Hmer012395.1
Basic Information
- Insect
- Hermaeophaga mercurialis
- Gene Symbol
- stc
- Assembly
- GCA_951812935.1
- Location
- OX638361.1:4095193-4099237[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2 3.4e+04 -4.8 3.4 6 10 386 390 383 390 0.69 2 13 0.49 8.4e+03 -2.2 0.4 4 10 416 422 416 422 0.93 3 13 0.00017 2.8 8.9 14.7 4 19 431 446 429 446 0.93 4 13 4.2e-09 7.1e-05 23.6 8.7 1 18 482 499 482 500 0.96 5 13 1.1e-09 1.8e-05 25.5 10.7 1 19 540 558 540 558 0.98 6 13 8.2e-07 0.014 16.3 15.1 4 19 605 620 598 620 0.87 7 13 1.3 2.3e+04 -3.6 2.0 5 10 649 654 649 654 0.93 8 13 0.0028 48 5.0 10.8 1 11 660 670 660 682 0.90 9 13 5.5e-10 9.4e-06 26.4 13.5 1 18 687 704 687 705 0.98 10 13 1.7 2.9e+04 -3.9 1.1 5 10 733 738 733 738 0.83 11 13 0.021 3.6e+02 2.2 18.6 1 19 744 761 744 761 0.87 12 13 6.2e-08 0.0011 19.9 19.5 1 19 797 816 797 819 0.96 13 13 0.01 1.7e+02 3.2 15.0 1 18 826 844 826 845 0.92
Sequence Information
- Coding Sequence
- ATGTCTCACAATAATTACTCGAGCGACAATCATCCTTCCGGAGAAGATCACTTTGGCGGTGGTTCTCAAAATTGGAATTCTCAAAGTGAACACTATCAAAGAAACCATCCTGTGGATATATCAAATTCAACCTTAGAGCCTACAGCGAGGGAATTTATTCCTACAAGTTCTCAGAATGGGGCGCTGAGAAAAAAACCccattatcaaaataaatacagaGATAACAAGCACCAAGGAAACTGGAGAAACAGATATGGAAGTGGTAGAACTTTCAATAGTTCTAgaagtaattacaataaatttgccAACGAAGATTCTTCTAACTATCATAGAGGCGATAATTATGATGTACCAACTGATGAACAAAGGTCAAGTTCAGAGTATACGAAAAATTCTAATCATAGATATTCTGATAATACTTATAAAGCAAACTTTGATGTTGATGATTCAGAAAATGGGGATGAAACTGAAAATAATTCTGCACCAAGTTCATCAAAACATTATAGAAATTCTAAAAGATATGACAATGTTTATCAAGGAAAACCTAGAAGTAACTATAGTGAGaagtattctaaaaattatgaaGATAAGAGGGGAGCAAATTATGAAGATAAGAGGGGAGCAAATTATGAAGATAAGAGGGGAGCAAATTATGAAGATAAGAGGGGAGCAAATTATGAAGATAAGAGGGGAGCAAATTATGAAGATAAGAGGGGAGCAAATTATGAAGATAAGAGGAGcgctaattatttaaaacacaatagtaattattcttatttcaaTGAAGATACATCTGCAAGAAAAACTTATAATAATCAGAATTACAAGAAGGGTGggtataaaaattatgattcaCGAAGTAGTCAAAAACCTAAAGAAAGCAGTGTATCCAGTAATTGGAGAAGAGAAGATGCTTATCCAGAAAAGATACCTATAAAGATGGTGAAACATAAGAAAGTTGATGCGGCTTCTCAAAGAGAAAGGTTGGTTGAAATGCTCAACCGGCGCAAGCTAGAATGTCTGGTTTGTtgcgataaaataaaaaattccgaTAAAGTATGGTCTTGCTTGTTATGTTACCACATATTCCATCTAAATTGCGTAGTAGAGTGGgcaaaatcatcaaaaatagaAAACGGTTGGCGGTGCCCAGCTTGTCAAAATGTTTGCAGTGAAGTTCCTAAAAAGTACAGCTGCTATTGTGGTAAAACTGTAGAGCCTAGATATGAACCCGGTTTATTGCCGCACAGTTGTGGGGAGATGTGCTTGAGAAAGGGCCGGAACTGTGACCACAAATGTAGCATACAGTGTCACCCAGGACCATGCCCAGATTGTACCATCATGATTTCCAAATCTTGTGGCTGTGGGTCTACTAAGCAAATGGTGAAATGCAGTACAGATGTTGAGGTTATTTGCGATTCCGTTTGTAATAAACAGTTGGAATGTGGTCTTCATTATTGCGAGCAGATATGTCATTCAGGTGACTGCGAACTATGCAACAGAACCATTTTGCAGGAATGTTATTGTGCCAAAGAAGGCAGAAAGGTCCCTTGTTGTGGAAAATTCAAAGGTCAAACGCAGTATTCATGTGGGGAAATATGTGGGAAGCTAATGTCTTGTGGGAATCATTATTGCCAGCAATTATGTCACGAAGGCCTTTGTGAGATATGTCCTAAGGACGTTAGCATTATCAAAAGTTGCCCATGCGGAAAGACATCACTAAGCCAACCTAGATTATCCTGTTTAGATCCCATTCCATGTTGTGATAAGATATGTGGTAGAGTTTTAAATTGTGGCCAACCAAATGCTCCACATCGATGCGAAAAGCAGTGTCATGAGGGGCCTTGTCCAGTTTGCCCAAAAGCTACTGTTGTTAGGTGCAGATGTGGACATATGGATAAAGAATTACCTTGTCAAGAACTTACTACAAAAGCCGATGATGCCAGATGCGAGAAAAAATGTACAAAGAAACGTTTATGTGGCAAACACAGATGTAATCAGCTATGTTGCATAGAAGTGGAACACATATGTCCACTTCCTTGCAATCATTTGCTGACTTGTGGCCAACACCGCTGCGAGCGCACTTGCCATTCTGGTCGTTGTCCAACTTGTATGGAAACAAGCTTTGAGGAATTATATTGCGAATGCGGAGCTAGCGTTTTGTACCCGCCTATTCCTTGCGGGACTAAGCCGCCAAATTGTACCAAACCTTGTTCCAGACGGAGGCCTTGTGGTCATGACGCTAATCACTGTTGTCATACGGGGCCATGTCCTCCTTGCACCATACTTTGCAAGAGATGGTGTTACGGTCATCACGAACAGAGGTCTGCCATTCCTTGTCATCAGGAGAACTTTAGCTGCGGATTGCCTTGTGGGAAAGAAGCACCTTGCGGAAAACACAAGTGTATTAAACCTTGTCACGACGGACCATGTCCTAGTCCCTGCAAACAGCCTTGTACTGTGCCTAGGGAGTTGTGCGGTCACATTTGTGGCAGacCATGTCATGATCCACCTTGTCCTGAAAGCAGCTGTAAACAAAGTGTTCCAGTAACTTGTCAGTGTGGTTTGCAGAAAAGTACAAGACCCTGTTTGGAGGTTGCCgatgaatttttaaacatcCAGATGGCGCAGTTGAAGGATAAAATGGGAAGTTTGGCAACCAGTTCAACTGTTGATTTAACTGATATAGTCAATGTTCCAAAAAAGCCATCAGTTCTCAAAATctTAGAATGTACAGAAGAATGTTTCGTTTTGGAGAGGAACCGACGATTAGCGATTGGTTTGCAAATAAGAAATCCGGATTTAAGCCAAAAACTCACTCCTAGATATTCTGATTTTCTAAAACAGTGGGGAAAGAAGGACTCTCATTTTTGCCAAAGAGTTCACGACAAACTTACTGAGCTCGTTCAATTATCCAAGAACAGTAAACAGAAAAGCAGATCATATTCCTTCGACTCTATGAACCGGGACAAGCGGCATTTCATACACGAATATTGCGAACATTTCGGAGTGGAAAGCGCAGCTTATGATATGGAACCGAACAGAAATATCGTCGCTACAGCGATCAAAGATAAATCTTGGCTGCCTAGTATGAGTTTGCTAGAATTTTTACAAAGAGAAAGCGGCCAGAGGAAGGTTCCAGGACCCTTTTTGGGTAGAGGGGCGAACGCTAAAAACGAAACAGTATCGCTAAAATTGCCCAGCAGAGTACAAAGGCCGAATACACCTCCTAATGATCATAGTTGA
- Protein Sequence
- MSHNNYSSDNHPSGEDHFGGGSQNWNSQSEHYQRNHPVDISNSTLEPTAREFIPTSSQNGALRKKPHYQNKYRDNKHQGNWRNRYGSGRTFNSSRSNYNKFANEDSSNYHRGDNYDVPTDEQRSSSEYTKNSNHRYSDNTYKANFDVDDSENGDETENNSAPSSSKHYRNSKRYDNVYQGKPRSNYSEKYSKNYEDKRGANYEDKRGANYEDKRGANYEDKRGANYEDKRGANYEDKRGANYEDKRSANYLKHNSNYSYFNEDTSARKTYNNQNYKKGGYKNYDSRSSQKPKESSVSSNWRREDAYPEKIPIKMVKHKKVDAASQRERLVEMLNRRKLECLVCCDKIKNSDKVWSCLLCYHIFHLNCVVEWAKSSKIENGWRCPACQNVCSEVPKKYSCYCGKTVEPRYEPGLLPHSCGEMCLRKGRNCDHKCSIQCHPGPCPDCTIMISKSCGCGSTKQMVKCSTDVEVICDSVCNKQLECGLHYCEQICHSGDCELCNRTILQECYCAKEGRKVPCCGKFKGQTQYSCGEICGKLMSCGNHYCQQLCHEGLCEICPKDVSIIKSCPCGKTSLSQPRLSCLDPIPCCDKICGRVLNCGQPNAPHRCEKQCHEGPCPVCPKATVVRCRCGHMDKELPCQELTTKADDARCEKKCTKKRLCGKHRCNQLCCIEVEHICPLPCNHLLTCGQHRCERTCHSGRCPTCMETSFEELYCECGASVLYPPIPCGTKPPNCTKPCSRRRPCGHDANHCCHTGPCPPCTILCKRWCYGHHEQRSAIPCHQENFSCGLPCGKEAPCGKHKCIKPCHDGPCPSPCKQPCTVPRELCGHICGRPCHDPPCPESSCKQSVPVTCQCGLQKSTRPCLEVADEFLNIQMAQLKDKMGSLATSSTVDLTDIVNVPKKPSVLKILECTEECFVLERNRRLAIGLQIRNPDLSQKLTPRYSDFLKQWGKKDSHFCQRVHDKLTELVQLSKNSKQKSRSYSFDSMNRDKRHFIHEYCEHFGVESAAYDMEPNRNIVATAIKDKSWLPSMSLLEFLQRESGQRKVPGPFLGRGANAKNETVSLKLPSRVQRPNTPPNDHS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -