Hmer019992.1
Basic Information
- Insect
- Hermaeophaga mercurialis
- Gene Symbol
- pnr
- Assembly
- GCA_951812935.1
- Location
- OX638363.1:974396-986955[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4 1.4e+04 -3.3 0.0 4 16 30 45 30 49 0.73 2 3 1.4e-17 4.9e-14 52.5 1.8 1 35 306 339 306 340 0.97 3 3 1.6e-17 5.6e-14 52.3 7.6 1 35 362 395 362 396 0.97
Sequence Information
- Coding Sequence
- ATGGAATCGAAAGAAGACCACCATCGCCAGCCGTCCCCGGACGACGTAAAACCGAAAATAGAAACGTCGGAAACCGTGGCACCGCCGTGCCAAACCAACGGTACCGGCGTGATCCGAAGAAATTACATAACACCAGCCGGTACCATCATCGAAACAACAAACGAGGAACAACAAGCGCCGGAACCGACAACCGAGGAAATCGTGAACACGTCGACGCCGCAGGAACAGAGCCCGGTCGAACAGAAAATCGAGCCGAACAACGAGCCGGGAACGTACGCGGAAATTCTGCCGCAGGAACAACAAAGGGAACAATTCGCAGACGCGAAACCGTACGCCGTGGAAATCCAGGCGGAGGAAAATTTCCAGAATCAGAATTTTCCCCAAGAAATCAGCTACGCCACCGTTAACATCGAAGGGACAGAAGTTCCGGTGACTTTGTCTACGGAAATCGAACATCCTGGTGATTACGCGAATTTACAAACTGCCCAGTATAATAATGGTTACACTGACGGGCCGCAGTATTTGGCCCAACACCAGTACCAAAATCTGTACATCGAAAGGGGTGGGGTGGACCATTCCCCCCCGACGACGCTCTTGTACAGAGATGATCCCAACTTGGCCGCTTCCAGGTACCAACCGAACTACGACGTGACCAGCACCCAATCCCAAGTGAACCTGCTTCCGGCGTCCTCCGGGGACTCGTACTACACCACGACCGGCAACTGGACATCGACGGGTGGCGGAGGCggcagcggcggcggcggcggttcTTACCCTCAGCAGTACGCCAACATAAACATACTGCACCAACCGGACAGTACGCAGTCGTACGTGGGCAATTACGCAAATTCGACGTGGTCGTCGAACGCCATGGAGGATGGACGGCCGTCCAGTCAAGAGGTACTTGTGAAAGAGTGCGTTAATTGTGGCGCTAGTGTAACACCACTTTGGCGTAGAGACGGTACAGGGCATTATCTATGTAACGCGTGCGGTTTATACCACAAAATTAATGGGGTGCACAGACCGCCCATTAGGCCTACGAAAAAACCACAGGCGACGGGAAGCCGAAGAAACGGTGTGATTTGTGCCAATTGCAAAACAAATAATACTACGCTTTGGAGAAGAAACAACCAAGGCGAACCGGTTTGCAACGCGTGCGGTTTGTACTATAAACTGCACAatGTTAACAGGCCGATCAGTATGAAAAAAGATGGCATCCAAACGCGCAAAAGGAGGCCCAAAAACTCGTCCGTGGAGAACCCCGTCAACGCCAGCCAAATGAGGATGGgaaacataaattttcaatattcacAAGAGCTGGAAATGGCCCAAGATCAGTACCTTTTACCGAACAACGTTTTCCACCAGCCCCAAACGTCTTTCAGACAATTTTCATCTGAAAATCTTCGAGGCTTAAACGTCCAACCTCTACAACCGATCATCACCGCCGAAGACGAACAAGCCAGCGTCATCACATCTACGTCACAACAAAACAGGTTTCGAGCCGACGTACCTGAAGATGAAGACGGAAACAGCAATCCATCAACGCACGCATAa
- Protein Sequence
- MESKEDHHRQPSPDDVKPKIETSETVAPPCQTNGTGVIRRNYITPAGTIIETTNEEQQAPEPTTEEIVNTSTPQEQSPVEQKIEPNNEPGTYAEILPQEQQREQFADAKPYAVEIQAEENFQNQNFPQEISYATVNIEGTEVPVTLSTEIEHPGDYANLQTAQYNNGYTDGPQYLAQHQYQNLYIERGGVDHSPPTTLLYRDDPNLAASRYQPNYDVTSTQSQVNLLPASSGDSYYTTTGNWTSTGGGGGSGGGGGSYPQQYANINILHQPDSTQSYVGNYANSTWSSNAMEDGRPSSQEVLVKECVNCGASVTPLWRRDGTGHYLCNACGLYHKINGVHRPPIRPTKKPQATGSRRNGVICANCKTNNTTLWRRNNQGEPVCNACGLYYKLHNVNRPISMKKDGIQTRKRRPKNSSVENPVNASQMRMGNINFQYSQELEMAQDQYLLPNNVFHQPQTSFRQFSSENLRGLNVQPLQPIITAEDEQASVITSTSQQNRFRADVPEDEDGNSNPSTHA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -