Hlin070870.1
Basic Information
- Gene Symbol
- F54F2.9_1
- Assembly
- GCA_026182355.1
- Location
- JAPFBL010000547.1:111221-118101[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00095 3.6 9.7 0.0 2 30 29 61 28 74 0.83 2 2 1e-08 4e-05 25.6 0.0 3 43 118 163 117 165 0.91
Sequence Information
- Coding Sequence
- ATGCCTTCCGTCTATTGTCCAGAATATGCAAATAGCGTAACCTTGTCCACTCTCGCGGTTACGCCAGCTCCAGTTATCAAAGGAGGCTTATGGACTGATAATGACTTTGAAGACCTCATTAGATTAATGAAGAAATACCCCGCTGGTACTCAAGACCGGTGGGATAAAATTGGTGAATCCATGATGAGAGCTGCTGGTGAAGTAGCTCATATGGCTCACAAAATCAAAGGAGAAGGTTTCAACCCGTTCAAACAACCAGAAGAAGTAGATCCTGTTCCTGCAGTACCAAAGAAAGTGAAGACTCGAGGAGGTAAAGGAGGAGAAGAGAATAATAGTGGGGGAGGCGATGCCTCCTGGAGTCAAGCACAGCAGAAAGCTCTTGAAACAGCCTTAGCTAAATTCCCGAAAGGTTGTTCAGGAGATAGATGGGAGAAGATTACTGCTTGTGTTCCAGGCAAAACAAAGGACGAATGTTTACAAAGGTTCAAATACTTAGCCAATATAGTTAAAAAGAAGAAGGAGTTTCCTGCCGGTGAAGACAAAGAACCAACGTCTTCCAACCTGGAGACCCAGTACTCACAAGACTCATGA
- Protein Sequence
- MPSVYCPEYANSVTLSTLAVTPAPVIKGGLWTDNDFEDLIRLMKKYPAGTQDRWDKIGESMMRAAGEVAHMAHKIKGEGFNPFKQPEEVDPVPAVPKKVKTRGGKGGEENNSGGGDASWSQAQQKALETALAKFPKGCSGDRWEKITACVPGKTKDECLQRFKYLANIVKKKKEFPAGEDKEPTSSNLETQYSQDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -