Basic Information

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 3.9e-18 1.3e-14 54.3 2.7 1 34 85 117 85 119 0.97

2 3 2e-18 7e-15 55.2 4.9 1 35 139 172 139 173 0.97

3 3 0.61 2.1e+03 -0.7 0.2 6 19 298 311 297 313 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	3.9e-18	1.3e-14	54.3	2.7	1	34	85	117	85	119	0.97
2	3	2e-18	7e-15	55.2	4.9	1	35	139	172	139	173	0.97
3	3	0.61	2.1e+03	-0.7	0.2	6	19	298	311	297	313	0.82

Coding Sequence: ATGTTTAACATCTCGGCACGCTTCTGTCCGATAAAAACTGATAAAACCCCGTCCGCTGCTGAACATCGAACATCGAAATCGCTTTCGTTTTCCATCTCTTCTGGCTCGACGTTTCCGGTCTCCGAACGTACCTTTCCTGCCCTTTCCCCTCACCATTTTCGACAAACTTACCTGGTTTCCGTCGAGACGGGACGCCGGCCCAATGTCGAGGTCGATCCACGCACGGCGGAATTCTTCACCGAAGGTCGAGAGTGTGTCAATTGTGGCGCAATTGACACCCCGTTGTGGCGCAGAGACGGCACCGGCCACTATTTGTGCAACGCGTGTGGCCTCTACCACAAGATGAACGGAATGAACCGGCCTCTTGTCAAGCAGCCTCGTAgattgTCTGCCTCCCGTCGAGCCGGGCTGACGTGCACGAATTGTCACACGAGCACCACCTCCCTTTGGAGGCGGAACGCCCTCGGGGAGCCGGTCTGCAACGCTTGCGGCCTCTACTATAAACTGCATTCGGTCAACAGACCTCTTTCGATGAAGAAGGACAGTATTCAGACAAGAAAAAGGAAACCGAAAGGAAGTAAAGAATCGAATGCGAGCAGTACCCACATTCCGAGAAATCTCACAAATGCAGCATTAACATCGATTAAAATGGAAGATGGAATAAAATTAGAACATACACCATTAGATAATTACAGCGAACTGAGAACGGTGACGTCATTGAATCAGCTGCAGCACGCGTCTACTACCAGTTACGCGTACGCCGGCCAAACGACGCACCAGAGATTGAGCCCCGCGTACTCTTCACAATCGCCGCAACTTACGGCGCAATCGCACTATTACGAATCCATCTTGCAACAACCAACACCCAGTCCACCATCCAACGAATCGGACACTGAAACTACCTCTCTTTTgaataacaacaacaacaacaacaacaacaacaacaacagcaCCAAAGTCATCATCAACGGAGATCACTGCGTCGATAGACCCACCGTCGTCTCGCTCTCCTCCTAA
Protein Sequence: MFNISARFCPIKTDKTPSAAEHRTSKSLSFSISSGSTFPVSERTFPALSPHHFRQTYLVSVETGRRPNVEVDPRTAEFFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRAGLTCTNCHTSTTSLWRRNALGEPVCNACGLYYKLHSVNRPLSMKKDSIQTRKRKPKGSKESNASSTHIPRNLTNAALTSIKMEDGIKLEHTPLDNYSELRTVTSLNQLQHASTTSYAYAGQTTHQRLSPAYSSQSPQLTAQSHYYESILQQPTPSPPSNESDTETTSLLNNNNNNNNNNNNSTKVIINGDHCVDRPTVVSLSS

Sequence clustering based on sequence similarity using MMseqs2