Hlin057704.1
Basic Information
- Gene Symbol
- Mblk-1
- Assembly
- GCA_026182355.1
- Location
- JAPFBL010000051.1:1528106-1536577[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-17 5e-13 50.5 0.0 1 39 124 163 124 167 0.95 2 2 2.2e-19 3.2e-15 57.5 0.0 1 43 320 363 320 365 0.95
Sequence Information
- Coding Sequence
- ATGCTAGCATCTGTTCCAACATGGCCGGCTAGACCAAATCGCCTTCCATATTTCCATTATCGCAAACCAATTCTCCTAGCTTTCACACTAGCACGAATAGTGCTAGGTGGCACAGTCTGGGAAGGAGACTGCAGCAGCTCGGGTTCAAGCAGCCCCAGCATGATTTCCTCTCTTCTTATGGCTCCCCAGTGGTATCTGCGGCCGGACTCTCCGCCCGACCAACCACTTGACTTGTCTGCCAAGGCGAAGCCGGGACAGTCACCGGGGCCAAGTTCCCAGCCTTCTCCACCCATCAAGTTGCCTGCCCTTCCCAAACACATATTTAAGGCAAAACCACGATTGACTGCAGTAACGGGGAGGAAGGCATACACTGAAGATGAACTCCAGGCAGCCCTAAGGGACATACAAAGTGGCAGGCTGGGTACTCGGAGAGCGGCTGTCATTTATGGCATTCCTAGGTCAACCCTAAGAAATAAAGTGTATAAAATGAGTCAAGAAAGAAGAGATGCTCCAAAAGAAGAGGATGAAGAAGAGGAGGAAATGTCACCAGATGATGAAGAGAAAGAAATGGAGAAAGTTTTAAGAAAGCAATTGCGGAGTTTGGAAGATGTAATGAGACTGACTCAAGGACGTCCTCAAGAAGCGATTCCTTATTTACAGCAAATGCTGCAAGGGCAGGATAAAGATATTCCTGAGGCTGTGCGAAATTTGTTCGCAGAGGACCGGCAAGCCAAACACAATGGAGAGGACAGACTGAAGTCTCTGAGTACTTCACCACCATCGTCGCCTCCGAAACAGAGACTAGCAACAGCTTCACAGACCCTGTTATCTCAACAAGTGAGAAACATAAATAATAATCACATAGACGACAAGAAGTTAGAACAACAAGGTACGAGTAAGCAGCAGCAAACGACTGGTAAAGGGACGCGCCCTAAAAGAGGAAAGTATAGAAACTACGACAGAGATAGTTTAGTGGAGGCTGTTCGGGCGGTACAACGAGGCGAGATGAGTGTTCACCGGGCGGGCTCTTACTACGGAGTGCCGCACTCCACGCTAGAGTATAAAGTGAAAGAGCGTCATTTAATGAGGCCTCGCAAGAGAGAGCCGAAATTACAGAATTCAATCCAAGAGGAAGTGAAAAGAAAGGAGGAAGCTGAGAAAAGAGCTGCAACAACAGTAAGACCTCCTAGAGTCCCTTTCAGCGGTCCTGTCCCTCCCAGCAATGGGCTCAAGCTAGGCCTCTTCGACCCTTCAGCTCTGGCCACCTACCCTGGAGCACCTCCCTTTCCCTTTTGGCCTGGTCACCCTTTTACTTCCCTCCCTCTTACCGACTTCCCCAGACCACCAGATATATTTCCCTCGCAGATGATTCAAAGGCTGCAAGAAGAACAAGCAGCCTCTACATCAGCCCTTGGGAAAACAACCCGCGAAGTAGCAGAATCCCTTTACGATGGTACAGGTGAAAATGGATCTTTTCTCGATGGTATCATCAGATCGAGTCTAGAGACAGGACTCCCTTCAAAAGAAGGATCAAAAGGTGGTTTAATAGAGCAGCTGTGCCGTGGATCAGAGCTATCAACGCCCAAGGCAAACTCGACCGAGTCTTGTTCGCCTCCGCACAAAGCGTCCCCTCCGCCCAGTCCAAGTTCCTGTGATACGTCCCCAAAAGAAACCTGA
- Protein Sequence
- MLASVPTWPARPNRLPYFHYRKPILLAFTLARIVLGGTVWEGDCSSSGSSSPSMISSLLMAPQWYLRPDSPPDQPLDLSAKAKPGQSPGPSSQPSPPIKLPALPKHIFKAKPRLTAVTGRKAYTEDELQAALRDIQSGRLGTRRAAVIYGIPRSTLRNKVYKMSQERRDAPKEEDEEEEEMSPDDEEKEMEKVLRKQLRSLEDVMRLTQGRPQEAIPYLQQMLQGQDKDIPEAVRNLFAEDRQAKHNGEDRLKSLSTSPPSSPPKQRLATASQTLLSQQVRNINNNHIDDKKLEQQGTSKQQQTTGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKLQNSIQEEVKRKEEAEKRAATTVRPPRVPFSGPVPPSNGLKLGLFDPSALATYPGAPPFPFWPGHPFTSLPLTDFPRPPDIFPSQMIQRLQEEQAASTSALGKTTREVAESLYDGTGENGSFLDGIIRSSLETGLPSKEGSKGGLIEQLCRGSELSTPKANSTESCSPPHKASPPPSPSSCDTSPKET
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -