Hlin035038.1
Basic Information
- Gene Symbol
- Xbp1
- Assembly
- GCA_026182355.1
- Location
- JAPFBL010000172.1:358486-364103[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6 2.1e+04 -2.4 0.7 5 23 46 52 43 55 0.53 2 2 2.8e-16 1.3e-12 49.5 15.6 1 64 58 121 58 128 0.97
Sequence Information
- Coding Sequence
- ATGGTTATTAACAATTGTTTTAAAGAAGTTTCTTATAAAAAGTCTGATAAAATAAGAGAAATGATGATTTCATCAGCGAACTATATGGCAGATTTTTCTTTCTCTTCTCTGGAAGAGTTTGTTTTCGATGAGAAGAAGCAATCTCGAAAGCGGCGTTTGGATCATCTCTCACCAGAAGAAAAAATTAGGCGGAAGAAATTGAAAAATCGTGAAGCTGCACAAACCTCAAGAGATAGGAAAAAGGCTTATATTACAAATTTGGAACAAGCTCTAGATCTTTTAAAAGAACAGAATGAAGCATTATCAGAAAGAGTTGCCAACTTAGAAGTGGAAAATGTAGAATTAAAAAATCAAAATAAGAAATATGAGGAAAACTTGAAAGAAATGACTGAAAGCTTTGGTAAACCTGGGCCTGCCGTGCCCCAAACCCCTCTGCAGCAGGGAAGACCGAAGCAATCAGAGAAACAAGATAATAATGGAATGGTGGGGAGCATACCAGAGAGCGTGGAATCCTCCAACCAATCACAAACCACTGACAGCCTTCCTTCAGAGCAGACCAATACACCGCATGATGAAATATTGCTGATTAATTTATCATCAGACAATGATAAAGAAACTGTTTACATTGAAGATGCCGTTGAAGAGGTTATCACTTCTGATGATGGAATTGAAGCAGAATCTTTGTATTCACCTGTAAAGCAAGAACCAAATATTGCCGAATCGAATTCCGATCTGGGTTATGAATCTGTTGAATCGCCGCTTAGCGAAAATGACTATCTCATGGAACTATTCCCGGATTTATTATAA
- Protein Sequence
- MVINNCFKEVSYKKSDKIREMMISSANYMADFSFSSLEEFVFDEKKQSRKRRLDHLSPEEKIRRKKLKNREAAQTSRDRKKAYITNLEQALDLLKEQNEALSERVANLEVENVELKNQNKKYEENLKEMTESFGKPGPAVPQTPLQQGRPKQSEKQDNNGMVGSIPESVESSNQSQTTDSLPSEQTNTPHDEILLINLSSDNDKETVYIEDAVEEVITSDDGIEAESLYSPVKQEPNIAESNSDLGYESVESPLSENDYLMELFPDLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -