Basic Information

Insect: Hermaeophaga mercurialis
Gene Symbol: -
Assembly: GCA_951812935.1
Location: OX638365.1:31614899-31622085[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 8.1e-05 0.0096 17.2 2.0 1 23 444 466 444 466 0.96

2 18 3e-05 0.0035 18.6 1.8 1 20 472 491 472 494 0.94

3 18 0.00014 0.016 16.5 1.0 1 23 500 522 500 522 0.98

4 18 0.00061 0.072 14.5 4.3 1 21 528 548 528 550 0.94

5 18 1.4e-05 0.0016 19.6 5.7 1 23 556 578 556 578 0.99

6 18 2.8e-05 0.0033 18.7 5.3 1 23 584 606 584 606 0.97

7 18 4.7e-06 0.00056 21.1 7.2 1 23 612 634 612 634 0.97

8 18 1.1e-07 1.3e-05 26.3 2.7 1 23 640 662 640 662 0.98

9 18 8.1e-05 0.0095 17.2 6.7 1 23 668 690 668 690 0.97

10 18 0.00011 0.013 16.8 4.8 1 23 696 718 696 718 0.97

11 18 1.8e-06 0.00021 22.4 3.0 1 23 724 746 724 746 0.98

12 18 7.3e-06 0.00086 20.5 7.8 1 23 752 774 752 774 0.98

13 18 3.1e-05 0.0037 18.5 9.1 1 23 780 802 780 802 0.98

14 18 1.9e-05 0.0022 19.2 7.7 1 23 808 830 808 830 0.98

15 18 1.2e-05 0.0014 19.9 7.1 1 23 836 858 836 858 0.97

16 18 7e-05 0.0082 17.4 0.4 1 23 864 886 864 886 0.97

17 18 0.098 12 7.5 5.0 1 23 896 918 896 918 0.98

18 18 2.1e-07 2.5e-05 25.4 0.5 1 23 924 946 924 946 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	8.1e-05	0.0096	17.2	2.0	1	23	444	466	444	466	0.96
2	18	3e-05	0.0035	18.6	1.8	1	20	472	491	472	494	0.94
3	18	0.00014	0.016	16.5	1.0	1	23	500	522	500	522	0.98
4	18	0.00061	0.072	14.5	4.3	1	21	528	548	528	550	0.94
5	18	1.4e-05	0.0016	19.6	5.7	1	23	556	578	556	578	0.99
6	18	2.8e-05	0.0033	18.7	5.3	1	23	584	606	584	606	0.97
7	18	4.7e-06	0.00056	21.1	7.2	1	23	612	634	612	634	0.97
8	18	1.1e-07	1.3e-05	26.3	2.7	1	23	640	662	640	662	0.98
9	18	8.1e-05	0.0095	17.2	6.7	1	23	668	690	668	690	0.97
10	18	0.00011	0.013	16.8	4.8	1	23	696	718	696	718	0.97
11	18	1.8e-06	0.00021	22.4	3.0	1	23	724	746	724	746	0.98
12	18	7.3e-06	0.00086	20.5	7.8	1	23	752	774	752	774	0.98
13	18	3.1e-05	0.0037	18.5	9.1	1	23	780	802	780	802	0.98
14	18	1.9e-05	0.0022	19.2	7.7	1	23	808	830	808	830	0.98
15	18	1.2e-05	0.0014	19.9	7.1	1	23	836	858	836	858	0.97
16	18	7e-05	0.0082	17.4	0.4	1	23	864	886	864	886	0.97
17	18	0.098	12	7.5	5.0	1	23	896	918	896	918	0.98
18	18	2.1e-07	2.5e-05	25.4	0.5	1	23	924	946	924	946	0.97

Sequence Information

Coding Sequence: atgaATAGTGATAATCAGAATGTTCTGCCCGCAGTGCATGGCACCTCAAATTCTGAGAATTCTTCTCAAAGAAGTCCAGCAGCGACATCAGTACCCACCGATTTGAGGGTAAATACTACAGCTTTAAATGCTGTAGCATTAAGCAACGTAGCAAAGTACTGGGTATTGACAAATTTATTGCCAGGACCAATACCTCAAGTTTCTGTTTATGGATTACCTGGGGCAAGTAGAGAAGCACAAGGAAAAATTTCACAAGATGCTGTACTTAGTCAACATAGCTTTCTACAATCTGATCCGTTACTTATTCAACAACATACTCAAATTCCAGTTAGCATTGCAACATCACAGAGCAGTCTTGGACTTTCAACCACTGGAGTACATCTAGAAAATGCTCATAACATATCCACTCATCATTCAAATGAAAACATCTCTTCCCAGAATTCAAATCAATTATCAAGAGATATGAGgATATCCCACTCACACCATCAGCAAtcacaacaacaacaacaacaacaacaacaacaacaacaacaacaacagcagcagcagcagcagcaacaacagcagcagcagcagcaacaacaacaacagCAACAGCAGCATCATCAACAACAACACCAGCAAAATCAGCAAAATATGGTTCAAGTCCAAGTTCAAGACAATTTAGTGTCTGTAATAgaagataataataaagaacaaaaGGATATTATGTCTGCTCAGCTACAAGCTGGTCAACTACAAATTTCTGAAAACCATATTGGCCAACAGACTTTAAGTGTTCAACAATTACAGCAACTTCAAGTTCAACAGGTTCTGGAAAATGTGgtGCGTTTGGAAAATTCTGTGGAAAATAACCAGAATCAGTCAAATAATGACCATCAAGATTCTCTTACAGAAACCATCCAAATAGTTAAAGATGAAAAATCCTTTCCAAATTGTAAATTAGTATCTGGTCTGTCTGGTGCCCAATTTGGGTTGCAGGAGCTTAAAGGCGGCAATATGATGGATGTCAGAACAGCAGATGGGAGCATAGTTAAAATTCAAACCAACATGCAAGAGCAAGAGCTGGTGAAAACACTTGGAAttgatattgttaataatatgtataaagTAAATGTAGATGATTTGAATCAGTTATTAGCTTATCACGAAATCTTTGGCAAACTGCAAGGTAACCAAAGCACAGACTTGTCTACCAACACTCCTACAGTACCTCAAAACTCAAGTAATCTGAACCTTGCCAATTCTAACATAATCATCGCCAAAGACGAGCAGGAGCCTTCCACAAGTAACATTACAAACGAAAACTTACCTACAGTTGTTGCCACTCATGCCTGTGATCTCTGTGGAAAAATGTTCCAGTACCGTTACCAACTAATTGTACACAGACGGTACCACACCGAAAGAAAACCGTTCACTTGTCAAGTGTGCGGAAAAGCTTTTACCAATGCACAAGAACTAACTCGACATGGAAAGTGCCATCTTGGAGGAAGCATGTTCACATGTGCTGTTTGTTTCCACGTATTTGCAAACGATGCGTCTTTAGAGAGACACATGAAACGCCATTCGACTGATAAACCATATGCTTGTAGTATTTGCTCTAAAACGTTTGCAAGAAAGGAACATTTAGATAATCATACAAGGTGCCATACTGGTGAAACTCCATACAGGTGTCAGTACTGTACCAAGACTTTTACACGGAAAGAACACATGGTAAACCATGTAAGGAAACATACAGGTGAAACTCCACATAGATGTGAAATTTGTAAGAAATCCTTTACAAGGAAAGAACATTTCATGAATCACGTTATGTGGCATACAGGAGAAACACCACATCATTGTACAATTTGtggtaaaaaatatacaagaaaggAACATTTAGCTAACCATATGAGGAGCCACACAAATGATACACCTTTCAGGTGTGAAATTTGTGGTAAATCGTTTACAAGAAAGGAACACTTTACGAATCATATAATGTGGCATACAGGGGAAACCCCTCATCGATGCGATTTCTGTTCAAAAACGTTCACTAGAAAAGAACATCTTTTAAATCACGTGAGGCAGCACACTGGAGAATCACCTCATCGATGCGGCTTCTGTGCTAAATCGTTTACAAGAAAGGAACATTTGATTAATCACGTCAGACAACATACAGGTGAAACGCCATTTAGATGTAATTTCTGTCCTAAAGCGTTTACGAGAAAAGACCATCTGGTAAATCACGTTCGACAGCACACTGGTGAATCTCCTCATAAATGTACATATTGTACAAAGTCATTTACTAGAAAGGAACATTTAAATAACCACGTACGACAACATACTGGCGAATCGCCCCACAGATGTCACTTCTGTTCAAAATCATTCACAAGGAAGGAACATCTTACAAATCATGTTAGAATTCACacaggcgAATCTCCACATAGATGTGAATTCTGTCAAAAAACTTTCACCCGCAAAGAACATTTAACCAATCATCTTCGACAACATACTGGAGAAACTCCCCATTGTTGCAATATATGCTCCAAACCTTTTACCCGAAAAGAACATCTTGTAAATCACATGAGGTCGCACACAGGAGAACGACCTTTTGCCTGCAACGAATGTGGTAAATCATTCCCACTTAAAGGGAATTTGCTTTTCCACCAAAGATCACATAATAAGGGAGCTGGTGCAGAGAGACCATTTAGATGTGATTTGTGTGAGAAAGATTTCATGTGTAAAGGTCATCTTGTATCTCACAGGAGGTCACACATGAATGATCGCCCACATGTCTGCCCAGATTGTGGTAAAGCATTTGTTGAAAAGGGGAACTTATTGCGCCATTTGAAGAAACACACCACCGAAAATGCTCAGGCACAAGCAAACGTGCCGATACCGTCACAAGcaggTACTACCTCGTCACAGAATAATCAGTCGGCGGGTACCGCAGCTAATATTCAAATTCCACAAGTTCATGTTAGTCAGGGGCAACAGCTCCAACAAGGAAGCGCTAACAATATTGGACAAACTCCTCATTTGCAAATGCATCCTTCCAGTAGTCATTCTGTTGTGCCAACAGCTAATACTAATGTTTTGACTTATTAG
Protein Sequence: MNSDNQNVLPAVHGTSNSENSSQRSPAATSVPTDLRVNTTALNAVALSNVAKYWVLTNLLPGPIPQVSVYGLPGASREAQGKISQDAVLSQHSFLQSDPLLIQQHTQIPVSIATSQSSLGLSTTGVHLENAHNISTHHSNENISSQNSNQLSRDMRISHSHHQQSQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHHQQQHQQNQQNMVQVQVQDNLVSVIEDNNKEQKDIMSAQLQAGQLQISENHIGQQTLSVQQLQQLQVQQVLENVVRLENSVENNQNQSNNDHQDSLTETIQIVKDEKSFPNCKLVSGLSGAQFGLQELKGGNMMDVRTADGSIVKIQTNMQEQELVKTLGIDIVNNMYKVNVDDLNQLLAYHEIFGKLQGNQSTDLSTNTPTVPQNSSNLNLANSNIIIAKDEQEPSTSNITNENLPTVVATHACDLCGKMFQYRYQLIVHRRYHTERKPFTCQVCGKAFTNAQELTRHGKCHLGGSMFTCAVCFHVFANDASLERHMKRHSTDKPYACSICSKTFARKEHLDNHTRCHTGETPYRCQYCTKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHFMNHVMWHTGETPHHCTICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCAKSFTRKEHLINHVRQHTGETPFRCNFCPKAFTRKDHLVNHVRQHTGESPHKCTYCTKSFTRKEHLNNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNICSKPFTRKEHLVNHMRSHTGERPFACNECGKSFPLKGNLLFHQRSHNKGAGAERPFRCDLCEKDFMCKGHLVSHRRSHMNDRPHVCPDCGKAFVEKGNLLRHLKKHTTENAQAQANVPIPSQAGTTSSQNNQSAGTAANIQIPQVHVSQGQQLQQGSANNIGQTPHLQMHPSSSHSVVPTANTNVLTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00056849;
90% Identity: -
80% Identity: -