Basic Information

Insect: Hermaeophaga mercurialis
Gene Symbol: -
Assembly: GCA_951812935.1
Location: OX638365.1:34494133-34500752[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 0.06 7 8.2 0.2 2 23 147 168 146 168 0.96

2 29 1.7 1.9e+02 3.7 2.0 2 20 188 206 187 210 0.80

3 29 8.5e-05 0.01 17.2 3.3 1 23 215 237 215 237 0.96

4 29 0.0014 0.16 13.4 1.5 1 23 273 295 273 295 0.93

5 29 5.8 6.9e+02 1.9 2.6 1 23 301 324 301 324 0.94

6 29 0.00072 0.084 14.2 1.7 1 23 333 356 333 356 0.97

7 29 0.45 53 5.4 0.1 1 23 361 383 361 383 0.90

8 29 1.1e-06 0.00013 23.0 0.9 1 23 388 410 388 410 0.98

9 29 1.3e-07 1.5e-05 26.0 4.4 2 23 417 438 416 438 0.98

10 29 0.2 23 6.6 0.1 2 23 600 621 599 621 0.96

11 29 0.00019 0.022 16.1 1.8 2 23 641 663 640 663 0.91

12 29 0.0034 0.4 12.1 0.8 1 23 668 690 668 690 0.96

13 29 2.7 3.2e+02 3.0 1.1 1 23 697 721 697 721 0.91

14 29 0.015 1.8 10.1 2.2 3 23 728 748 728 748 0.95

15 29 0.16 19 6.9 3.4 1 23 752 775 752 775 0.97

16 29 0.0018 0.22 13.0 2.1 1 23 786 809 786 809 0.96

17 29 7e-06 0.00083 20.6 0.4 1 23 814 836 814 836 0.95

18 29 1e-05 0.0012 20.1 0.7 1 23 841 863 841 863 0.99

19 29 2e-08 2.4e-06 28.6 1.3 2 23 870 891 869 891 0.98

20 29 0.012 1.4 10.4 2.1 2 23 1093 1115 1092 1115 0.91

21 29 3.8e-05 0.0044 18.3 0.8 1 23 1120 1142 1120 1142 0.97

22 29 9.5 1.1e+03 1.3 1.2 1 23 1149 1173 1149 1173 0.86

23 29 0.01 1.2 10.6 2.1 3 23 1180 1200 1178 1200 0.94

24 29 1.9 2.3e+02 3.5 3.2 1 23 1204 1227 1204 1227 0.96

25 29 0.00081 0.096 14.1 1.9 1 23 1238 1261 1238 1261 0.97

26 29 5.6e-06 0.00066 20.9 0.7 1 23 1266 1288 1266 1288 0.95

27 29 3.7e-07 4.3e-05 24.6 1.1 1 23 1293 1315 1293 1315 0.98

28 29 3.2e-06 0.00038 21.6 2.3 1 23 1321 1343 1321 1343 0.99

29 29 0.026 3 9.4 0.6 1 22 1349 1370 1349 1370 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	0.06	7	8.2	0.2	2	23	147	168	146	168	0.96
2	29	1.7	1.9e+02	3.7	2.0	2	20	188	206	187	210	0.80
3	29	8.5e-05	0.01	17.2	3.3	1	23	215	237	215	237	0.96
4	29	0.0014	0.16	13.4	1.5	1	23	273	295	273	295	0.93
5	29	5.8	6.9e+02	1.9	2.6	1	23	301	324	301	324	0.94
6	29	0.00072	0.084	14.2	1.7	1	23	333	356	333	356	0.97
7	29	0.45	53	5.4	0.1	1	23	361	383	361	383	0.90
8	29	1.1e-06	0.00013	23.0	0.9	1	23	388	410	388	410	0.98
9	29	1.3e-07	1.5e-05	26.0	4.4	2	23	417	438	416	438	0.98
10	29	0.2	23	6.6	0.1	2	23	600	621	599	621	0.96
11	29	0.00019	0.022	16.1	1.8	2	23	641	663	640	663	0.91
12	29	0.0034	0.4	12.1	0.8	1	23	668	690	668	690	0.96
13	29	2.7	3.2e+02	3.0	1.1	1	23	697	721	697	721	0.91
14	29	0.015	1.8	10.1	2.2	3	23	728	748	728	748	0.95
15	29	0.16	19	6.9	3.4	1	23	752	775	752	775	0.97
16	29	0.0018	0.22	13.0	2.1	1	23	786	809	786	809	0.96
17	29	7e-06	0.00083	20.6	0.4	1	23	814	836	814	836	0.95
18	29	1e-05	0.0012	20.1	0.7	1	23	841	863	841	863	0.99
19	29	2e-08	2.4e-06	28.6	1.3	2	23	870	891	869	891	0.98
20	29	0.012	1.4	10.4	2.1	2	23	1093	1115	1092	1115	0.91
21	29	3.8e-05	0.0044	18.3	0.8	1	23	1120	1142	1120	1142	0.97
22	29	9.5	1.1e+03	1.3	1.2	1	23	1149	1173	1149	1173	0.86
23	29	0.01	1.2	10.6	2.1	3	23	1180	1200	1178	1200	0.94
24	29	1.9	2.3e+02	3.5	3.2	1	23	1204	1227	1204	1227	0.96
25	29	0.00081	0.096	14.1	1.9	1	23	1238	1261	1238	1261	0.97
26	29	5.6e-06	0.00066	20.9	0.7	1	23	1266	1288	1266	1288	0.95
27	29	3.7e-07	4.3e-05	24.6	1.1	1	23	1293	1315	1293	1315	0.98
28	29	3.2e-06	0.00038	21.6	2.3	1	23	1321	1343	1321	1343	0.99
29	29	0.026	3	9.4	0.6	1	22	1349	1370	1349	1370	0.94

Sequence Information

Coding Sequence: ATGGCGCATATTCACCCAACACAACTTCCAGTATATCACCAACATGTGGCTTCGAGGTATCTCATGCTTCAACCAAACACGAATTTGTCAGTCCCGAATTATCAGtcgttaataaataattgtttaccaATGATGAATACTTACACGCCAGTTTTCAACAATACTTCGAGCTATCAAATGCCTTTAGTACACATTAAACAAGAGGATTCATTTagcgaaataaataaaatagtaccaGGACTATTTGATAACCAAGAATCTCTTCCAAAAATTGCACGTGTGTCTGGTAGAGCAGAATCTGATCAAACTGAAAGCGAAACGCGTGTCGGTTATATAAATCCTTTTAATTACTCATCGATGGAAACCAACGTAAGCGGAAAATACGCAAAGCAAAGAATAAAATTCACCGAACAAGAATTAGCTAGAATTGTTGGCTGGACTTGCGTGTTATGTCCTGAAGAATTTCACAGTAAAATCGAATTACTCGATCATTATGAAATGCACAAAAAACGAGCAGATCGACTAGACGacagtaaaatgaataaaatcaacgaaaatattaaatgtccTGTTTGcgatttttcttataaaactaTGATGAGCTACCAGTGCCACCTTTTCGAAAGGCATATGCCTAACGAACATTTTTGTGATATTTGTAAGAGAAAATTTACTAATTCGTATTATTTAAGCGTGCACATGGCGCGGCATAGTGAAGATCCCGAATTATTCGTTTGTGTCGTTTGTAAAGAATTTTCCTCCAGAGATACTACAGAATTTGCAGCGCATTTCAAAACGAAACACCCAACGAACACGTTTTATTGCAAAGAATGCGGAAAGAACTTCACCAGCGAAAGTTGGTTTGACGGGCACAAAATGTTCCACATTAAagatccaaaatatttttgcgGGCAGTGCAATATCTAcaaagaaaaccaaaaagatTTTAGCACGCACATGAAAAAGTTTCATACGGTAGATGTAGAAATAccgaattttaaatgtttcgatTGCGATTTAACTTTTCCCGCGGAGAAAAACCTTAACGCCCACAAACGGCACTTACACACACAACCTGATTTCCTTTGCAATATTTGTGGACGAAAATACCTCTGGCAAGGACCTTTGACCGAACACATGAAGATACACGGAGAGGGGGGGTACGTGTGCGATTTTTGCGGGAAAAAATTCAAACAAGGAAAAAATTTGTCGGTACACATGCGCATTCACACCGGAGAAAAATCGAATAAATGCGAAACGTGCGGCAAGTGTTTCACGCAAAAATCCACCCTCAATATACATATGAGGACGCACACGGGGGACAGACCGAATTACGTCCATTCTCCACATGTGATACGTATTCTCCCAACGAAACAACTTCCATTGTATCAAAATGAACCTGTTAGGAAGTATATTTTGCTGCAACCAAAAGACATGAGTTTTCCACGCCaaacttaccaaaaaataataaataacaatccTCTTCAGACGAGTAAGACTCTAGTTAGAGAATGCGTTTATTTGCCAAATTTAAACGCAAGTTATCAACTACCCTCAGCGCAAATACAACAACcagatttatttggaaaaacaCATTCTGTTGAAGAAAAAAACGTATCAGATCATCCGAATGATAAAGGAGGGTGTCAtgaaaatgattcaaaaaccGGGAAACCTACTTGTTACGAAAATCCCTTTAATTACATGTATATAAAGAGCAACATGAACAGAACTTTCGCAGAACGCAAAATAAAGCAAACTGAAAAGGAATTAAACGAAGAAGACATCGTTAATTGGACGTGCGTTTTGTGCGCCGAAGACTACAAAAGTAAACGTGAATTACTCGATCATTATGAAATGCACAAAAAAGTAAGCGACCAATTAGACAagagtaaaattattaaagttaatgaTAATATCAAATGTCCTGTTTGCGAAGAAACTTTTAAATACAAATCGCATTACCAAAACCACGTCACCGAAAAACATATGCCTAAGGAATATTTTTGCGATATTTGCGAAAagaattataacaattattattatttaagcgTGCACGTGGTGCGGCATAGTAAAGATCCCGAATTATTCGTTTGTGTCGTTTGTAAAGAATTTTCTTGCAGAGAGACCTCAGAATTGGCAACGCACATCAATTCGAAACATGGACAATATACTTCGTGGTGTAAACAATGTAAGAAGATCTTCACCAGCCAAACTTGGTTTGAATCCCACAAAATTTTCCACGATCCAAAATATTATTGCAAGATATGTAACGTGTTCAAAGACAATCAAAAGGATTTCAAAACCCACATGAAAAAATCGCATACGTTCTATTCGCAACTGGAAATTCCaaatttcaaatgtttcgaTTGCGGTTTGACTTTTCTTCGGGCGGAGAATCTCAACAATCACAATCGGCACTTGCACGAACAACCAGAATTTCTTTGCAATATCTGCGGTAGAAGATACACCACCCAAGGACCTTTGACCCAACATATGAAGATACACAGAGAAGGGGAGTACGTCTGTAATATTTGCGGAAAATTGTTCAAGCAAAGCCGAAGTTTCGGACTGCACATGCGCATTCATACCGGAGAAAAACGGAATAAATGCGAAATATGCGGTAAAAGTTTCACGCAAAAGTCAACCCTTAATGTACATTTAAGGACGCATACGGGGGAGAGACCcaACTTCGCTCGTCCTCCACATCTGGTACGTATTATTCCAATTAAACATCTTCCAAAGTACCAAAACAGACCTGTTGGGAGGTGTATCCTGCTCCAACCAAGAGGAACTGGGTTGCCACACCAAActaaccaaaaaataataaataacgatCCCCTTTCGACGACTAATACTCAAATTACACCGTGCGTTGATTTACCTCCTTTAAACACCACAAATAATCAAATTCATACAATACGAATTAAACAACCAGATCCGTTAGATACAAAAGAGGCTGCTAAAGaaaaacttgttttaaattattcgaaTGTTAAAAGAGAGTCTAATCAAAACGATTCTAAAAGTGCTAAAACTGTTGGTTATGAAAATCCTTTTAATTACACTTGTATAGAGAGCAACATGAGCAGAAGTTCTGCAGAGagcaaaataaaagaaaacgaaGTAAAAGAAGAAGACATTATTACTTGGAATTGCATTTTGTGTGCTGAAGAGTATCAAAGTAAAAGCGATGTACTCGATCATTATGAAACGCATAAAAAAGCAAGCGATCAATTagacaaaagtaaaattaataaagctgATGAAACGATCAAATGTCCTGTGTGtgaagaaacttttaaaaaccaAAGACGTTTTCACAACCACGTCACCGAAAAACATATGCCGAAAGATTATTTTTGCGATATTTGCGAAAAGAATTAtagtaacaattattatttaagcGTGCACATGGCGCGGCATAGTAACGATCTGGAATTATTCTTTTGTGTCGTTTGTAAAGAATTTTCCTCCAAAGACACTAAAAAATTAGCAACACACATCAACACAAAACACGGACAATATACTTTAGCGTGTAAACAATGTGAAAAATTCTTCACCAGCGAAACTTGGTTCAAAACCCACAAAATGTTCCACAACCCGAAATATTATTGTAAACTGTGTAAAGTGTTcaaagaaaaccaaaaagagTTTAATACCCACATGAAAAACTCGCATAAATTAAAGTCGCAACTAGAAATTCCaaatttcaaatgtttcgaTTGCGGTTTGACTTTCCTTCGAGCGGAAAATCTCAACGTTCACAAACGGCACTTGCACGATCAACCTGGATTTCTTTGCAATATCTGCGGTAGAAGATACACCACCCGAGGACCTCTGACCAAACATATGAAGATACACGGAGAAGCAGAGTACGTCTGTAGTTTTTGCGGAAAAAAGTTCAAACAAAACCAAAGTTTACAAATACATATACGCATTCATACTGGCGAAAAACCGTATAAATGCCAAACATGCAGCAAAAGTTTTAACCAACAATCCCCCTTTAAGATACATATGAGAATTCATACAGGGGAAAGACCATATCCTTGTGGAAAATGCCAAAAAGGATTTGTTACAAAAACTCTCAGAGATACTCATCAAAAAACGTgcgaaaaataa
Protein Sequence: MAHIHPTQLPVYHQHVASRYLMLQPNTNLSVPNYQSLINNCLPMMNTYTPVFNNTSSYQMPLVHIKQEDSFSEINKIVPGLFDNQESLPKIARVSGRAESDQTESETRVGYINPFNYSSMETNVSGKYAKQRIKFTEQELARIVGWTCVLCPEEFHSKIELLDHYEMHKKRADRLDDSKMNKINENIKCPVCDFSYKTMMSYQCHLFERHMPNEHFCDICKRKFTNSYYLSVHMARHSEDPELFVCVVCKEFSSRDTTEFAAHFKTKHPTNTFYCKECGKNFTSESWFDGHKMFHIKDPKYFCGQCNIYKENQKDFSTHMKKFHTVDVEIPNFKCFDCDLTFPAEKNLNAHKRHLHTQPDFLCNICGRKYLWQGPLTEHMKIHGEGGYVCDFCGKKFKQGKNLSVHMRIHTGEKSNKCETCGKCFTQKSTLNIHMRTHTGDRPNYVHSPHVIRILPTKQLPLYQNEPVRKYILLQPKDMSFPRQTYQKIINNNPLQTSKTLVRECVYLPNLNASYQLPSAQIQQPDLFGKTHSVEEKNVSDHPNDKGGCHENDSKTGKPTCYENPFNYMYIKSNMNRTFAERKIKQTEKELNEEDIVNWTCVLCAEDYKSKRELLDHYEMHKKVSDQLDKSKIIKVNDNIKCPVCEETFKYKSHYQNHVTEKHMPKEYFCDICEKNYNNYYYLSVHVVRHSKDPELFVCVVCKEFSCRETSELATHINSKHGQYTSWCKQCKKIFTSQTWFESHKIFHDPKYYCKICNVFKDNQKDFKTHMKKSHTFYSQLEIPNFKCFDCGLTFLRAENLNNHNRHLHEQPEFLCNICGRRYTTQGPLTQHMKIHREGEYVCNICGKLFKQSRSFGLHMRIHTGEKRNKCEICGKSFTQKSTLNVHLRTHTGERPNFARPPHLVRIIPIKHLPKYQNRPVGRCILLQPRGTGLPHQTNQKIINNDPLSTTNTQITPCVDLPPLNTTNNQIHTIRIKQPDPLDTKEAAKEKLVLNYSNVKRESNQNDSKSAKTVGYENPFNYTCIESNMSRSSAESKIKENEVKEEDIITWNCILCAEEYQSKSDVLDHYETHKKASDQLDKSKINKADETIKCPVCEETFKNQRRFHNHVTEKHMPKDYFCDICEKNYSNNYYLSVHMARHSNDLELFFCVVCKEFSSKDTKKLATHINTKHGQYTLACKQCEKFFTSETWFKTHKMFHNPKYYCKLCKVFKENQKEFNTHMKNSHKLKSQLEIPNFKCFDCGLTFLRAENLNVHKRHLHDQPGFLCNICGRRYTTRGPLTKHMKIHGEAEYVCSFCGKKFKQNQSLQIHIRIHTGEKPYKCQTCSKSFNQQSPFKIHMRIHTGERPYPCGKCQKGFVTKTLRDTHQKTCEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -