Hlin038199.1
Basic Information
- Gene Symbol
- -
- Assembly
- GCA_026182355.1
- Location
- JAPFBL010000156.1:704005-706398[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.0025 9.7 8.3 0.0 22 43 280 303 267 306 0.89 2 5 0.0039 15 7.8 0.0 3 35 314 348 312 350 0.93 3 5 2.1e-07 0.00081 21.4 0.1 2 45 367 414 366 415 0.94 4 5 0.016 63 5.7 0.0 1 42 420 461 420 465 0.87 5 5 7.6e-14 2.9e-10 42.0 0.2 2 44 472 514 471 516 0.96
Sequence Information
- Coding Sequence
- ATGGAATCAAATAAGAAGGCAGCTAAGGCTGATAAATACCTGCAAGATCTAATTGCAGACAATAAAATTGTTGGTGAAATTTACTCTAGTGATGAAGATATTAATTTTGAGTTGGATGGAGATGATCTTGACGATGATTTGGATGAAATCATGTTCAAGGAACAAATTAAGGAAGCAGAATCATTTTTTCGTGAAATAACAGAAGATGTTAGTAATGATGCTTATGATGAAACACTAGAGGAAGTAAATGAGAGTTACATTTTAGATGACTTTGATGGTACCACGATGTCCACAGAAGATTTACTTGTAAATTTGCAGGACGCAATGGATGTAAACACAAAAATGAGGGATCAGTTATTAAATTTAGAAACATCTTTGGTTAGTAAAAGGCAAGCAATTTTAGATAAAATTAATGAATTAAAAAACAAGAGTAGTTCTAATGAATTATCAGATCTTCTAGGATGTAGAGATGTTATTACTTCAGGTTCTCCAAATTATTTTGGCGCTAATAATAATATTGCAGTTCAGAAACATGTTCATTCTTTTTATAATCTGTTTAAATATCCGTACTTTAAAGATAAAGATAATTACCCTTGTCCCTTGTACTATAACGCCATATATGGGCCTTGTAAAACAGTTTATAAGCTTTTAGATTCAAATTGCAAAGCTTGGACGAAATATGGAATACGCCAGTTTGAACTGGTAATAAAGAGATTCTTAGTTGATGATTTTCGAAGTAAACCAGATTTTAAGTCCTTTTATAAGTGGAAGAACTATGCGTCATTCGTAAAGAATAACACTTTTGCAGACATTTTCAAGGAAAATGAGGTAAAATTTGATTGGTTAAAAATATCTAAAATGCTTTCGGATCAAAATAGATCAGCATCAGAGTGTGAGAAACTTTGGAACTTATTTTTAAACCCTAAATATTTACAGGATACTTGGAGTGATGTTGAAAATAGAATGCTTTATTCAGTAACTAAAGTTTATGATGAACAGAATTGGGATTTGATAGTCCAAGGAATGGGCACGAATAGATCTGTTTTCCAAGCTTTTTGGCAATATGCTAGTAAGCATGCTTCAAAGAAACCTGTTTCAGGTAAATGGACCCGTGAGGATGATGAAAAGTTAAGTGGGATTATTAGTAAATGCACTTATGGAGATTATATATCTTGGAGAAAAATTATGTATTATTTTGAAAATAGGTCTTATAGGCAAGTTTATAGTCATTATATGAACAATATGACACCTATGAAGAAAGGTAGATTCTCAGTTAAGGAAGATACAACCATACTTACTGCAGTTCATCACGGTTTAGGTTTAAGAGAAACATCGGAAGTATTAGGCAAAAAAAGGAACAGATTACAAATAAAGAACAGGCTTTCAGGGCTTCTAAGTTTAAATAAAAATGTGGGCGAATGGTCTTATGAGGAGGATAGACAGCTTTTCGCATTAGTGGATAAATTTGGAAAACATTGGTCAAAAATCGCCAAAGAATTAGCTTCAAGGGATAGATTCCAAGTCCGGCATAGGTATTTGAGGCTTGAGCGAAAAATGAAAAATGATAATGATTTCGATATAGAAAAACTTGATCGATCAAAAACCTTCATTGCCAAAAGAGTAAAAGCTAAACATAAAAAATTGATACGAGTGATAAATGAAAAAGGTAAATTTGGGAATTTATCGATAAATTCACTCAATCTCAGTGGAAAAAAAAGATTGGCAGAGGATAGTGATGATGGTGACTCTTCACTCAAAATATTAAGGTATCAAGAATCTACAGAAAAGCAAACGAACAAAAGATTTGTTGAGTATCTAATGGACCAGGGTTCTGGATTTTGGTTTCCACCTATTAAAGTAAGAGTATGTGATACAGATACTATTAAGCTGACAACAGCATTTTGTAAAGCTTTGAAAGCCAATTTTTCAGTTAAGATTGATTCTGATAAATTTTCTAAAGATGAATTATTGGCTTCTGTTAGAAATATTTATAGGCAAGTGCAAAACAATGAAATGTTACTAAATCCTGCTTCATATTCATCAAAGGAATCGGATAAGTATTCTAGATTATCCTCAACTTCTAGAAGCAATTTCTATACTCTGCCTCCAAATGCGTACACTTGTACTGCTTTCTTTGGCCTTATGTGTTTTTATAATGACATTAAAAATAGAAAGGGGTTAGTCAATATTTATTCCCGAAATGAAAACTATAAATTCCTGGAAGCTAAGCACCGTTGCAAGGAACGATTAATGAAAATGTTTTTGTGGCCTGCTCTACTTTCGAATAAAGAAAGAAAACATTTATTACCTTCTCAATTGCTGTCAAATAATAAAGGTGATGGAAGACATCAGTCCCAGGTTCCTCTCCCGGAGTCATCCAGTAGAACTTCTTAA
- Protein Sequence
- MESNKKAAKADKYLQDLIADNKIVGEIYSSDEDINFELDGDDLDDDLDEIMFKEQIKEAESFFREITEDVSNDAYDETLEEVNESYILDDFDGTTMSTEDLLVNLQDAMDVNTKMRDQLLNLETSLVSKRQAILDKINELKNKSSSNELSDLLGCRDVITSGSPNYFGANNNIAVQKHVHSFYNLFKYPYFKDKDNYPCPLYYNAIYGPCKTVYKLLDSNCKAWTKYGIRQFELVIKRFLVDDFRSKPDFKSFYKWKNYASFVKNNTFADIFKENEVKFDWLKISKMLSDQNRSASECEKLWNLFLNPKYLQDTWSDVENRMLYSVTKVYDEQNWDLIVQGMGTNRSVFQAFWQYASKHASKKPVSGKWTREDDEKLSGIISKCTYGDYISWRKIMYYFENRSYRQVYSHYMNNMTPMKKGRFSVKEDTTILTAVHHGLGLRETSEVLGKKRNRLQIKNRLSGLLSLNKNVGEWSYEEDRQLFALVDKFGKHWSKIAKELASRDRFQVRHRYLRLERKMKNDNDFDIEKLDRSKTFIAKRVKAKHKKLIRVINEKGKFGNLSINSLNLSGKKRLAEDSDDGDSSLKILRYQESTEKQTNKRFVEYLMDQGSGFWFPPIKVRVCDTDTIKLTTAFCKALKANFSVKIDSDKFSKDELLASVRNIYRQVQNNEMLLNPASYSSKESDKYSRLSSTSRSNFYTLPPNAYTCTAFFGLMCFYNDIKNRKGLVNIYSRNENYKFLEAKHRCKERLMKMFLWPALLSNKERKHLLPSQLLSNNKGDGRHQSQVPLPESSSRTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -