Basic Information

Gene Symbol
jarid2b
Assembly
GCA_026182355.1
Location
JAPFBL010000015.1:694459-734711[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.1e-22 1.9e-18 68.6 0.0 4 89 2021 2104 2018 2104 0.93

Sequence Information

Coding Sequence
ATGGCTGTTTTTAAGAGTGATATTAAAAGAAGATGTAAAGATGGTCATAACACTATGGAGAGTGTTCCCAAAAGGGCCAAGGTTCATGCTCAGAGAAAGTTTGCCCAAGGACTCGGAGCAGGATGTTCAATGGTTCCAATAAAAGAGAAAGAAAAAACTAAATCCAATGGGTGTTCTGAACCTTGTGATATTTCTCCAGCAGACCGACCTAAAACGGAGGATTTTTTAACCTTTCTCTGCTTTAGAGGGACATCAGCACTTCCTTCAAGGTTAGATTTCTTCAACGTTGCTTCAGTGTCAGATGGTGTAGCTACTTCATCCCAAATGACAAGAACTGGTAAGATATCTTTCAGCATCACTTTCTGTCTGTCTTATCCTGATGGTCAGCCACCGTTCAAAATAGAAAGCTATAGTATAGTGTCTTGCGCAGTTATCTCCAGGGAAATGGCAAGGATGCGAAAGAGAAAGCAAAAGTTAAAAGTAGTGAAGCATTCAGCAGTTAAAATACATCCTAACAAGTACAAAGATAATCGATCCAAGGTGAACAAAAGTGTGTCCAGGATATTCAGAAAAGATGGGAGGAAAGAGGCTGGTCGACGAGGTGGAAGTTTAGTAGTGAAAACTAGTAGGTTAAAGAGACGTAAACAAAGCATGGTGTTAGCCAGCAAACGTCCTCAGAGAGCCTCTGCTAGCAACTCTCTCAAGCACCGCAGGAGAGTTGAGAAAAGGACACCAAGCGCACTTGTGAAGCGACGGTTAGAGACCAACAGTGTTGTCGCACGCGTGCCCGATTCAATTAGGAAATCAGCTAGACCTTTGGGCTACAGTAGTGATTCAGATGGTGATGAAAATGAAGATGATGAAGAAGAAGAGGGTGAGGAAGAAGGGAATAACGATAAAAATACCAATAATACGATAAGAACTAGAACAAGATCAAGTTCTCTGAAGACCCATGTTAGCCCTGCTCCTAGCTTAAAAAAAATGCCGAGTAGAAAGACTAAGGAGGCTGCTCATGTTTACATGGAAATAATTACTAAGGACTTACGAAGTCCAGACGAGGTGGATGATGAGGTAGACAATGACCAAGCGGGCGCTGAAGATAAAAAGGGTGTCTCTTCAGATTCTGAGCCGTTGGATGTGAAAAAAAAGAAACAAGAAACCAAGAAAAGAAGAGTTAACTTGAGAAGTAATCAAAATAAAACGAAAAATAGTTTACGTGACAAAAGTTTAAAGCGAGATACTCCGGCTAAAAACTTGAGGGTACAGTCAAGACTGAGAAAGAGATCAGTAAGTAGAGTTGAATTGAAAGAGGAAGCAAAAGTGACCAGTAGTACTGATAATGGTAACTCTAGAAAAGTTTTGAGAAGAACGAGGGGAAGAAATGTTCGGAAAATTGTAAAGGAGGAAGAAAGCAATGAAGAAACGAATGAGAGTGAAGAAGAATCAGATTCTGAAAGTGATTCTGGTGAGAAACAGGAACTAAGTCCGAAAAAATCAAAAAGATTGGGAAATAGAATGAAACAGAGGAATTTTGAAAAAGGATCGTATGAAAAGGATGATTCTAATAGAAGAAGTTTAAGATCAATGGCACAAGACAAAGGTAATAAAGGAGTTAGAGAAACTCGTGAAGATTCAACCAAAGATGAAGAAAGTATTAAACCGGAAAAGAAAAAACCTATTTCTAAGTCGAAAGAAGTAAAGGAAAACACGAAAATGAATGTATCTTTGAAGGAAAATAGTGTGAAAAATTCTGTAGATATATCTTCTAAGACTAAATCTGTGACGAAAATAGTGAAGGAAAACGAGAATGTAAGTAAAGATTCAACGATGAAGGAATCTGCTAAGTCAAGGAGAACAAGGAGGAAGGGAGTTGATGTGAAAAAAGAAGTTAAAACAACAGACCAAAACAGCGGACGATCGACAAGATTATCTCAACAAAAAAATACAGGAAACAAGGTAAAAGAATCTGCAAACAGTTCAAAAACAGAAGATAAAGAAATAAAGAAGGCGGATATATCACCTGTTCGTACTAAATCTAATATGAGAAAAACCATCGAAGAAATAGTTCCAGATACAACAGAAAAATTAAACACCAACAAAACTACAAATGACAAGGTAAAAGAAGTAGCACTTGAAAAAAATGATGAGTCAAGTTCGATTAAGGCAGAGTGTGATGAAAAGAATGTTTCAAATGAAAAGAAAGATATCTCAAAGAAAACTAAGGAAAATAAGAATATACAGGAAAATAATTCATTGAAATCAGAATCTGTACTGAAACGGACCACTTCAACGGCTAGTGAGTCTAATAAGGTAAAGAAACCAAAGTATTCGGTGAAACAGGAAACAGCATCAGAGTCCAAGAAAGATGTTATAAAGGAGAAAGACGATGAAGTTGATTCTCATGAAATATTGAAGGTCAGCGAGAAGAAGCCACAGTCGCTAATAGAGACGTCTGAACGTAGGAGAACGAGGAGCTCTTCATTGACTAAAGTGGATAGCGAATCTAAAGATTTGAATGAAAACACAAAACCAAAACCTGAAGGTATTAGGTCGAGGAAAAGTTCATTCCTGTCTGAACAAAATAAAACTAATCTTAATACAGGAGATGCTAAACTTGAAAATAAGTTAGTAGAGGAGAAGATTTTAGAGAAGGATCCTGAGGATATTCCTTTGAGCAGAAGGTCCAGTGTGTCAAGTATACTAAGCAGCACTGAAACAGTCATTTCTAACTGTAAAGTGATGTTTGAAAATTTAGACTTGCAACCCTCTACAATTAAAAGTGAGGGAGTTTTTAAGAAGAAAATACTTCCCGTAAGTCGTGCTAGTGATATTCCTTTTATTTCTAGAGTAGAAGTTCCAAAAAAAGGGAAAAGTTTGAATAAAACTAGGAGGAAGGTTGCTAAATATTCTGATGATAGTACTGATTCTGAAGGAGATTTAAAATTAAGTAGAAAGGAGGCCAGATTAAGACGTTCAGCGAAAGGTCGGGATGGAGTTTTAGGTCGACCTAAGAGAGATTTGACTTATACAAATCAACCAGTCAAGAGAATGCCGCGAGCGAGAAGTGCAAAACATTCAAGTTCTAGTTTCTATTATGAAACTGATTCTTCTAGTCATTTTTCAAGCTCTGAAGAAGATATAAAAATTGTAAAGGAGCCAACTAAAACAAACAGAGATAAATCAGTTAGTGGGAGCTTAACTTCTACAGATAAATGTAAAACAAATATTCAAAAAGTTATAAAGCAGCCTGAAATTGTTGAGGCAGCAAAAATCAAAGAGAAAAGTAAAGATGATTTCGTTAAAAGTGATACAGTAAATAATTCTGACGAAGTTATTAATGTTTTAAATTCAAATTCTAGAGAATCTCCAAATAAAGATGGATTGAAGAAGTTATCACATGGAATAAAAGTAGAAAAAAATGTGCATTTAAATCAATCAAAGGAAAATACAAAAAGTGAGTTAACGTTAGATAAAAAAGAATTGAAGTTAAAATCTGGTGACATATCTCCAGTAAAGAAGGATTTTGAAATGCCTGAAGATTTGATGGATATTAATATCGATTTTGACCATAAATCTTTATTAACGGATGAACAACGAAAAGATATTGTGAATATGTGTGTCTCGGAGCCTCTTGAAATATTGTCTGAAGTGTCCAGTAGAATTACTGAGTTGGCTTCGATGAAAATGGAAGCTGTAAGGCAAAAAAATGAAAGTAGGAAACAAGCAGTAGCTCCTGTTTGTTCTCCATTAGAAGTGAAAATTAAAGTAGAAACAGAAAAACAGGTCGAAGTTAAGGCCCCTGCATTTGAAACTAAAACTTCTAATGATGTGAAAGTCAAAGAAAATTTACCTAATAAACCAGAATCGAAATTAAAACCATCTATAAGTGAAACATGGAGACAGGCGTTTAAAAATGCTAAAATTCCTAAACCTGGTCAGTTAACTCCAATTTCTCATAGCGTTAAACCTTTTGTTCGGAAACCGTTTACAAATCAAGCTATGATTGGTAAATCATTGCCTCCTAGAAGTGAAAATTCTGAAAAGAAGTTTAAAGCTCATGAACATTCACAATTTAAATCTTTAGCGCAAAAGAATGATATAGAAAGTGGTGAAAAAATGACAAATACTCTTTTGAGGGCTGTTAAACCAATAACTTCTGTTAGTCCTAATCAGCAAACTAAAGAAGGTGGGAAAAGTAGTCCTTTTAATGAATTTCATCAAGGTGTAAATAATTTGACAGTTCCTGGAGTAAAACCTGTGGAAAAAACTATTTCATCACCTGCTGCTGGTCAAGATGATGTAAAAGTCTCAAAAGTAGATGGTGGTTCTGAAAAATTGGAAACTTCTGCTAATGAAAATATTAATTTAAACCAAAGAGACAGGAGTTTAATGGGGGATAAGAAGTCAGCTGAAGGTAAACATCATAATTTGCCAATGGCTGTTGAGCATACCTTGAGGAAAATGTCTCCAGTCACCGTGAGTAAGAAGCCAACAGCTTCAAAACCTCTTCAAGTTATACCTACAGATTCTGAAGGAATCATAAAAAGTAGTAAGAGTAGTCCTTCTTCCAGTTCTAGGTCGAGTTGGCTTTGGAAACCAGAAAAGCTTTTATCAGATTCACCAGGAAAACCCTGTGATTTTGATATTTTGGCTAAGAAAAAAGTAAATATGACTGCTGAAGAAATTACTAAGTGGTTAAATGATAGTACAAGTGCAGGAATAGAACATGCTAAAGATTGTGGATTATTTGAGAGGAATCAGTGTGAATGTGGATTTAGGACTGGTGAAGCGAGTATGAAAAGCAGTTTAGTAAGCTCGCTTGTCGATTTAAAGGTGGGTCACAGTATTGTTGAGCCCCCTATTCAGCTAAAAGACTTAGATCCTAAGTGTACTGGAGAAACGATTTCTTCCTGTAAAGTCGAAGACTATAAAGAGAAAATGTACATGAAATCAAATGAGCAAAAATCTCCTCCTAAGAAAGAAGCGGCTTCGAACACAAAAATGAAACAAGGTGCTAAAGGTGAAAAGGCATGGAAGAGCACTCGGTCTATGACTGAAGAGGAAATGTGTGAATTTGATTTTAGATTTGAAAGAAATTCATCTAGTACAAGAGATTCTGGCTCCGAAATGTCATCCCCTACTCCTAAAGATGAAGTAAGTTCAAATGATGAGAGTGGAATGGAGAAAAAATCAATATTTCAGAAAAAAATCAAACGACCTTTGTCACAAAGTCCTTGTGCTTTTAACGCTGAAAACGAATCAAGCGTATATGCCTTTGAACCTGATCTTCCTGAAGTAAACAAACCTTTTAGAAGAAGAAGTAAAAGTAAGAGTGAAGAAGGTGATAGTGGCAGTGCTTCAATTGCAGTGCAAGTTAATATTGATCAGGAAACAGTACTCGAATGTTCTACTCAAACAGACCGAGAGGAACAGGGTGGTCCAACTTTTTTCCTTCCTTTAAAAGGTCAGCAAAATGAGCAAGTCATTCAAGGTGTGACTGTCAAGCTGGATGCTGATGGAGACGGAGATGAACACAGAGTCATCATGAGAGCAAAAATCGTCACGAAACCCACACCTACATTCCCTTGTGCAGGGTCCAAGGGATCACGAAAACCTGAGCAAAAAGTTCGACCATTACCCACTGCACCTGGTTCATCTTCAAAGGCACCTGTAGGAGCAGTTCAGCCAACTGTGCGAGCTGAAACCAGCAACCAAAGCACTCAGTCCTCAAACACAAAACTACCTACTGACTCAAAGGCAACCTCTCCTCTTCATGCTTCTGACAGTGTTGGAAAAGGTGAGAAGAATAGTTCAATTTCGGAAGGTGGAAAAGTGAGCCAACAACTGAAAGAAGCCCCATCATTCTATCCTACTGAAAAAGAATTCCAAGACCCACTGGAGTACATAGAAAAAATCACCCCAGAAGCAGAGAAATTTGGTATATGTCGTATAGTGCCTCCTTCAAACTTTAAGCCTGATTGCAAAGTCAGTGATGACATGAGGTTTACGGCTTACAATCAATATATTCACAAGATGTTGCAACGATGGGGTCCAAATGTCCAGGAAATGTCTGCTATCAAGAAATACCTGGCTACGCAGAGTATAACCCTTAACCAACCACCATGGATTGGAGGTATGGAAGTAGACTTGCCTCGACTCTACCAAACAGTTCAGCAATGTGGTGGCCTCAAAGAAGTGATTGAGAAGAAGCGTTGGACTCGTGTCGCTGACCTAATGAAAATTCCAAAATCTGCCCAGGATAGGGTTACTAAATTAGACGATATCTACTGTAAATACCTTCTGCCCTATGACACACTCTCTCATGAGGAGAGAAGCAAACTATTGGATGAGGTGGAAGCAGAATGGAAGGAACGTCAAAGGAAAAGTCTTGCTTTGTCTTCTAGCCCTACACAGAATTCCTCTGATGAAGATGAGAGTGATTCTTCTGATGATGGCCTCGATGAATGCATCATTAAGGGCCGAAGTATGGCACTAAATGGATTCTACAGAATAGCTAGGAATACGATGTGGATGTGGTTTGGCGATTCCAATCCCAGTGCCGGCGATGTTGAGGGCGAGTACTGGAAACACGTAACTAACAGGACTTGTCATGTTTGTGTACATTCGGGTTCAATTGATTCTGGTACCTGGGGTTACGGTTTTCCAACTACCAAAACAAGTGCTACCTCAAAACATCCCTGGAACCTCAAGGTACTCACAAACAACCCTGGTTCCATCCTTAGATACATTGGACCACTCATGGGTGTAACAGTGCCCACGCTTCACGTAGGAATGTTGTTTTCGACATTTTGCTGGTATCGAGATCCTCACGGTCTTCCCTGGATTGAATACCTTCATACAGGTGCTAGTAAAATTTGGTATGGCGTAGCAGATGACTGCAGAGCACAGTTACAAGCAGCCATTGCTTCACTACTACCCCAGATAGTGCGTGATAGCCCTGTCTGGTTACCCTCAGATACGGCTATGGTCCCTCCGGACCTTCTCCTTGAGAAAGGTGTCTCTCTCTGTCGTGTCGTTCAAGAACCAGGCCACTTCATTCTTGTCTTCCCCAAGGCTTACACCTCAGCTATTTGCACTGGCTATCTGGTCTCAGAAAGCGTTTACTTCGCACAGTCCAATTGGCTCTCTTCTGCTGATAACACCTTCCAGGCGACTAGAGAAAGTTGTGAACCCACAATGTTTTCTTTAGATAAACTTCTCTTCTCCGTTGCTAGTGATACTCGAACTCCTCTTGAAGTATTAACACAGGTGGAACCGATGGTAGAAAAAGTTCGTAGTCGGGAGGTAAGTGAAAGAAAGGAACTGAGGAAGTTGGGTTTGAACTGCTCTGAGAGGCTGCCGAAGCCACCGAGACGGCATTCGAGGCCTGATGACCAGGAGCAGTATGAATGCAGCCAATGTCGTGCCTCCCTCTTTGTTTCCATGGAGAAAAGAGAAAGGGAGACCAAGCACGTTGTAGACGTTGGGTTACTACAACACGTTGGGGTTAACATTGTAGAGTACGTATGTCAAACTCACTTAATATCTAGGTCAGGGGTGGGGAACCTTCTCCGGAGTAAAGGCCACATTATCATCCACTTCCCCAGAAGACCAAAACCAACAGCTACGCGAATTCTTATATATAATATAAAGGCCACATTAGTATCGTCCACTTCCCCAGAAGACCAAGACCAATAG
Protein Sequence
MAVFKSDIKRRCKDGHNTMESVPKRAKVHAQRKFAQGLGAGCSMVPIKEKEKTKSNGCSEPCDISPADRPKTEDFLTFLCFRGTSALPSRLDFFNVASVSDGVATSSQMTRTGKISFSITFCLSYPDGQPPFKIESYSIVSCAVISREMARMRKRKQKLKVVKHSAVKIHPNKYKDNRSKVNKSVSRIFRKDGRKEAGRRGGSLVVKTSRLKRRKQSMVLASKRPQRASASNSLKHRRRVEKRTPSALVKRRLETNSVVARVPDSIRKSARPLGYSSDSDGDENEDDEEEEGEEEGNNDKNTNNTIRTRTRSSSLKTHVSPAPSLKKMPSRKTKEAAHVYMEIITKDLRSPDEVDDEVDNDQAGAEDKKGVSSDSEPLDVKKKKQETKKRRVNLRSNQNKTKNSLRDKSLKRDTPAKNLRVQSRLRKRSVSRVELKEEAKVTSSTDNGNSRKVLRRTRGRNVRKIVKEEESNEETNESEEESDSESDSGEKQELSPKKSKRLGNRMKQRNFEKGSYEKDDSNRRSLRSMAQDKGNKGVRETREDSTKDEESIKPEKKKPISKSKEVKENTKMNVSLKENSVKNSVDISSKTKSVTKIVKENENVSKDSTMKESAKSRRTRRKGVDVKKEVKTTDQNSGRSTRLSQQKNTGNKVKESANSSKTEDKEIKKADISPVRTKSNMRKTIEEIVPDTTEKLNTNKTTNDKVKEVALEKNDESSSIKAECDEKNVSNEKKDISKKTKENKNIQENNSLKSESVLKRTTSTASESNKVKKPKYSVKQETASESKKDVIKEKDDEVDSHEILKVSEKKPQSLIETSERRRTRSSSLTKVDSESKDLNENTKPKPEGIRSRKSSFLSEQNKTNLNTGDAKLENKLVEEKILEKDPEDIPLSRRSSVSSILSSTETVISNCKVMFENLDLQPSTIKSEGVFKKKILPVSRASDIPFISRVEVPKKGKSLNKTRRKVAKYSDDSTDSEGDLKLSRKEARLRRSAKGRDGVLGRPKRDLTYTNQPVKRMPRARSAKHSSSSFYYETDSSSHFSSSEEDIKIVKEPTKTNRDKSVSGSLTSTDKCKTNIQKVIKQPEIVEAAKIKEKSKDDFVKSDTVNNSDEVINVLNSNSRESPNKDGLKKLSHGIKVEKNVHLNQSKENTKSELTLDKKELKLKSGDISPVKKDFEMPEDLMDINIDFDHKSLLTDEQRKDIVNMCVSEPLEILSEVSSRITELASMKMEAVRQKNESRKQAVAPVCSPLEVKIKVETEKQVEVKAPAFETKTSNDVKVKENLPNKPESKLKPSISETWRQAFKNAKIPKPGQLTPISHSVKPFVRKPFTNQAMIGKSLPPRSENSEKKFKAHEHSQFKSLAQKNDIESGEKMTNTLLRAVKPITSVSPNQQTKEGGKSSPFNEFHQGVNNLTVPGVKPVEKTISSPAAGQDDVKVSKVDGGSEKLETSANENINLNQRDRSLMGDKKSAEGKHHNLPMAVEHTLRKMSPVTVSKKPTASKPLQVIPTDSEGIIKSSKSSPSSSSRSSWLWKPEKLLSDSPGKPCDFDILAKKKVNMTAEEITKWLNDSTSAGIEHAKDCGLFERNQCECGFRTGEASMKSSLVSSLVDLKVGHSIVEPPIQLKDLDPKCTGETISSCKVEDYKEKMYMKSNEQKSPPKKEAASNTKMKQGAKGEKAWKSTRSMTEEEMCEFDFRFERNSSSTRDSGSEMSSPTPKDEVSSNDESGMEKKSIFQKKIKRPLSQSPCAFNAENESSVYAFEPDLPEVNKPFRRRSKSKSEEGDSGSASIAVQVNIDQETVLECSTQTDREEQGGPTFFLPLKGQQNEQVIQGVTVKLDADGDGDEHRVIMRAKIVTKPTPTFPCAGSKGSRKPEQKVRPLPTAPGSSSKAPVGAVQPTVRAETSNQSTQSSNTKLPTDSKATSPLHASDSVGKGEKNSSISEGGKVSQQLKEAPSFYPTEKEFQDPLEYIEKITPEAEKFGICRIVPPSNFKPDCKVSDDMRFTAYNQYIHKMLQRWGPNVQEMSAIKKYLATQSITLNQPPWIGGMEVDLPRLYQTVQQCGGLKEVIEKKRWTRVADLMKIPKSAQDRVTKLDDIYCKYLLPYDTLSHEERSKLLDEVEAEWKERQRKSLALSSSPTQNSSDEDESDSSDDGLDECIIKGRSMALNGFYRIARNTMWMWFGDSNPSAGDVEGEYWKHVTNRTCHVCVHSGSIDSGTWGYGFPTTKTSATSKHPWNLKVLTNNPGSILRYIGPLMGVTVPTLHVGMLFSTFCWYRDPHGLPWIEYLHTGASKIWYGVADDCRAQLQAAIASLLPQIVRDSPVWLPSDTAMVPPDLLLEKGVSLCRVVQEPGHFILVFPKAYTSAICTGYLVSESVYFAQSNWLSSADNTFQATRESCEPTMFSLDKLLFSVASDTRTPLEVLTQVEPMVEKVRSREVSERKELRKLGLNCSERLPKPPRRHSRPDDQEQYECSQCRASLFVSMEKRERETKHVVDVGLLQHVGVNIVEYVCQTHLISRSGVGNLLRSKGHIIIHFPRRPKPTATRILIYNIKATLVSSTSPEDQDQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-