Basic Information

Insect: Hermaeophaga mercurialis
Gene Symbol: -
Assembly: GCA_951812935.1
Location: OX638362.1:37164026-37166959[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.028 3.3 9.2 1.6 1 23 77 100 77 100 0.91

2 24 0.00071 0.084 14.3 1.0 1 23 124 147 124 147 0.96

3 24 0.0018 0.22 13.0 3.2 2 23 209 231 208 231 0.94

4 24 6.7 7.9e+02 1.7 0.0 5 21 312 328 311 329 0.90

5 24 0.0007 0.083 14.3 0.6 1 23 353 376 353 376 0.97

6 24 0.066 7.7 8.1 1.1 3 23 381 402 379 402 0.94

7 24 8.2e-05 0.0097 17.2 1.3 1 23 405 428 405 428 0.97

8 24 2.9 3.4e+02 2.9 0.1 1 23 433 456 433 456 0.92

9 24 2e-05 0.0023 19.2 1.2 1 23 460 483 460 483 0.94

10 24 1.6 1.9e+02 3.7 0.1 10 23 494 508 493 508 0.92

11 24 0.0031 0.36 12.3 1.3 3 23 543 563 542 563 0.96

12 24 0.005 0.59 11.6 0.2 1 23 569 592 569 592 0.95

13 24 0.0012 0.14 13.5 0.8 2 23 595 617 594 617 0.94

14 24 0.078 9.3 7.8 0.4 1 23 623 646 623 646 0.96

15 24 0.0077 0.9 11.0 0.4 3 23 650 671 648 671 0.90

16 24 2.2e-05 0.0026 19.0 1.4 1 23 677 700 677 700 0.90

17 24 0.0018 0.22 13.0 1.1 2 23 732 754 731 754 0.90

18 24 0.0023 0.27 12.7 0.4 1 23 760 783 760 783 0.96

19 24 0.02 2.3 9.7 2.4 2 23 786 808 785 808 0.90

20 24 1.3 1.6e+02 4.0 0.2 1 21 814 834 814 837 0.76

21 24 0.0099 1.2 10.7 2.2 2 23 840 862 839 862 0.92

22 24 6.1 7.2e+02 1.9 2.9 1 23 868 890 868 891 0.92

23 24 0.095 11 7.6 0.8 2 23 897 918 896 918 0.95

24 24 1.8 2.1e+02 3.6 1.8 1 23 924 947 924 947 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.028	3.3	9.2	1.6	1	23	77	100	77	100	0.91
2	24	0.00071	0.084	14.3	1.0	1	23	124	147	124	147	0.96
3	24	0.0018	0.22	13.0	3.2	2	23	209	231	208	231	0.94
4	24	6.7	7.9e+02	1.7	0.0	5	21	312	328	311	329	0.90
5	24	0.0007	0.083	14.3	0.6	1	23	353	376	353	376	0.97
6	24	0.066	7.7	8.1	1.1	3	23	381	402	379	402	0.94
7	24	8.2e-05	0.0097	17.2	1.3	1	23	405	428	405	428	0.97
8	24	2.9	3.4e+02	2.9	0.1	1	23	433	456	433	456	0.92
9	24	2e-05	0.0023	19.2	1.2	1	23	460	483	460	483	0.94
10	24	1.6	1.9e+02	3.7	0.1	10	23	494	508	493	508	0.92
11	24	0.0031	0.36	12.3	1.3	3	23	543	563	542	563	0.96
12	24	0.005	0.59	11.6	0.2	1	23	569	592	569	592	0.95
13	24	0.0012	0.14	13.5	0.8	2	23	595	617	594	617	0.94
14	24	0.078	9.3	7.8	0.4	1	23	623	646	623	646	0.96
15	24	0.0077	0.9	11.0	0.4	3	23	650	671	648	671	0.90
16	24	2.2e-05	0.0026	19.0	1.4	1	23	677	700	677	700	0.90
17	24	0.0018	0.22	13.0	1.1	2	23	732	754	731	754	0.90
18	24	0.0023	0.27	12.7	0.4	1	23	760	783	760	783	0.96
19	24	0.02	2.3	9.7	2.4	2	23	786	808	785	808	0.90
20	24	1.3	1.6e+02	4.0	0.2	1	21	814	834	814	837	0.76
21	24	0.0099	1.2	10.7	2.2	2	23	840	862	839	862	0.92
22	24	6.1	7.2e+02	1.9	2.9	1	23	868	890	868	891	0.92
23	24	0.095	11	7.6	0.8	2	23	897	918	896	918	0.95
24	24	1.8	2.1e+02	3.6	1.8	1	23	924	947	924	947	0.94

Sequence Information

Coding Sequence: ATGTTTGGCTGCAATTTCTgcgatttatttttcaatactgAATGTGGAAGAGATCATCACACCGCAGAGGTTCATGGGGCGACTGGTACTAGCATTTTCAACCAGAGCGGAGTAATGTGTAGTTGTTGTAAGACTCAGTATGAAAGTTTGATAAAGCACTTGGATGTCTACAATTACAATAATTCTATTTCTCATATTGAAACATCTGCACTAAAAACGGAAAAGACTTTCTCTTGTGCATATTGTCAAGGAACTTTTACATCTAAAAAAAGTAGGAAAAAACATGTTGCAGCGAAGCATAATGATCTAAAAATATCAACTAATATTAATCAACATACACTAACTAAACATACAActcaacaaaaatgttttatttgcaatGTCTGTTCAAAACAATTTAATGATAAACTAGCCTTAGAACAACACAAATCAACAAAGCATAGAACACTTCAACCACTGCAGCCACATGAAAAAATTGTGCCTGCATATAAAGAAAACATACCGCTTACTCTAGCGAATCTTTTGCCTTCTACAGATTGTGCCAAAAAAAATGccgaacaaaaaataaataatacagaaaataaGCATTTGCTAGATAAAAACAGAGCTTATCTAACTCAGTTGTCTTGTACACATTGTTCTAAAACATTTCAAACAGAAATTCAGTTGCAACAGCATAGAGAATCGAAGCATGAGTTACATCAAAGTAGACATCCTGTGACCCCATTGCCTCCTAAAAATGGAACTAAAGCAGTAGTACAGCCacatcaaaatgaaatcgtacaTAAAATAAACAGCTGTGTTtgcattttttgtttaaaaatatttaaggctACAGAACACTTGGAACAGCATAAATTGGCCAAACATGGCCTTCATATAAATCAATTATATCAGACTAAAATGcctcagaaaattaaaaataattttaataattgttcaaaAACCGTCAACACGGTAAAAGCTTTAGAACAACATACACTAGTTCAGCAAgattttccacaaaaaaatcCTTTGTCTTTGACCACTGATCAAGAAACACAGCTCCATAAGATATTTAGTTGCAAATATTGTAAAAAGACGGTGAAAGATATGGTAGGTCTGTCTAGTCATATTAATTCAGTTCATGGTTACGTCCATTGTGACATTTGTAATACAATGTTTATGAAAACTCAAGATTTTGTGAATCATTTAAAAGAAgttcacaatatttttagatgtttCATCTGTAATAAATCCTTTAAAAGCACTGCTGCAATTAAACAACATATGGAAAGTACTCATGAATATACAATTTTTCCTTGTGAActttgttttgaatatttacaaAGTCAATTGCAATTAAATGAACATGTACAAGCAGTTCATAATGTACATTTCTCTTGCAATGACTGCAcaaagagttttaaaaaattgaaagatttaGAACAACATCAATTAGATATTCATACAAAATTAGTACCTACTACCATTAACCAATTTTCGAATCTGGCAGAATTAAATACTCACATAAGGTTTCCACATGAAATACCTAAATTACCactaaaatcagaaaataatctaaaatctaaaaattgtgtaaatagtctagaactatttaatacagaaaaaagcaaactaaatatttgcaactattgcaataaaaaattagaaagtgaACACGACCTAAGAAAACATGAAGAAGTTCACAAATTTGTGGATTATTTCGCTTGTCAGAACTGTGATCAAGTCTTTTTTTCAGAGgccaaaatgaaaatacatattGAGTCAGTACACAGATCTATGTGTggttattgtttaaaacaatttggTACTAAAGATGAGCTTCAAAAACACAAAGAAATGAcacatctaaataaaaattattttccttgtgAAATTTGTTCTGATATATTTACTTCCAATATTTCTAAGAAACATCATATGGATGTTGCacatgaaataatttgtaattactGCTCTAAGACTTTCAAAGTAGTAACACAAATGAAACAGCATGAAGAAAATGTACACAAAAATGTTGATTTCTTTTCATGTGATTattgttctaaaatttttactacAGAAAGCCATCTTAAGCAACATGAAGGGGTAGTACACGTGGATATTGATTACTTTCCTTGTCTTTACTGTACAGAAATATTGTTATCCAATATCTCTAGAATCAATCATATTGATGCAGTACACAAAGTTACGTGTAGCTACTGtctcaaaaaatttaaagatgcAACACTCTTGAAAAATCATGAggataataaacataaaaacataGATTACTTTCAATGTGATTTGTGTTATCAAGTATTTTCTTCTAATAGATTAAGAAATAATCATATTGAAGTAGTACATAAGGTAAAATGTTGTTACTGTTTCAAAACATTTAATGGTACTGACGATTTAAAACAACATGAAGAAGAAAACCATAAAAATGTGGATTTCTTCCCATGCGAATTTTGCTCTGAAGTGTttgtttctaatattattagaaataatcatATTGATTCTACTCATAAAGTAAAATGTTACTACTGTCTTAAGACGTTTACCGAAATTGATCATCTAAAACAACATGAGCAAGATAAGCACAAGAATGTCGATTTCTTTCCTTGCCATTCATgcttacaaatattttctacagATAAATTACGAGAAACGCATACACTTGCACATCATccaattaataaactaaaatgtaACTACTGCGCTAAAGAATTTGCAgagttcaattttttaaaactacatgaacaacaacataaaaatattgattattttcctTGTGATAATTGTTGTGAAATATTTAGCTCTAATATCAGTAgaagaaaacattatttattagagcacaataaaaaacaaatgccTAGCCATGGGGATGAACTCCAAAAACAACTGGAGcacactaaaaaaattttacagcaACTATctgtaatgaaataa
Protein Sequence: MFGCNFCDLFFNTECGRDHHTAEVHGATGTSIFNQSGVMCSCCKTQYESLIKHLDVYNYNNSISHIETSALKTEKTFSCAYCQGTFTSKKSRKKHVAAKHNDLKISTNINQHTLTKHTTQQKCFICNVCSKQFNDKLALEQHKSTKHRTLQPLQPHEKIVPAYKENIPLTLANLLPSTDCAKKNAEQKINNTENKHLLDKNRAYLTQLSCTHCSKTFQTEIQLQQHRESKHELHQSRHPVTPLPPKNGTKAVVQPHQNEIVHKINSCVCIFCLKIFKATEHLEQHKLAKHGLHINQLYQTKMPQKIKNNFNNCSKTVNTVKALEQHTLVQQDFPQKNPLSLTTDQETQLHKIFSCKYCKKTVKDMVGLSSHINSVHGYVHCDICNTMFMKTQDFVNHLKEVHNIFRCFICNKSFKSTAAIKQHMESTHEYTIFPCELCFEYLQSQLQLNEHVQAVHNVHFSCNDCTKSFKKLKDLEQHQLDIHTKLVPTTINQFSNLAELNTHIRFPHEIPKLPLKSENNLKSKNCVNSLELFNTEKSKLNICNYCNKKLESEHDLRKHEEVHKFVDYFACQNCDQVFFSEAKMKIHIESVHRSMCGYCLKQFGTKDELQKHKEMTHLNKNYFPCEICSDIFTSNISKKHHMDVAHEIICNYCSKTFKVVTQMKQHEENVHKNVDFFSCDYCSKIFTTESHLKQHEGVVHVDIDYFPCLYCTEILLSNISRINHIDAVHKVTCSYCLKKFKDATLLKNHEDNKHKNIDYFQCDLCYQVFSSNRLRNNHIEVVHKVKCCYCFKTFNGTDDLKQHEEENHKNVDFFPCEFCSEVFVSNIIRNNHIDSTHKVKCYYCLKTFTEIDHLKQHEQDKHKNVDFFPCHSCLQIFSTDKLRETHTLAHHPINKLKCNYCAKEFAEFNFLKLHEQQHKNIDYFPCDNCCEIFSSNISRRKHYLLEHNKKQMPSHGDELQKQLEHTKKILQQLSVMK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -