Basic Information

Insect: Hermaeophaga mercurialis
Gene Symbol: -
Assembly: GCA_951812935.1
Location: OX638363.1:9341310-9354061[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.0045 0.53 11.7 2.3 1 23 106 128 106 128 0.97

2 25 3 3.5e+02 2.9 0.1 1 19 134 152 134 157 0.89

3 25 0.015 1.8 10.1 0.1 2 23 165 188 164 188 0.95

4 25 0.62 73 5.0 0.1 1 23 194 216 194 216 0.96

5 25 0.00079 0.093 14.1 1.5 2 23 227 248 226 248 0.95

6 25 2.9e-05 0.0035 18.6 1.0 1 23 269 291 269 291 0.93

7 25 3.9e-06 0.00045 21.4 3.0 1 23 297 319 297 319 0.98

8 25 3e-05 0.0035 18.6 0.3 1 23 325 348 325 348 0.96

9 25 0.006 0.71 11.3 2.6 1 23 358 381 358 381 0.96

10 25 2.4e-07 2.9e-05 25.2 2.3 1 23 438 460 438 460 0.99

11 25 2.1e-05 0.0025 19.0 1.8 1 23 466 488 466 488 0.98

12 25 0.0012 0.14 13.5 0.6 2 23 495 516 494 516 0.97

13 25 4.5e-06 0.00054 21.2 0.7 1 23 594 616 594 616 0.98

14 25 0.00015 0.018 16.4 1.2 1 23 622 644 622 644 0.97

15 25 1.5e-07 1.8e-05 25.8 1.3 1 23 650 672 650 672 0.98

16 25 0.008 0.95 10.9 2.8 1 23 678 701 678 701 0.97

17 25 2e-06 0.00024 22.3 1.6 2 23 940 961 939 961 0.97

18 25 0.0058 0.68 11.4 0.4 2 23 965 986 964 986 0.98

19 25 1e-06 0.00012 23.2 2.1 1 23 995 1017 995 1017 0.99

20 25 0.021 2.4 9.7 2.4 3 23 1025 1045 1023 1045 0.97

21 25 8.6e-05 0.01 17.1 0.6 3 23 1054 1074 1052 1074 0.97

22 25 0.019 2.3 9.7 1.9 1 23 1080 1103 1080 1103 0.95

23 25 0.0029 0.34 12.3 0.9 1 23 1260 1283 1260 1283 0.96

24 25 0.11 13 7.3 0.8 1 19 1298 1316 1298 1321 0.89

25 25 0.35 41 5.8 1.3 3 23 1325 1346 1323 1346 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.0045	0.53	11.7	2.3	1	23	106	128	106	128	0.97
2	25	3	3.5e+02	2.9	0.1	1	19	134	152	134	157	0.89
3	25	0.015	1.8	10.1	0.1	2	23	165	188	164	188	0.95
4	25	0.62	73	5.0	0.1	1	23	194	216	194	216	0.96
5	25	0.00079	0.093	14.1	1.5	2	23	227	248	226	248	0.95
6	25	2.9e-05	0.0035	18.6	1.0	1	23	269	291	269	291	0.93
7	25	3.9e-06	0.00045	21.4	3.0	1	23	297	319	297	319	0.98
8	25	3e-05	0.0035	18.6	0.3	1	23	325	348	325	348	0.96
9	25	0.006	0.71	11.3	2.6	1	23	358	381	358	381	0.96
10	25	2.4e-07	2.9e-05	25.2	2.3	1	23	438	460	438	460	0.99
11	25	2.1e-05	0.0025	19.0	1.8	1	23	466	488	466	488	0.98
12	25	0.0012	0.14	13.5	0.6	2	23	495	516	494	516	0.97
13	25	4.5e-06	0.00054	21.2	0.7	1	23	594	616	594	616	0.98
14	25	0.00015	0.018	16.4	1.2	1	23	622	644	622	644	0.97
15	25	1.5e-07	1.8e-05	25.8	1.3	1	23	650	672	650	672	0.98
16	25	0.008	0.95	10.9	2.8	1	23	678	701	678	701	0.97
17	25	2e-06	0.00024	22.3	1.6	2	23	940	961	939	961	0.97
18	25	0.0058	0.68	11.4	0.4	2	23	965	986	964	986	0.98
19	25	1e-06	0.00012	23.2	2.1	1	23	995	1017	995	1017	0.99
20	25	0.021	2.4	9.7	2.4	3	23	1025	1045	1023	1045	0.97
21	25	8.6e-05	0.01	17.1	0.6	3	23	1054	1074	1052	1074	0.97
22	25	0.019	2.3	9.7	1.9	1	23	1080	1103	1080	1103	0.95
23	25	0.0029	0.34	12.3	0.9	1	23	1260	1283	1260	1283	0.96
24	25	0.11	13	7.3	0.8	1	19	1298	1316	1298	1321	0.89
25	25	0.35	41	5.8	1.3	3	23	1325	1346	1323	1346	0.95

Sequence Information

Coding Sequence: atgttaacgaCTAGTCAAATGAATCCTATTATGGAAGAAAACAACATATCTACTTATTTGCTTATACCTTTTGATTCTGTTAAAAATCCAGATGAATTTGCTCAGCTTAGTGTCCTTCCAGATGGTACCTTATACGTTATCAACCAAAAggttgaaaataaacaagaattgctgccattaaaaaatgaaattgtagaGGATGGATCTGATGTAATAAGcgCGCAAAAACAAGCACCATCGTCAGATAAccagttaattaaaaaattaggaaataaaaatgtaaaacagaTTTTACCATCACCATCAGAAGTCAAAtacaattgttcaaaatgcaataatagttttaaatccgtaaaagaatataaagatCATTTAAAGTGGCACAAATcccaaaaaaagtttaattgtcCAAATTGTGCAACTGgttataatattgaaaataacttGACGATTCATAATGTTTTGGTTCATTCCAATGATAATGATTTAAGTAGTTGTCCCATTTGTGGGATTAGTTTGAAATTCCAAAGGGCCGCTAGTCTAAAATCCCATTTAATGATCCATTTGGTTGAGGAATTGCACATTTGTGATGTGTGCCAGGCTGAAATCGAAAAAGAGgaaGATTATGCCCAGCACATGTTGACACATgcatcaaaaaataaagattatcaatctttaaaatgtttgcattgTGATATAGAATTTAAGACTAGACAAGAGTTGAAATTACACATTTCTGATCACACTAAGGCTTGGAggtatttcagaaaaaaaaaaggtagGAAACCTACTATAGAGAAGAAATTTAACTgtgaaaaatgtgataaaagttttattaaacaatCATTGTTGGAGAGACATGACAGAATACATAGTGGAGAAAAACCGTTTAAGTGTATGATTTGTGATCAATGTTTTACTCAAAAAGGGACCTTACAAATTCATATGTTGAAGCATTCAGGAAAGAAACCCTTTGCTTGTACCTTATGTCCTGCCAGATTTAATCAGAAAGgAAATCTTAGAGTTCATATTAACAAAACACACACTGCTCCCGATGGTGGACAAAAATCTTTCAAATGTCCTCATTGCTCTTGCATTTTCAAACGAATCGCCTCTCTGAACGGCCACGTTACTAAAGCTCATGTCCGCGATACTTTAGGCGACGAAAACATCATCGGTAATGTCATGCAAAACCTGCAGCATCTACAGGAGCAATCTTTCGATTCGTACGTCACTTTGACTGAATCGGCTCCAGATGGCACAGAGAAAAAAATCGTAGTTCAAATGAAGAAGGTCGGGGACATGAGATTGTACAAGTGTTCTTATTGCCCAAAAACGTGCAAAAAACCTTCGGATTTAATTCGGCATATCAGGGTTCATACCAGAGAAAGACCGTTCATGTGTAAAATTTGCAGGAAATCCTTTTCcatcaaattttcattaatgGTCCACATAAAAACACACTCTAATGAAAGAAATGTCAAATGTAAGAGCTGCGATTTGGTTTTTGgctccaaaaaattattaaatatacatttgagtaaacacGATAACGAAAAATTGTCGAAATGGCAGTGCACGACTTGTGGCGCTTTATTTGATGAGTTCGAAAAGGCTTTGCAACACAAAATGGCTCAAGATCAACCTCATACTATTCAGTCTGTTATTAATAAAGTTATGAAACAGCCTTTATATCAAACTGTTTATGGTAATTTGACATTTAAGCCGCCTCGCCCGAAAATTCCAAATACAGGAAGTGAACTTTCAGTATTAAGGCCTTATCCTTGTACAGTGTGTGATGCCAGATTTACTACCAAAATAAATCTGAGGCGTCATGTTAAAAATCACGAAAATGACAGAAGATTTAAATGCCAAATGTGTCCTaaggcttttattacatcttatagattaaaagaaCACGTGAATTTtcacaataacataaaaaattacgCTTGTAAAACATGTGGAAAAAGATTTGGAACTTCAACGAACTTAAGGAGGCACATGATCACTCACAGCAATCAAAGACCATACATGTGTCCTTATTGCTCAAAACATTTTCAGACTCTGGAATTGAGCCGACGCCATATTAAGAGAGTACATAAAAATGACGTTTTACCCAAAAtcGAGAGTGATGCTGAAAATTTGAAGTTTACTACTAACATTTTGAATGAGGCTACATCTGTCATAATTAGCAATAAAGTCGCTATTGAAGGATCAAACCTGCAAAATTATCAATCGGAAACACTACAAAAACCAACTCCCCAACTGAACTCCAATCCACTCCAAGACCCGAACGCGACCTTACAGACAATCTACGTGAACCTCGAAGATCTGCAACTGATCAGCAACCCCGACTTAAACCTAACAACGCTGGTTGACAACGGACCCCAAGAAACCTTCGAAACCAAGTCCCAAATCCTACCGATTTTCGACGGGAACGTGGTAGTTCAATCGCCTCACGATCTAAACCCAACCCAAAACATCTTCGATGCCGTAGTTCAAACGTCCTCCGTGTCAAACGAAGTTCGAAACATCTACGACACGTCCACTGAGTCGAATGAAGACAGTACCATTTACGACGTGGTGGGTCCACCGACCGCCACGTCGAACGAAGCCCGAACCATCTACGACGACGCAAACATCATATGCATGAATTGCAACGGAATGTTTTTGTGTTTCGTGGACTTTCAGAAGCACCAATGCCGTGACGACAAAAAGCGGTCTTTAGAGCCGGCACAGACGGCCCTCGAGACAGAGAAGGAAGAGCAGTTACCGAAGGCGAAGGCGCTCCAGTTACCGAAGGCGAAGGCGCTCCAGTGTCCTGTATGCGAAAAGAGCTTCAAGAAGAGAATCTCCTATAGGAACCACATGCGGACGCACTCGTCCAACCAGTGTCCGAGAtgcaatttgaattttaacaataagcTAGATTATTTAGAGCACATTGAAACGCATGGAGTGGACGACGTCGGTAATTTGTATCAATGTATGTTTTGTTTGAAGAGTTTTAAGAAACCCTCAGATttgaatcgTCACATTCGCACGCACACTGGAGAAAAACCATTCGGCTGCGTCATCTGCGATAAAAAATTTGCTTTGAAATCTACGCTCAAGTGTCATGTGAAGACCCATAATCCGAATAACAAACAATTCGGATGCGAAGTTTGCAACACTTTCTATTCCTCCAAAAGCAGTCTCAAGGTTCACATGACCATACACACAGgtcAAACTCCTTATTCGTGTTCCATTTGCGGCGCCAAATTTCGGACGTTAGGTTGCAAAAAATCCCACGAAAACTCGGAACATCGTCGTACGCCAAAAAAGAAGGCAAAGAAAACACTGACCGacaatttaagtaatttattgtcAAACATGGAAATGAACAAACTAGACCAATTGACGGATAGTGTCAATGTACCACTCGAAAGTTTGGGTCTGACCATGGATGAGAACAATCTTCCCGTAAGTTCTCATACCTTGGACCTCCCTTCACAAATTGTGAATCTGGAAGTTCCTCATCCGGACTCAATTCTGGCGACGATTCCCGAAGATCCGTCAAATCTGTTGCAACAACTCCAGATGGTGCTGAGGACCAACGAGGTCGAGACGGAGGCAGTTCCGTCGCTCGTTTTGGACGACGTAGGTTTTTTGGACCTGAATTCCTCAGCCAATAATTTTCAGATCGTTTCCTTGCCCGAGGAGGGTGGCGGAGTTACGATCAGCATCAGAGAGGATCAGAATCAAGTTAATGCAGGAAAAGAAAAAACGAAACCATTTGAATGCGACTCGTGCTTAAGAACTTACGCGTCAAAAGACGGTCTGAGGAAACACAAGAAAAACGTGCATGGTGGCGGCGAAAAGAAGAAAGTGGTAAAGGAAAAAACAATATTCGAATGTGAAAGGTGTGAAGGCAAATTCGATAGCAAGGAAAAGCTGATAAGGCACGATAAAAAAGAACACCAATGTCTGTGCACATTATGCGACATCAAATTTAACGAAATAAACAGTTACATCGACCACATGGAAAGatttcattCGGAAAAAGAACAAAACACTGCCTTGTTAAATCTAAAATTGGATTTAGCGAGTGCGACGATGGAACCACTTTTCAGcagtttattttcattaaaaaaaatataa
Protein Sequence: MLTTSQMNPIMEENNISTYLLIPFDSVKNPDEFAQLSVLPDGTLYVINQKVENKQELLPLKNEIVEDGSDVISAQKQAPSSDNQLIKKLGNKNVKQILPSPSEVKYNCSKCNNSFKSVKEYKDHLKWHKSQKKFNCPNCATGYNIENNLTIHNVLVHSNDNDLSSCPICGISLKFQRAASLKSHLMIHLVEELHICDVCQAEIEKEEDYAQHMLTHASKNKDYQSLKCLHCDIEFKTRQELKLHISDHTKAWRYFRKKKGRKPTIEKKFNCEKCDKSFIKQSLLERHDRIHSGEKPFKCMICDQCFTQKGTLQIHMLKHSGKKPFACTLCPARFNQKGNLRVHINKTHTAPDGGQKSFKCPHCSCIFKRIASLNGHVTKAHVRDTLGDENIIGNVMQNLQHLQEQSFDSYVTLTESAPDGTEKKIVVQMKKVGDMRLYKCSYCPKTCKKPSDLIRHIRVHTRERPFMCKICRKSFSIKFSLMVHIKTHSNERNVKCKSCDLVFGSKKLLNIHLSKHDNEKLSKWQCTTCGALFDEFEKALQHKMAQDQPHTIQSVINKVMKQPLYQTVYGNLTFKPPRPKIPNTGSELSVLRPYPCTVCDARFTTKINLRRHVKNHENDRRFKCQMCPKAFITSYRLKEHVNFHNNIKNYACKTCGKRFGTSTNLRRHMITHSNQRPYMCPYCSKHFQTLELSRRHIKRVHKNDVLPKIESDAENLKFTTNILNEATSVIISNKVAIEGSNLQNYQSETLQKPTPQLNSNPLQDPNATLQTIYVNLEDLQLISNPDLNLTTLVDNGPQETFETKSQILPIFDGNVVVQSPHDLNPTQNIFDAVVQTSSVSNEVRNIYDTSTESNEDSTIYDVVGPPTATSNEARTIYDDANIICMNCNGMFLCFVDFQKHQCRDDKKRSLEPAQTALETEKEEQLPKAKALQLPKAKALQCPVCEKSFKKRISYRNHMRTHSSNQCPRCNLNFNNKLDYLEHIETHGVDDVGNLYQCMFCLKSFKKPSDLNRHIRTHTGEKPFGCVICDKKFALKSTLKCHVKTHNPNNKQFGCEVCNTFYSSKSSLKVHMTIHTGQTPYSCSICGAKFRTLGCKKSHENSEHRRTPKKKAKKTLTDNLSNLLSNMEMNKLDQLTDSVNVPLESLGLTMDENNLPVSSHTLDLPSQIVNLEVPHPDSILATIPEDPSNLLQQLQMVLRTNEVETEAVPSLVLDDVGFLDLNSSANNFQIVSLPEEGGGVTISIREDQNQVNAGKEKTKPFECDSCLRTYASKDGLRKHKKNVHGGGEKKKVVKEKTIFECERCEGKFDSKEKLIRHDKKEHQCLCTLCDIKFNEINSYIDHMERFHSEKEQNTALLNLKLDLASATMEPLFSSLFSLKKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -