Basic Information

Insect: Hermaeophaga mercurialis
Gene Symbol: -
Assembly: GCA_951812935.1
Location: OX638365.1:34532282-34541183[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.16 19 6.9 4.5 3 23 106 126 105 126 0.96

2 27 1.3 1.5e+02 4.0 5.4 1 23 132 154 132 154 0.98

3 27 0.046 5.5 8.5 5.3 2 23 158 179 157 179 0.97

4 27 0.22 26 6.4 0.2 2 23 186 207 185 207 0.89

5 27 0.00045 0.053 14.9 3.0 1 23 216 239 216 239 0.92

6 27 0.13 16 7.1 0.7 3 23 250 270 248 270 0.97

7 27 2.5e-05 0.003 18.8 0.1 1 23 276 298 276 298 0.98

8 27 0.00065 0.077 14.4 1.4 1 23 304 326 304 326 0.98

9 27 3.6e-05 0.0042 18.3 0.1 1 21 332 352 332 353 0.95

10 27 0.27 32 6.1 0.4 2 23 437 458 436 458 0.91

11 27 0.45 53 5.4 1.2 1 23 464 486 464 486 0.93

12 27 0.16 19 6.8 1.8 1 23 492 514 492 514 0.92

13 27 4.6e-06 0.00055 21.1 2.8 1 23 520 543 520 543 0.98

14 27 2.6e-05 0.0031 18.8 1.7 1 23 555 578 555 578 0.96

15 27 6e-05 0.0071 17.6 0.3 3 23 589 609 587 609 0.97

16 27 7.4e-05 0.0087 17.4 0.6 1 23 615 637 615 637 0.97

17 27 0.00057 0.068 14.6 4.6 1 23 643 665 643 665 0.98

18 27 0.0013 0.16 13.4 0.1 1 19 671 689 671 692 0.85

19 27 0.021 2.5 9.6 0.0 3 23 800 820 798 820 0.93

20 27 1.3 1.6e+02 4.0 5.9 1 23 826 848 826 848 0.97

21 27 0.0062 0.73 11.3 1.9 1 23 854 876 854 876 0.89

22 27 0.00014 0.017 16.5 2.5 1 23 882 905 882 905 0.98

23 27 0.00044 0.052 14.9 1.7 1 23 917 940 917 940 0.94

24 27 0.034 4 9.0 3.0 3 23 951 971 950 971 0.99

25 27 7e-05 0.0083 17.4 1.5 3 23 979 999 977 999 0.97

26 27 6.3e-07 7.4e-05 23.9 0.8 1 23 1005 1027 1005 1027 0.99

27 27 1.7e-05 0.0021 19.3 0.0 2 22 1034 1054 1034 1054 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.16	19	6.9	4.5	3	23	106	126	105	126	0.96
2	27	1.3	1.5e+02	4.0	5.4	1	23	132	154	132	154	0.98
3	27	0.046	5.5	8.5	5.3	2	23	158	179	157	179	0.97
4	27	0.22	26	6.4	0.2	2	23	186	207	185	207	0.89
5	27	0.00045	0.053	14.9	3.0	1	23	216	239	216	239	0.92
6	27	0.13	16	7.1	0.7	3	23	250	270	248	270	0.97
7	27	2.5e-05	0.003	18.8	0.1	1	23	276	298	276	298	0.98
8	27	0.00065	0.077	14.4	1.4	1	23	304	326	304	326	0.98
9	27	3.6e-05	0.0042	18.3	0.1	1	21	332	352	332	353	0.95
10	27	0.27	32	6.1	0.4	2	23	437	458	436	458	0.91
11	27	0.45	53	5.4	1.2	1	23	464	486	464	486	0.93
12	27	0.16	19	6.8	1.8	1	23	492	514	492	514	0.92
13	27	4.6e-06	0.00055	21.1	2.8	1	23	520	543	520	543	0.98
14	27	2.6e-05	0.0031	18.8	1.7	1	23	555	578	555	578	0.96
15	27	6e-05	0.0071	17.6	0.3	3	23	589	609	587	609	0.97
16	27	7.4e-05	0.0087	17.4	0.6	1	23	615	637	615	637	0.97
17	27	0.00057	0.068	14.6	4.6	1	23	643	665	643	665	0.98
18	27	0.0013	0.16	13.4	0.1	1	19	671	689	671	692	0.85
19	27	0.021	2.5	9.6	0.0	3	23	800	820	798	820	0.93
20	27	1.3	1.6e+02	4.0	5.9	1	23	826	848	826	848	0.97
21	27	0.0062	0.73	11.3	1.9	1	23	854	876	854	876	0.89
22	27	0.00014	0.017	16.5	2.5	1	23	882	905	882	905	0.98
23	27	0.00044	0.052	14.9	1.7	1	23	917	940	917	940	0.94
24	27	0.034	4	9.0	3.0	3	23	951	971	950	971	0.99
25	27	7e-05	0.0083	17.4	1.5	3	23	979	999	977	999	0.97
26	27	6.3e-07	7.4e-05	23.9	0.8	1	23	1005	1027	1005	1027	0.99
27	27	1.7e-05	0.0021	19.3	0.0	2	22	1034	1054	1034	1054	0.95

Sequence Information

Coding Sequence: ATGTTAGTAAGTTATTTATTAACAGAATTCATAAAGTTAAAAACCGTACGAAGAATACAGAAAACTCGGAAGAAAAACTTAGTAAACGAATTGGAAACGTACTCCGGCCAAAATAacattcgtttaaaaaataaaaatgcggAGAAAAGGAAGCGTACAAGAAAGCGAACCCTAAATTCAAATTCACCggatcaatttaaaaaagaagtaaatgaaGAAGACACAACGGCAgagaagaaaaggaaaaatatcaaactggATTTAGTGAAAATCGAAAAATTCGTGAACCTAAACGAATTCAAAGAACCGGTCGCTTGTAAACACTGTCACGAGAGTTTCGATACTCACATGGAACTCGGTATGCACTCAATAACGCACTCCAACGAACTCATCTATTCGTGTCACATGTGCGACtttaccaaaacaaaaaaatctattttcaaaAACCACATCCGTAGTCACGATCTGTGGAAATGCGAGAAATGCACTAAAATATTCAAGAGCAAAAGGTGCGCGCTGAAACACTCGAAAACGCACATCGCCAAAAGTTTCGTCCAGTGCGAAATTTGCGGAAAAGACGTTAGAAACGTGTATTTGGACACGCACAAAAAACTCGTACACGCCGACGAGAAATCCGTGCAAATTTACAAATGTCACTTGTGCGACAAAGCGTACAAAAACTCCACGGCCCTAAAGGGCCACTACTCCTTCAACCACAAGGACTACGGCATCGATACGTCCGTTATTTGTGATATTTGCGGGCTGCGACTCTCCTGCAAAGGGAAATTAGGGCAGCACTTGAGAACGCACACCGGTGACCGGCCGTTCCCGTGTACGGTTTGTCCTCGCAGATTCATTTCCAAGGACATCCTCAGGGCCCACATGAGGGTCCATACCGGGGAAAAACCGTACGTTTGTATGTACTGCGGGAAGAAATTCGCTCACGGCGCGCCCTACCGATACCACATCAAAACGCACACCGGTGAGAAATCGTTCATTTGCAGCGTATGCGGCAAAGGATTCATATCCAGGGCCAACATGAGGATCCATATGAAAAGTTGTATGTTTCCCGTTAAAATATTCAACGAATATCctgttGTCAGACACGAGAGTTGCCCGCGCGCGTTAACACCTCACAATCTCAACTTCAAATCTGTAACTGTCAAACCTATATTAGGAGCGCTAGAATTTGAATTATGTTCAGTAACGCCTTGTAGAAAAAAGCGCAACGGCGCCAAGAGCCGAAACTCCTCGAAAACAAAACCCCAAAAATCCCTGATCTCTCCAGTAAAACTCGAAGTACCTCTAATCTGTTCGCATTGCGAACAAAAGTACGACAACAACGTCGATTTCGCTTTGCATTCCATTGAACACAGCGACGAGAAAAAGTACTCTTGCCACATTTGCGACTACGTCAACAACTCCAAGTACCGGACAGAGGCGCACGTCAGGGCTCACgaagggtcctcgaagtaccGATGCGATATTTGCTACAAACCGTTCAACATAAGCACCCACGCTGTCGAGCACAGGTACTACCACACCGGAGAAAAACCGTTCCAATGCGAAATTTGCGGAAAGCACTTTGTGTTTTCGAGGATGTTGACCAAGCACAGAAGGTCGGCGCATTACGAGGTTATTTTTGGGAAGCCGTTGGCAAAATATGACTGCAAGatatgcGGCAAACATTACAAATCTTTACCAGGGCTGCAGCGTCACATGTACAGCAACCATAATGATACAGGTCAAGATTGGTCTGTAATTTGTGATATTTGTGGTAAAAAAATCGCTACAAAGGAAAAATTAAAGTACCATTTAAGAACCCATACAGGAGACAGACCTTTTGCCTGCAACTCGTGCCCTAGGAAATTTCCAAAAAAGGATCAGCTAAAGGAGCACGAAAGGGTTCACACTGGCGAAAAACCTTTCATCTGTACGTACTGTGGAAAACATTTTGGACACAGGGCCCCATTTAGGTACCATATAAAAACCCATACGGGGGAGAGACCGTACACTTGTCCTATATGTGGAAAAGGTTTTATTTCGAAATCTGCCAAATCGGGTCATGCCTTAACTTgtattaaaaaGCTAACATCACTGGTGCCTCAAATAAAACTAGAAACTGAGGAGGAATTCGATTCAGAAACCGAATGGATGCCCGAAGAAGAAAAAGCAAAAAAGGAGAAGCTAAGAAAAGAACAGCTGAAGAGGGCACGGAAAGAACTAAAGGAGAAACTAAAGCAAGAGAAACGCGAAAGGAAATCGAACAAGGACTGTACGAAAgttaaaaaaccgaaaaaggaGAAGAAGGAAAAACGCgagaagaaagaaaagaaacgAAGAAAACGCAACACCGACGCTCATCCGGCCCCGCAAGAATTAGACGAGCCGATCATTTGCGACGTGTGCGACCAAACTTACAAAAATAACGTCGCGTTCGCCTTACATTCCATAATTCATAGCGACGACGGTAAATATCACTGCCACTTGTGCTCTTACCGAAACGCCTCTAAGTACCATTTAGAAATGCACGTGCGCGCCCACGAAGGCGCCACGAAATACAAATGCGAAATTTGTAACAAAGCGTTTACAGTGAGCACCCACGCCGTAGAACACAAGTACTTCCATACGGGAGAGAAACCCTTTCAATGCGAAATATGCGGCAAACACTTCATGTTTTCCTGGTTTTTGGCTTCCCACAGGCGAACTTCCCATTACGAGATACTAACGGGCAGCCCTTTGGTGAAATTCGATTGTACCGTTTGCAACAAGCATTACGCTTCCGCTTCCGGCCTCAGAAGGCACAACCTTAAAAATCACAACGAAACGGGTGTTGATCTTTCTGTTCTTTGCGATATTTGCGGCAAGCAACTATCGAGTAGGGAAAAATTGAAGTTTCACCATCGCACCCACACCGGGTACAAACCGTACGGATGCCAAATGTGCCCTAAACATTTTTCGAAGAAAGAACAGCTGATAGAACACACTCGGGTGCATACGGGGGAGAAACCGTACGTTTGTAAGTACTGCGGCAAAGCGTTTACACAAAGAACGCCGTTAAGGATCCACGAACGGACGCATACGGGCGAAAGACCGAATGTATGTCCCATTTGCGGAAAAGGGTTCATTTCTAAAACGGCGCTGGAAAGCCACATACGTAGTTGTTACAATAATTCGCAGATTATTTTACCGAATGCGATGGAGTACAATCCGTTTTATGCCCCGAATAACACCCCGATGACGCCCATGACGCCCGCCTCTGATATATCGGAACTCGAGCATAAATTTTCATTGTCGGACGCTTTTCTGGATCCTAGACAACACGTCGACGTGATAGGGCATATAACTCCGATGTAA
Protein Sequence: MLVSYLLTEFIKLKTVRRIQKTRKKNLVNELETYSGQNNIRLKNKNAEKRKRTRKRTLNSNSPDQFKKEVNEEDTTAEKKRKNIKLDLVKIEKFVNLNEFKEPVACKHCHESFDTHMELGMHSITHSNELIYSCHMCDFTKTKKSIFKNHIRSHDLWKCEKCTKIFKSKRCALKHSKTHIAKSFVQCEICGKDVRNVYLDTHKKLVHADEKSVQIYKCHLCDKAYKNSTALKGHYSFNHKDYGIDTSVICDICGLRLSCKGKLGQHLRTHTGDRPFPCTVCPRRFISKDILRAHMRVHTGEKPYVCMYCGKKFAHGAPYRYHIKTHTGEKSFICSVCGKGFISRANMRIHMKSCMFPVKIFNEYPVVRHESCPRALTPHNLNFKSVTVKPILGALEFELCSVTPCRKKRNGAKSRNSSKTKPQKSLISPVKLEVPLICSHCEQKYDNNVDFALHSIEHSDEKKYSCHICDYVNNSKYRTEAHVRAHEGSSKYRCDICYKPFNISTHAVEHRYYHTGEKPFQCEICGKHFVFSRMLTKHRRSAHYEVIFGKPLAKYDCKICGKHYKSLPGLQRHMYSNHNDTGQDWSVICDICGKKIATKEKLKYHLRTHTGDRPFACNSCPRKFPKKDQLKEHERVHTGEKPFICTYCGKHFGHRAPFRYHIKTHTGERPYTCPICGKGFISKSAKSGHALTCIKKLTSLVPQIKLETEEEFDSETEWMPEEEKAKKEKLRKEQLKRARKELKEKLKQEKRERKSNKDCTKVKKPKKEKKEKREKKEKKRRKRNTDAHPAPQELDEPIICDVCDQTYKNNVAFALHSIIHSDDGKYHCHLCSYRNASKYHLEMHVRAHEGATKYKCEICNKAFTVSTHAVEHKYFHTGEKPFQCEICGKHFMFSWFLASHRRTSHYEILTGSPLVKFDCTVCNKHYASASGLRRHNLKNHNETGVDLSVLCDICGKQLSSREKLKFHHRTHTGYKPYGCQMCPKHFSKKEQLIEHTRVHTGEKPYVCKYCGKAFTQRTPLRIHERTHTGERPNVCPICGKGFISKTALESHIRSCYNNSQIILPNAMEYNPFYAPNNTPMTPMTPASDISELEHKFSLSDAFLDPRQHVDVIGHITPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -