1181 1193 1181 1197 0.85

8 9 0.0069 3.2 10.3 1.8 1 21 1686 1706 1686 1707 0.96

9 9 2.5e-05 0.012 18.0 0.9 1 23 1738 1761 1738 1761 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.28	1.3e+02	5.2	0.1	1	21	457	477	457	478	0.95
2	9	0.0012	0.57	12.7	1.3	1	23	509	532	509	532	0.96
3	9	0.003	1.4	11.4	1.0	2	23	569	591	568	591	0.93
4	9	0.0067	3.1	10.4	0.4	2	23	597	618	596	618	0.95
5	9	0.083	39	6.9	6.8	2	23	626	648	625	648	0.96
6	9	0.64	3e+02	4.1	0.3	1	21	1129	1149	1129	1150	0.95
7	9	4.1	1.9e+03	1.6	1.0	1	13	1181	1193	1181	1197	0.85
8	9	0.0069	3.2	10.3	1.8	1	21	1686	1706	1686	1707	0.96
9	9	2.5e-05	0.012	18.0	0.9	1	23	1738	1761	1738	1761	0.96

Sequence Information

Coding Sequence: ATGGTAAAGACTGAAGACAATGGTGCTTACGATTCTCTGAATTTGGAAGACTCCAAGCTAAATCATCAGAGTGAGACTGTTGGAAATTCTATATCATCGTTTAATGAAGAAAGTATATGTCATTCTAGTACTACTGATGAACCAGTTGTTGCACATTCAAGGAATGATCTTCATCTAGTTACTGAGAGTCCATTAAATTCTCACAAATGGGATAGAGGATCAGAGCCGTCTAATAACATTTCTGAAAGGAGATGGATGCAGAATGAGGATTGGAGGACACATGGTAATAGACTAAAGGATGTACGAGTCACACATGTGGATATCATAAGGTCAAAATCTAATATTAGTTGTGACGTATTGAAGAAAGCGCGGGGTTTTTTTAAACGCACGGAATATGGAGGTAATGATGGCATGATGCAACACAATCAGAATAGAGTTAACTCTAAGACGAAGACAGAGGGAGTCGATGATGACATTATCAGAAATGGGGAAGGCAATACCATGATCTGCAATATGAAAAGAGAAGGCAATAATGACGTCATGGTGGGTGATGTAAAGAGTACTCCATGCTGCAAGATAAAGACAGAAGATAATGATGACGTTATGCTACATGATGAAGACAGTACTCCATGCTGCAAGATAAAGACCGAAAATAATGATGACGTTTTCCTACATGATGAGGACGGTACTCCATGCTGCAAGATAAAGACAGAAGATAATGATGACGTTATCCTACATGATGAGGATGGTACTCCATGCTGCAAGATAAAGGCAGAAGATAATGATGACATTATCCAAGATGATGAGGACGGTACTCCATGCTGCAAGATAAAGACAGAAGATAATGATGACGTTATGCTACATTATGACGACGGTCCTCCATTTTGCAAGATAAAGACAGAAGATAATGATGACGTTATGCTACATTATGACGACGGTCCTCCATGTTGCAAGATAAAGACAGAAGATAATGATGACGTTATGCTACATGATGAAGACAGTACTCCATGCTGCAAGATAAAGACAGAAGATAATGATGACGTTATGCTACATTATGAGAACGGTACTGCATGCTGCAAGATAAAGACAGAAGATAATGATGGCATTATCCTACATGATGAGGATGATACTCCATGCTGCAAGATAAAGGCAGAATGCCATGATGCATATGATTCAGGGAAGAATTTAAGAAAATCCAAACTAAATCTTGAGAATGAGACCATAGAAAATGCTATATCATCACATGACATCACAGGAAGTATATGTAGTTCTAGAACTAATGAAGAAGTGACAGTTAGACGAAGGATACGTATTGATAATACAAAGTCATTTAGCTATATCAGAGCAGATGATGGAACTGTGGGTTTCTTCAAGTGTTACAGCTGTCTTCAGGAGTTTGCTGATGAGAATGACTGGCAGAATCATATGAGCGAGTATTATAACTATACGGGTTGCTTTCCTAAGAAAGAGAAGATTGTCCTTAATGATATTGGATTAGAGATTGTTTCAGATAAAGGAATGATGTTTAAATGCAAGACATGTGATAGTGTGTTTGATGGGAAATATAAATTGATGAAACACTATGAAGTATTGCACAGACCAAGGCAATTACGTTGTGGTTTTTGCCCCAATAAAGAGTTTGTATGCGTTATGTATTTACTAAAGCACTTCTCACGAGTTCATCGTCCCAACCCGATGTTAGTTTACTGTCATTATTGCGAATTTAAGGCAAATAATAAAGATAATTTACGAAATCATATATCGGGTGTTCATTTTCATGTTAAAGTAACTTGTGATATTTGTCGGTCAGTGTTAAGCAAGGATAATTTACGACGTCATATGAAGTCAGTTCATGCTGATGTTGGGTATCCGTTGAGATGTACTTTATGCAAGTATAGGACGCATCATAACTCGTATCTTCGTCAACATGTTAGAAGACAACATTCAAAGAAAGTTAAAGTTTGGAAATGTAATCAGTGTTCTTATGAAACAAAGGAAGGAAGAAAAGCTGTTAACGACCATAGACTTTTAAAACATAGTATGGTTTTAAAGAATAAGGGAGATAACGTCATGGTTCATGATGAGGGCAGTACTCTAGACGACACGGTAAAGGGAGAAGACAATGATGACGTCATGGCCCATGATAAGGGCAAGGTAGAGACGGAAGGCAATGATGACGTCATGGCCCATTATGAGGGCAATACTCTAAACAGCAAGGTAGAGACGGAAGGCAATGATGACGTCATGGTATATGATGAGCACAACACTCTAGGTTGCAAGGTAAAGAGAGAAGACAATGATGACGTCATGGTCAATGATAAGGGAAGTACTTTATACGGCAAGAAAAAGAGAGTGGACAATGATGACGTCATGGCACATGATAAGGGAAGTACTTTATACGGCAAGAAAAAGAGAGTGGACAATGATGACGTCATGGCACATGATAAGGACAGTACTTTATACGGCAAGAAAAAGAGAGTGGACAATGATGACGTCATAGCACATGATAAGGGAAGTACTTTATACGGCAAGAAAAAGAGAGTGGATAATGATGACTTCGTAGTACATGATAAGGGAAGTACTTTATACGGCAAGAAAAAGAGAGTGGACAATGATGACGTCATGGCACATGATATGGGAAGTACTTTATACGACAAGAAAAAGAGAGTGGACAATGATGACGTCATAGCACATGATAAGGGAAGTACTTTATACGGCAAGAAAAAGAGAGTGGACAATGATGACTTCATAGTACATGATAAGGGAAGTACTTTATACGGCAAGAAAAAGAGAGTGGACAATGATGACGTCATGGCACATGATAAGGACAGTACTCTAGGTTGCAAGATAAAAAGAGAAGTCCATGATGACGTTTTGGTACATGATGAGCACAGTACTCCTTACTGCAAGATAAAGAGAGAATACAGTGATAACGTCATGGAGGATAATGAGGACAGTCCTCTATATCGCAAAGTAAAGAGAGAGCACACTGATGACGTCATGGTACATGATGAGTACAGTACTGTTGGTCGCAAGATAAAGAGAGAAGACAATGATGACGTCATGGCACATGATGAGAACAGTACTCTAGGTGACAAGATAAAGAGAAAAGACAAGGATGACATCATGAAACCAGATAAGCACAGTACTCCTTACTGCAAGATAAAGACAGAAGACAACTATGCATATAATTCAGTGAAGAATTTAGGAAAATCCAAACTAAATCTTGACAATAAGGCTATTGAAAAAACTACATCATCACAAAATAAAAAAGGCAAATATAGTTCTAGAACTAATGAAGAAGTAAGCGTTAGACGAAGGAGACGTATTGATAATACAAAGTCATTTACTTTCATCAGGGCTGAAGATGTAAGTGAGGGTTTCTTCAAGTGTTACAGCTGTCTTCAGGAGTTCACTGAAGAGAATGATTGGCAGAATCATATGAGCGAGTATTACAATTATGTTGGATGCTTTCCTAAGAGAGCAAAGAATTTTTTTAATGATATTGGATTAGAGATTGTTTCAGATAATGGAAGGATGTTTAAATGCAAGACATGTGATCATCTATTTGGGCAGAAAAATTCAAGAAATGATCTTCATCAAGTTACTGAGAGTCCATCAAGTCCTCCTGAATGTGATCGAGGGCCAGCCCCTTCTAAAAAGATTCCTCAAAGAAGAATTGTGCGCCGTGGAGGCTGGAGGAAAAATGGTGTTAAAATAAAAGATGTTCGTGTCAAACTTGTGGACATATTGAAGTCAAAGTCTATTATTAGTTATGACGTCATCAAGCAAGCGGAGAGTCTTTTTAAAAGCAAGGAATGTGAAAGTAATGATGTCATGATGCAACACGATCAGAATAGAGTTAACTTGAAGACGAGGACAGTGAGAGACGATGAAATCGTCATGGGACATGGCGAAGGAAATACCATGATCTGCAAGACAGAGACAGAAGACATTGATGACATCTTGAGAGATGGTGAAGTCACTACCATGATCTGCAAGACAGAGACAGCAGACATTGATGACATCTTGAGAGATGGTGAAGTCAATACCATGATCTGCAAGACAGAGACAGAAGACAATGATGACGTCTTGAGAGATGGTGAAGTCACTACCATGATCTGCAAGATAGAGAAAGAAGACAATGATGACATCTTGAGAGATGGTGAAGTCACTACCATGATCTGCAAGACAGAGACAGCAGACATTGATGACATCTTGAGAGATGGTGAAGTCAATACCATGATCTGCAAGACAGAGACAGAAGACAATGATGACGTCTTGAGAGATGGTCAAGTCAATACCATGATCTGCACGATAGAGAGAGAAGACAATGATGATGTGATGATAGATGGCAAAGGTAATACCAAGGTCTTCAAGTTAGAGAGAGAACACAATGATGATGTGATGATAGATGGCATAGGTAATACCAAGGTCTTCAAGTTAGAGAGAAAACAGAATGATGATGTGATGATAGATAGTGAAGGTAATGACATGATCTGCAAGTTAGAGAGAGACCAAAATGATGATGTGATGATAGATTATGAAAACATTGCCATGATCTGCAAGATAGACAGCGAATTCAATGATGATGAGATTATAGATGGCAAAAGAAATACAAAGGTCTTCAAGTTAGAGAGAAAACACAATGATGATGTGATGATAGATGGGAAAGACAATACAAAGGTCTTCAAGTTAGAGAGAGAAGATAATGATGATGTGATGATAGATGACAAATGCAATACCAAGGTCTTCAAGTTAGAGAGAGAAGATAATGATGATGTGATGATAGATGACAAATGCAATACCAAGGTCTTCAAGTTAGAGAGAAAACACAATGATGATGTGATGATAGATGGGAAAGACAATACAAAGGTCTTCAAGTTAGAGAGAGAAGATAATGATGCAGTCAAGAATTTAAGAAAATCCAGAATAACTCTTCACGATGAGACTATTGAAAAGTCCATATCATCAAGTAGTAAATTAGATACTTGTTGTACTTCTAGAACCGTGTCAATTAGTGGCGTCAGGGATGGTGATAGAGGAGAGAGTGTGTTCAAGTGTTACAGCTGTCATCAGGAGTTCACTGAAAAGAATAACTGGCAGCAACATATGAATGAATATTACGACTGTAAGGGGTGCTTTCCCAAAAAAGAAAAGATAACCTTTGATGACATTGGAAAAGAAGTTGTTACTGATAAGAAGAAAATGTTTAAATGCAAGACATGTGATAAAGCATATGTTCAAAAATATAATGTCATCAGGCACTACGAAGTGCTGCACAAACCAATGAGCGGACGGTTTGTTCTCGTGACGTGGCGAAAGGGCTCCACATTAAAAAATGTGGTTGAAAAGCCAAGGAACATGAATAAATCAAAACAGGTTACTAATCCTCGCTGTAAGAAGGGGTAG
Protein Sequence: MVKTEDNGAYDSLNLEDSKLNHQSETVGNSISSFNEESICHSSTTDEPVVAHSRNDLHLVTESPLNSHKWDRGSEPSNNISERRWMQNEDWRTHGNRLKDVRVTHVDIIRSKSNISCDVLKKARGFFKRTEYGGNDGMMQHNQNRVNSKTKTEGVDDDIIRNGEGNTMICNMKREGNNDVMVGDVKSTPCCKIKTEDNDDVMLHDEDSTPCCKIKTENNDDVFLHDEDGTPCCKIKTEDNDDVILHDEDGTPCCKIKAEDNDDIIQDDEDGTPCCKIKTEDNDDVMLHYDDGPPFCKIKTEDNDDVMLHYDDGPPCCKIKTEDNDDVMLHDEDSTPCCKIKTEDNDDVMLHYENGTACCKIKTEDNDGIILHDEDDTPCCKIKAECHDAYDSGKNLRKSKLNLENETIENAISSHDITGSICSSRTNEEVTVRRRIRIDNTKSFSYIRADDGTVGFFKCYSCLQEFADENDWQNHMSEYYNYTGCFPKKEKIVLNDIGLEIVSDKGMMFKCKTCDSVFDGKYKLMKHYEVLHRPRQLRCGFCPNKEFVCVMYLLKHFSRVHRPNPMLVYCHYCEFKANNKDNLRNHISGVHFHVKVTCDICRSVLSKDNLRRHMKSVHADVGYPLRCTLCKYRTHHNSYLRQHVRRQHSKKVKVWKCNQCSYETKEGRKAVNDHRLLKHSMVLKNKGDNVMVHDEGSTLDDTVKGEDNDDVMAHDKGKVETEGNDDVMAHYEGNTLNSKVETEGNDDVMVYDEHNTLGCKVKREDNDDVMVNDKGSTLYGKKKRVDNDDVMAHDKGSTLYGKKKRVDNDDVMAHDKDSTLYGKKKRVDNDDVIAHDKGSTLYGKKKRVDNDDFVVHDKGSTLYGKKKRVDNDDVMAHDMGSTLYDKKKRVDNDDVIAHDKGSTLYGKKKRVDNDDFIVHDKGSTLYGKKKRVDNDDVMAHDKDSTLGCKIKREVHDDVLVHDEHSTPYCKIKREYSDNVMEDNEDSPLYRKVKREHTDDVMVHDEYSTVGRKIKREDNDDVMAHDENSTLGDKIKRKDKDDIMKPDKHSTPYCKIKTEDNYAYNSVKNLGKSKLNLDNKAIEKTTSSQNKKGKYSSRTNEEVSVRRRRRIDNTKSFTFIRAEDVSEGFFKCYSCLQEFTEENDWQNHMSEYYNYVGCFPKRAKNFFNDIGLEIVSDNGRMFKCKTCDHLFGQKNSRNDLHQVTESPSSPPECDRGPAPSKKIPQRRIVRRGGWRKNGVKIKDVRVKLVDILKSKSIISYDVIKQAESLFKSKECESNDVMMQHDQNRVNLKTRTVRDDEIVMGHGEGNTMICKTETEDIDDILRDGEVTTMICKTETADIDDILRDGEVNTMICKTETEDNDDVLRDGEVTTMICKIEKEDNDDILRDGEVTTMICKTETADIDDILRDGEVNTMICKTETEDNDDVLRDGQVNTMICTIEREDNDDVMIDGKGNTKVFKLEREHNDDVMIDGIGNTKVFKLERKQNDDVMIDSEGNDMICKLERDQNDDVMIDYENIAMICKIDSEFNDDEIIDGKRNTKVFKLERKHNDDVMIDGKDNTKVFKLEREDNDDVMIDDKCNTKVFKLEREDNDDVMIDDKCNTKVFKLERKHNDDVMIDGKDNTKVFKLEREDNDAVKNLRKSRITLHDETIEKSISSSSKLDTCCTSRTVSISGVRDGDRGESVFKCYSCHQEFTEKNNWQQHMNEYYDCKGCFPKKEKITFDDIGKEVVTDKKKMFKCKTCDKAYVQKYNVIRHYEVLHKPMSGRFVLVTWRKGSTLKNVVEKPRNMNKSKQVTNPRCKKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -