Hlin078438.1
Basic Information
- Gene Symbol
- Kdm5
- Assembly
- GCA_026182355.1
- Location
- JAPFBL010000030.1:231925-251815[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-24 9.5e-21 76.0 0.1 2 89 95 178 94 178 0.93
Sequence Information
- Coding Sequence
- ATGGATGATGCACACTGCATTGTAAATGGTGGGACAAAATATAAACAAAATGATTTTGTTTTCATCTCTCCACAAGAAGCGCCTGTATTTGAGCCTACTCTGGATGAATTTAAAGATCCCATTGCTTATATTAGTAGTATCAAAGAAATCGCTGAAAAAACTGGGATCTGCAAAATCAAACCTCCTCCGGAATGGCAGCCTCCATTTGCATTGGATATAGAAAAGTTCAAGTTTACTCCAAGATTACAGCGTTTAAATGAACTTGAGGCAAAAACGAGAATTAAATTAAATTTCTTAGATCAGATCGCCAAATTTTGGGAGTTACAAGGTTGCACCCTAAAAATCCCTTTGGTTGAGAGAAAAATTTTAGATCTCTATAGTTTACATCAATGTGTTATTAAAGAAGGTGGATTCAGTAATGTTACCAAAGAAAAATTATGGCAAAATGTAGCAGCGAGGATGAATTATATGAATGCCAAATGCACAGGATTGCTTTTGAAATCACATTATGAAAGAATATTATACCCGTACGATGTTTTTAAAGAGAGAGAACTAAATGAGAAATTGGTACTGAAGTGTGAGACGTCGTCAAAGCCCAGTGTGAAAAGCACCCCATCATTTCACAGTCCCAAAACGGTTGGGTTGAAAGCAAAACGTGAAGAGAATGTATTGTGTAAAAGTCAAACAAAGAAAGAATTCCTAAGTTACGATCCATTGGCGAAGTATGTTTGCAAAAATTGCAAAAGAGGAGATATTGAAGAATCAATGCTATTATGTGATGGTTGCGACGATAGTTATCACACTTTTTGTTTAATGCCTCCCCTGTCAGACGTTCCCAAAGGCGATTGGCGTTGTCCTAAGTGCATTGCAACCGAAGTGAAGAAACCTGTTGAAGCCTTTGGATTTGAACAAGCCCAGCAAGAATATACCCTCCATCAGTTTGGAGAAATGGCTGATCGATTTAAATCGGATTATTTTAATATGCCTGTTCATAGGGTTCCAACCACTCTTGTAGAAAAAGAATTCTGGAGGTTAGTTTCTTCCATTGATGAAGATGTTTGTGTCGAATATGGAGCAGATTTACATTCTGTTGAACATGGCTCCGGATTTCCTACTAAGAAGACTTCAAATGCTGATGAAGATCCTTCTTTCAAAGCATACGTTGAATCAGGATGGAATTTAAACAATATTCCTGTTCTTTCTGATTCTGTACTATCCTTTATAAATGCTGACATATCTGGCATGAAAGTGCCTTGGATGTACGTTGGAATGTGCTTCGCTACTTTTTGTTGGCATAATGAAGACCATTGGAGCTATTCCATTAATTATTTACACTGGGGTGAGCCAAAAACTTGGTATGGAGTTCCTGGGAGTTATGCTGACGTTTTTGAGAATACAATGAAAAAGGCGGCACCAGAACTTTTCGAAAATCAACCTGATCTATTACATCAGTTGGTCACAATTTTGAATCCCAATTTACTTATGAAAGAAGGTAGTTCCTTGTCATCAATCGTGCTCAGTTCCCTGGACAATCTGAACGTAGACTGGAACTCACCTTCTCCCTCTAAGGAAGACAGACTATCAGCCCCAAGCTACTTACTTTGGGAGGGCGCCAGGTATCCCAAAGGCTCCGTTTGGACACCTAAACTAACCCAGGTGCCTTCCAGTCGGCGCACGGGTCGCTTGACACACCGACATCAGGTCGGTTCAGAATCCTCCTTCCACAGGATGATACGAACAAGAAAACCCAAAAGAGCCGCTTTACTCTCGTTTGTCAGAGTGAGGCAGCTTGGGGCCCCACTCGTGTCCAGGGGTCACCACACGGAGGTGAGAGTAGCGTTGGGCCAGAGAGGCTATAAGCGACGCTTCATAACCCCTTGA
- Protein Sequence
- MDDAHCIVNGGTKYKQNDFVFISPQEAPVFEPTLDEFKDPIAYISSIKEIAEKTGICKIKPPPEWQPPFALDIEKFKFTPRLQRLNELEAKTRIKLNFLDQIAKFWELQGCTLKIPLVERKILDLYSLHQCVIKEGGFSNVTKEKLWQNVAARMNYMNAKCTGLLLKSHYERILYPYDVFKERELNEKLVLKCETSSKPSVKSTPSFHSPKTVGLKAKREENVLCKSQTKKEFLSYDPLAKYVCKNCKRGDIEESMLLCDGCDDSYHTFCLMPPLSDVPKGDWRCPKCIATEVKKPVEAFGFEQAQQEYTLHQFGEMADRFKSDYFNMPVHRVPTTLVEKEFWRLVSSIDEDVCVEYGADLHSVEHGSGFPTKKTSNADEDPSFKAYVESGWNLNNIPVLSDSVLSFINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSYADVFENTMKKAAPELFENQPDLLHQLVTILNPNLLMKEGSSLSSIVLSSLDNLNVDWNSPSPSKEDRLSAPSYLLWEGARYPKGSVWTPKLTQVPSSRRTGRLTHRHQVGSESSFHRMIRTRKPKRAALLSFVRVRQLGAPLVSRGHHTEVRVALGQRGYKRRFITP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -