Basic Information

Insect: Hermatobates lingyangjiaoensis
Gene Symbol: -
Assembly: GCA_026182355.1
Location: JAPFBL010000084.1:13483099-13493165[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0057 2.7 10.6 2.4 2 23 543 566 542 566 0.90

2 15 3 1.4e+03 2.0 0.1 2 19 632 649 631 649 0.86

3 15 0.00031 0.15 14.5 0.3 1 23 686 710 686 710 0.98

4 15 0.0086 4 10.0 0.4 2 21 751 770 751 771 0.94

5 15 0.0025 1.2 11.7 2.3 2 23 786 808 785 808 0.97

6 15 0.00098 0.46 13.0 1.9 1 23 833 855 833 855 0.97

7 15 4.7e-06 0.0022 20.3 2.7 2 23 864 885 863 885 0.96

8 15 0.0028 1.3 11.5 0.8 1 20 893 912 893 914 0.94

9 15 0.00086 0.4 13.1 2.8 1 23 922 945 922 945 0.95

10 15 0.00015 0.069 15.6 0.9 3 23 976 996 974 996 0.96

11 15 0.027 13 8.4 3.5 2 23 1057 1078 1057 1078 0.98

12 15 0.21 99 5.6 0.4 2 19 1159 1176 1158 1177 0.84

13 15 4.2 1.9e+03 1.6 10.9 2 23 1191 1213 1190 1213 0.94

14 15 0.0023 1.1 11.8 3.9 1 23 1459 1482 1459 1482 0.98

15 15 0.0023 1.1 11.8 0.8 2 23 1500 1521 1499 1521 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0057	2.7	10.6	2.4	2	23	543	566	542	566	0.90
2	15	3	1.4e+03	2.0	0.1	2	19	632	649	631	649	0.86
3	15	0.00031	0.15	14.5	0.3	1	23	686	710	686	710	0.98
4	15	0.0086	4	10.0	0.4	2	21	751	770	751	771	0.94
5	15	0.0025	1.2	11.7	2.3	2	23	786	808	785	808	0.97
6	15	0.00098	0.46	13.0	1.9	1	23	833	855	833	855	0.97
7	15	4.7e-06	0.0022	20.3	2.7	2	23	864	885	863	885	0.96
8	15	0.0028	1.3	11.5	0.8	1	20	893	912	893	914	0.94
9	15	0.00086	0.4	13.1	2.8	1	23	922	945	922	945	0.95
10	15	0.00015	0.069	15.6	0.9	3	23	976	996	974	996	0.96
11	15	0.027	13	8.4	3.5	2	23	1057	1078	1057	1078	0.98
12	15	0.21	99	5.6	0.4	2	19	1159	1176	1158	1177	0.84
13	15	4.2	1.9e+03	1.6	10.9	2	23	1191	1213	1190	1213	0.94
14	15	0.0023	1.1	11.8	3.9	1	23	1459	1482	1459	1482	0.98
15	15	0.0023	1.1	11.8	0.8	2	23	1500	1521	1499	1521	0.97

Sequence Information

Coding Sequence: ATGCTTTTACGTCACAACTTAAGAAGGGAGAGTCCATACGGTAATCCTGGCAACAGGTACTGCTCTCACATCATTATGAATACACCTCAGAAACTCCTTTTTTCCAATGTATGCATCCTTACCCATGAACTTTTCCTTCACAGTGATGCCGCTACACCCTCGTTTTCCTATGAGCAATTACGTACTGGTTCGCTCTCCTACATAGCTCTCTCAATTCTATCTTGTCTTTCTCTCTCAAATGTAATGAGAGCAGTTCAGAAACTGCTTCTTTACCATAAGGTCCTTCAAGTTTTCAAATGTCTTCCTAGTACTAGAGAACTTAATCCAGTTGCTGAGGAAATAGAAACTGGTTTAAGAGAGAAAGCAATAAAGAAATGTTGGGAGCTAGGTTATATTAATACTGAAAGTGCAAATTCCGCTAAGACCGATTCCATTTACTCTTTAACAAAGAAAGAAGTTGAAAAGAATTTGTTGGCAAGTGAAAGAAGGGCGTGTGCCAAACTCCCTAATGATTTACTTATTGAACCCATCCGAATTGAGTCAACTCATTCTTTGGTGAATGAAAGGACATTGGATCATTCTTCAAAAGGGACACTTTCAGCTGAAACCCTGAATGGTACTGCTGTTGTAGATAATAAAAGGAACGAAGTAAATGAAGTTAATTTTCATGATGAAGAATGTAGCAATGGTAGTACTCATACGGATTTGCCGTTGAATAATTCTTCTAGTTATGTTGAAGGAGTTAATAGAAATGAAACGGTGGGATGTAACGGAATCAATAGTAATTCAGGCTCTATAGGTGATATTAACATAGGTCTCTATGTAATGAATGATGCCGCAAGTGAGCATGTTGATAAGACATGTCCAAAGGATTTTGATAAAGTCCAGGAGGGCCTTGTAGAACGATCATTTGAAAATGATCCTACTGTATCTAGTTCTTCATGTAGTTTAAATTCTACTTTTAAAAATCGTATTATCAAACGTGAAAATGAAACAACTGAAAGTTGTCTTAGTATAGTGACCTATGAGCAAAAGAAAGTTTCAGACAATAGATATATTATTTCCCAAGTTGAAAATGGCAAAGTCAGTTCCCAAACTCCATTCACAAGTTCTTCATTGAATGATTCCAGTCAAACTGATGATTTGTATGTTGTATGCAACAACAAAAATGAAATGCCTCCAAATACTGCTCCAACCATCGAAAATAAATATATAAATGCACCCTCCGATGTAAATAATGTTTCAAGTATGAAATGTATAAGAGAAGTGCCCGCCGCAGTCCTGAATTCTCAGTCGTCAGAGCATTCTAGTGATCTGAATAATAGTTTATTTGCTTATAACGCACAAAATAAGGATCAGTGTGCATCTAAAGCCATTCCTACCACTGTGTTCCCAAGTCCTGTTGGTTTTCTTGAAACTTCAGTCAGGAAAGATGGATTGAGAAACGAGTTTGATAATGTGAGAATCAAGGAAGAGCCTTTGAGTGGATGCGAAGACTCTGGAGACCAAAGTGATAATTCCTTCAACGCTATAATAAAAACTGAAGCCATTGATTATGAAGCCTATAAAAATCCTACAGATGAGATCGCACCTCGTGCACCAGCAAAAAAAAAGGACAAACTTACCGTCTGTGAACTCTGTCAGAAGAAATTTAAATGCCCTAGCAGTTTATTGAAACATCAAAAATCAGAAATTCATCTACGCATATCGTCACTCGTTGCTGAAGGTCGATCAATTAGTAGGCAAATGAGAAAAAGTTGGGTAAAAAAGATAGCAGCTGAAGCGAGAGTGAAAGCTCAAGCTAGTAAGCAAGCTAATACAAACTCTACAAGTACTCGTTCAAGAACTTTAGAAGCGAGATTGCTTCCTGCAATTGATAAAAGTGAACTCCTTGAATGTAAAGTATGTAATATCGTTTTAAAAACTAGAGCTTTAAAAGTAAAACATGATAATTCATTGATTCATTTAAATGCGTTAGAAAATTTAAACAATGAGCAGTCTCCCCCTTCTCAAATTGTCACCTCTTATCATGATAATAGCAGTAATCAGACAACTTACACGTGCCCATTTGCTTCATGCAACATTTCGTTTACAGATGGTGGGCAGTTGATTGTTCATATGCATACCCATGGAATATCTCTCCCTATGAAAGAAGTGGATAATCAGCTTAAACTAAGTCAGGAAAAACAACAACAAGTAAAGTTAACTTATAAACGTGTTAAGTCAGATGTACCAGCTGTTCGTCAAGCTGTATGTCGGAGATGTAATGCAGTGTTCAAAAGCAATGTTTCATTGGCAAATCATTTAAGACATTGTGGTGGTTTGCGCTTAATGAATATGAAACGCAACACAGTGTATTGTAAGATTTGTCAATTACATGTAAAAAACAAACGGAGCCTTGCATATCATATGAAGACGTATCATTGTGAAGGCCTGAGCTCTGGTGCAGTCCAGTCTGTTCAGTCGATTCCGCATAAATTGATTTCTCCCGAAAAATTTTGCTGCCCCAGTTGTCCTAGAAGTTTCAAATCAGTTAAAATGCTGTATGCTCATTCCAGAGTTCATAAGAGAGAGGAAACCAACATTCTTAATTGCAAGTTGTGCAACAAGTCGTTTAATCATCTGAGTACTCTACAGGCACATATAAAAATGCATTTTAGTGTTAAAAAGGGTTATTATATCTGTTTTGAATGTTTTCAAGTTTTTAAAGGAAAGAGTCATTTGGAAGAACACAAGAGTATTTGCACTATGAAAGTAAATACTTTTCCTTGTTCTAATTGCACCCTTACTTTTACTAGTAAGGTGTTATTGAATAACCATAGGCAAGAATGCCATGGATCTGATAGTGACATTCCATATCCCAAAGAAACAAGTAGCGCTAGTAATTTTCCTGTGCAAGCCGATGCACATAACGTGGAAACGTTTTGCGTATATTGCAATCGCAATTATTCAACAATTGGGAATTTATTGAGACATATGAAGTTGCATTCGTCTGATCATAAAGAATCAAAAAAAGAATTTTGCTGTATTGATTGTAACGAGACATTTCCAAATAAGGTTTTGCGTAGCAGTCACAATTGCTTAAAAAAATCAACTGGAAGTGGTGGAACAGCGGAGGGCATTTCATCAGTACCTGTGCAAAAACCATTTGTTGAAAGCTCTTATAACACCTGTCGATACTGCTCTAATAAGTTTATGCAGCGGAAGTATTTAGTCCAGCACTATAGAAAACACTGTAAAAACTTACCAGATTTAACTTGTCATGAATGTGGCGAAATTAAAAAACCTTGGTTAATGTCAGAAAAAGATCCGTGTAGAAAATGTGGCCACTTAGATGATTCGCTTTTGATAACGAAAACTTCAAATACTGCAACTCTTCATAAATGTCCTCTTGGTGAAAGAAGTTTCCTATCCTTGAAATCCATGCTGAACCATTCTTCTGTATGCAATGGTGATTGTAAAGATCAGTCAGTATACTGTAAAGTGTGTCATAAATCTTATCCTTCTCCTACAGTGTATTTAGAGCATAAACCTTGCAGAAAAGTTGTTACTAATAAAAAAGGCAGTTGTAAATGCCACATTTGCTTTAAAATTTTTAAAAATATTAATTCTAGGAGTCATCACCTGAGGCACCAACATAAAATGTATTCTTCAAAGGAGCTTATCCCTCAACAATCGACGGAATTAAATGAGACGGTTAAATCAAGTCTACCGGCTAAAACTTATATTTGCCAAGGTTGTTTGTTACCTTTTAGTTCACAAGAAGCTCATGATCATCATTTTTCTTATTTTCATAAGAACAAGTTAAGTGAACATCAGTGTGCGTTTTGTGGATTAAAGATTCTACGAAGAGAACTGTATGAGCATGGATATGAGTGCATTAAAAGTCAACTAGTCAATATCTCGGTCCTGGAATGTATTGGTTGTAAAACTGAATTTAATTCGCAAGATGAAGATGACACAATATCATTTAAATTGCAAGAACACATTCTAAATTGTGCTGGTAGGTTACCCTATAAAAAAGGTGAAACATTCAAAAACAAAGAGAAACATTTATGCCTTAAGTGTTGCATGATGTGCCCATCTAAACAGTCTCTACTGTCTCACATGAAAAAGCGGCATGGCATTGTAATATTGTCAGCCAAAAGTTCGAAAATTCATGATATTAGAAATAATTACCAACCTGAGTTACCTCCTATTGAACCTAATAGCCAAAATGATATATTTGCTCCTGAAAATATGGCTCCTTCCTCTACTAGTTATTACCCTAATGAATTTTTTGGTAGTGAAGAAAATATAGAATTTTCTCAACCTCAAGAGGAGATCATTTCTACTCCTGATCTTCCGTTGCCATTTGGACCAGAACAGCAATTCTATAAGTGTTCCCAGTGTTCCAAATCGTTTAAACTATACAAAAGTTATGCAATCCATAAGAGAAGATCCCATCCATTTTCTGGGAAGAAAAGGAAAGTTGCATCAAGAAAATCTGATGCTCTGAAATGTAAAATTTGTCAGAGACAATTTTATTCCGAACCTAAGTTATTGAACCATGAAAAAGTTCATGGCATTGTAAAAAATATATTTTGTGACGGTCCTCAAGAAACTGTAACACCGGCTGAATCTTTAAAACAATTCGAGCAAGACAGCATCAATCTCAATTAG
Protein Sequence: MLLRHNLRRESPYGNPGNRYCSHIIMNTPQKLLFSNVCILTHELFLHSDAATPSFSYEQLRTGSLSYIALSILSCLSLSNVMRAVQKLLLYHKVLQVFKCLPSTRELNPVAEEIETGLREKAIKKCWELGYINTESANSAKTDSIYSLTKKEVEKNLLASERRACAKLPNDLLIEPIRIESTHSLVNERTLDHSSKGTLSAETLNGTAVVDNKRNEVNEVNFHDEECSNGSTHTDLPLNNSSSYVEGVNRNETVGCNGINSNSGSIGDINIGLYVMNDAASEHVDKTCPKDFDKVQEGLVERSFENDPTVSSSSCSLNSTFKNRIIKRENETTESCLSIVTYEQKKVSDNRYIISQVENGKVSSQTPFTSSSLNDSSQTDDLYVVCNNKNEMPPNTAPTIENKYINAPSDVNNVSSMKCIREVPAAVLNSQSSEHSSDLNNSLFAYNAQNKDQCASKAIPTTVFPSPVGFLETSVRKDGLRNEFDNVRIKEEPLSGCEDSGDQSDNSFNAIIKTEAIDYEAYKNPTDEIAPRAPAKKKDKLTVCELCQKKFKCPSSLLKHQKSEIHLRISSLVAEGRSISRQMRKSWVKKIAAEARVKAQASKQANTNSTSTRSRTLEARLLPAIDKSELLECKVCNIVLKTRALKVKHDNSLIHLNALENLNNEQSPPSQIVTSYHDNSSNQTTYTCPFASCNISFTDGGQLIVHMHTHGISLPMKEVDNQLKLSQEKQQQVKLTYKRVKSDVPAVRQAVCRRCNAVFKSNVSLANHLRHCGGLRLMNMKRNTVYCKICQLHVKNKRSLAYHMKTYHCEGLSSGAVQSVQSIPHKLISPEKFCCPSCPRSFKSVKMLYAHSRVHKREETNILNCKLCNKSFNHLSTLQAHIKMHFSVKKGYYICFECFQVFKGKSHLEEHKSICTMKVNTFPCSNCTLTFTSKVLLNNHRQECHGSDSDIPYPKETSSASNFPVQADAHNVETFCVYCNRNYSTIGNLLRHMKLHSSDHKESKKEFCCIDCNETFPNKVLRSSHNCLKKSTGSGGTAEGISSVPVQKPFVESSYNTCRYCSNKFMQRKYLVQHYRKHCKNLPDLTCHECGEIKKPWLMSEKDPCRKCGHLDDSLLITKTSNTATLHKCPLGERSFLSLKSMLNHSSVCNGDCKDQSVYCKVCHKSYPSPTVYLEHKPCRKVVTNKKGSCKCHICFKIFKNINSRSHHLRHQHKMYSSKELIPQQSTELNETVKSSLPAKTYICQGCLLPFSSQEAHDHHFSYFHKNKLSEHQCAFCGLKILRRELYEHGYECIKSQLVNISVLECIGCKTEFNSQDEDDTISFKLQEHILNCAGRLPYKKGETFKNKEKHLCLKCCMMCPSKQSLLSHMKKRHGIVILSAKSSKIHDIRNNYQPELPPIEPNSQNDIFAPENMAPSSTSYYPNEFFGSEENIEFSQPQEEIISTPDLPLPFGPEQQFYKCSQCSKSFKLYKSYAIHKRRSHPFSGKKRKVASRKSDALKCKICQRQFYSEPKLLNHEKVHGIVKNIFCDGPQETVTPAESLKQFEQDSINLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -