Basic Information

Insect: Hermaeophaga mercurialis
Gene Symbol: -
Assembly: GCA_951812935.1
Location: OX638365.1:34556835-34569717[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 43 0.51 61 5.3 0.9 2 23 71 92 70 92 0.88

2 43 1.4 1.7e+02 3.9 6.6 1 20 126 145 126 148 0.80

3 43 0.00035 0.041 15.2 2.5 1 23 154 177 154 177 0.97

4 43 0.0015 0.17 13.3 0.7 1 23 189 212 189 212 0.95

5 43 0.094 11 7.6 1.0 3 23 223 243 221 243 0.96

6 43 0.00017 0.02 16.2 0.2 1 23 249 271 249 271 0.98

7 43 0.009 1.1 10.8 1.1 1 14 277 290 277 294 0.87

8 43 0.015 1.8 10.1 0.5 2 23 345 366 344 366 0.93

9 43 0.003 0.35 12.3 3.1 1 23 372 394 372 394 0.98

10 43 7.1e-05 0.0084 17.4 1.0 1 23 400 422 400 422 0.97

11 43 2.1 2.5e+02 3.3 6.3 1 23 427 450 427 450 0.93

12 43 0.00054 0.063 14.6 1.2 1 23 458 481 458 481 0.97

13 43 0.00029 0.034 15.5 2.6 3 23 490 510 489 510 0.98

14 43 0.00018 0.022 16.1 0.2 1 23 516 538 516 538 0.98

15 43 0.01 1.2 10.6 0.8 1 14 544 557 544 561 0.86

16 43 0.086 10 7.7 0.1 2 23 632 653 631 653 0.94

17 43 0.022 2.6 9.5 5.2 1 23 659 681 659 681 0.98

18 43 0.0009 0.11 13.9 0.3 1 23 687 709 687 709 0.98

19 43 8.3e-05 0.0098 17.2 5.3 1 23 715 738 715 738 0.98

20 43 0.012 1.4 10.4 2.3 1 23 744 767 744 767 0.89

21 43 0.019 2.2 9.8 1.7 3 23 776 796 774 796 0.97

22 43 1.3e-06 0.00015 22.9 0.3 1 23 801 823 801 823 0.98

23 43 4.1e-05 0.0048 18.2 3.5 1 23 829 851 829 851 0.98

24 43 0.004 0.47 11.9 1.1 1 20 857 876 857 881 0.91

25 43 1.1 1.3e+02 4.3 0.4 2 16 961 975 960 982 0.84

26 43 0.27 32 6.1 1.3 1 23 988 1010 988 1010 0.97

27 43 1.2 1.4e+02 4.1 2.3 1 23 1016 1038 1016 1038 0.84

28 43 0.0015 0.18 13.2 0.7 1 23 1044 1067 1044 1067 0.90

29 43 0.002 0.24 12.8 4.9 1 23 1079 1101 1079 1102 0.92

30 43 0.0023 0.28 12.6 0.5 2 23 1111 1132 1110 1132 0.97

31 43 4e-06 0.00047 21.3 0.8 1 23 1138 1160 1138 1160 0.95

32 43 1.8 2.2e+02 3.5 0.5 2 16 1194 1208 1193 1215 0.80

33 43 0.031 3.6 9.1 0.4 1 23 1249 1271 1249 1271 0.98

34 43 0.0051 0.6 11.6 1.5 1 23 1365 1387 1365 1387 0.97

35 43 0.0095 1.1 10.7 0.1 2 23 1440 1461 1439 1461 0.96

36 43 0.22 26 6.4 1.8 1 23 1467 1489 1467 1489 0.98

37 43 0.24 29 6.3 1.6 1 23 1495 1517 1495 1517 0.87

38 43 1.3 1.6e+02 4.0 3.4 1 23 1523 1546 1523 1546 0.94

39 43 0.0021 0.25 12.8 0.5 2 23 1556 1578 1555 1578 0.91

40 43 0.074 8.7 7.9 0.4 3 23 1585 1605 1584 1605 0.94

41 43 2.1e-05 0.0025 19.1 1.3 1 23 1611 1634 1611 1634 0.93

42 43 5.5e-05 0.0065 17.8 2.4 1 23 1641 1663 1641 1663 0.98

43 43 1.2e-06 0.00014 23.0 0.4 1 23 1669 1691 1669 1691 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	43	0.51	61	5.3	0.9	2	23	71	92	70	92	0.88
2	43	1.4	1.7e+02	3.9	6.6	1	20	126	145	126	148	0.80
3	43	0.00035	0.041	15.2	2.5	1	23	154	177	154	177	0.97
4	43	0.0015	0.17	13.3	0.7	1	23	189	212	189	212	0.95
5	43	0.094	11	7.6	1.0	3	23	223	243	221	243	0.96
6	43	0.00017	0.02	16.2	0.2	1	23	249	271	249	271	0.98
7	43	0.009	1.1	10.8	1.1	1	14	277	290	277	294	0.87
8	43	0.015	1.8	10.1	0.5	2	23	345	366	344	366	0.93
9	43	0.003	0.35	12.3	3.1	1	23	372	394	372	394	0.98
10	43	7.1e-05	0.0084	17.4	1.0	1	23	400	422	400	422	0.97
11	43	2.1	2.5e+02	3.3	6.3	1	23	427	450	427	450	0.93
12	43	0.00054	0.063	14.6	1.2	1	23	458	481	458	481	0.97
13	43	0.00029	0.034	15.5	2.6	3	23	490	510	489	510	0.98
14	43	0.00018	0.022	16.1	0.2	1	23	516	538	516	538	0.98
15	43	0.01	1.2	10.6	0.8	1	14	544	557	544	561	0.86
16	43	0.086	10	7.7	0.1	2	23	632	653	631	653	0.94
17	43	0.022	2.6	9.5	5.2	1	23	659	681	659	681	0.98
18	43	0.0009	0.11	13.9	0.3	1	23	687	709	687	709	0.98
19	43	8.3e-05	0.0098	17.2	5.3	1	23	715	738	715	738	0.98
20	43	0.012	1.4	10.4	2.3	1	23	744	767	744	767	0.89
21	43	0.019	2.2	9.8	1.7	3	23	776	796	774	796	0.97
22	43	1.3e-06	0.00015	22.9	0.3	1	23	801	823	801	823	0.98
23	43	4.1e-05	0.0048	18.2	3.5	1	23	829	851	829	851	0.98
24	43	0.004	0.47	11.9	1.1	1	20	857	876	857	881	0.91
25	43	1.1	1.3e+02	4.3	0.4	2	16	961	975	960	982	0.84
26	43	0.27	32	6.1	1.3	1	23	988	1010	988	1010	0.97
27	43	1.2	1.4e+02	4.1	2.3	1	23	1016	1038	1016	1038	0.84
28	43	0.0015	0.18	13.2	0.7	1	23	1044	1067	1044	1067	0.90
29	43	0.002	0.24	12.8	4.9	1	23	1079	1101	1079	1102	0.92
30	43	0.0023	0.28	12.6	0.5	2	23	1111	1132	1110	1132	0.97
31	43	4e-06	0.00047	21.3	0.8	1	23	1138	1160	1138	1160	0.95
32	43	1.8	2.2e+02	3.5	0.5	2	16	1194	1208	1193	1215	0.80
33	43	0.031	3.6	9.1	0.4	1	23	1249	1271	1249	1271	0.98
34	43	0.0051	0.6	11.6	1.5	1	23	1365	1387	1365	1387	0.97
35	43	0.0095	1.1	10.7	0.1	2	23	1440	1461	1439	1461	0.96
36	43	0.22	26	6.4	1.8	1	23	1467	1489	1467	1489	0.98
37	43	0.24	29	6.3	1.6	1	23	1495	1517	1495	1517	0.87
38	43	1.3	1.6e+02	4.0	3.4	1	23	1523	1546	1523	1546	0.94
39	43	0.0021	0.25	12.8	0.5	2	23	1556	1578	1555	1578	0.91
40	43	0.074	8.7	7.9	0.4	3	23	1585	1605	1584	1605	0.94
41	43	2.1e-05	0.0025	19.1	1.3	1	23	1611	1634	1611	1634	0.93
42	43	5.5e-05	0.0065	17.8	2.4	1	23	1641	1663	1641	1663	0.98
43	43	1.2e-06	0.00014	23.0	0.4	1	23	1669	1691	1669	1691	0.98

Sequence Information

Coding Sequence: ATGGCGTCTATCAAAAAAGAAACCAAGTCCAAGAAAACGGTCCccaaaaaagaaggaaaatcAAGAATAAAAAGGGACCTTAAAGAAAAACCACAAATTGAATCCAACGACGAAAAAGATCTGAATAAACCGAAACGAGAAGGCAAAAAACGAGGGCGGTACCGTCAAACGTCGCCGCTCCCCGAACCGGTGAAACTAGAGGAACCGCTCGTGTGCGATCAGTGCAAAAAAGAATTCCACACGAACTTAGAATTCGCGATGCATTCCATAGATCACAGCGCCGAATCGAAGTACTCCTGTCACTTGTGCAACTTCAAGAACCTTTGCAAATATCGATTCGAAACGCACGTTCGACTTCACGACGGCAGCACCAAGCACAAGTGCAAAATTTGCGGGAAAGCGTTCAGGTGCAACACGCACGCCGAGGAGCACAAATACTTTCACACCGGTGAGCGGCCGTTCCAGTGCGAAATATGCGGCAAACATTTCATGTACTCTAGAAGATTGGCGAACCACCGCAGGAACATCCATTACCAAACTATCACCGGCAAACCAAGGGTGAAATTCGACTGCGAATATTGCGACAAAAAGTTCGATTCCATCGCCGGTCTGACCAGTCACAGTAATAAAAAGCATCTTAACATTGTTAACGATATATCGGTAATTTGCGAAATTTGTGGCAAGAGAATCTCATGTAAAGGCAGGTTGAAGTACCACCTTCGGGTACACAGCGGAGACAAACCTTTTTCTTGTATGGTGTGCCCCAAAAAATTCGCAATGAAAGATTTATTGATAGAACATACGCGAGTGCACACCGGTGAGAAACCGTACGTTTGTAAATATTGTGGCAAAACTTTCGGCCACCGATCACCCTACAGgaaTTTAGAAAACTGTGTTAGAacaacaattattaataaagaaattcgCGAAACATCCactgaaaaattgttaaatcttTCAAATAAGAAACTTTTATCTAATCGAAAAATAAGAAGACCTATAAACGAATCAATAGAATTAGAAGAACCAGTTCGATGTTCCATATGCACTCAATCATTCAAAACTAACATATCCTTTGCACTACATTCGATAAACCATTCCAAGGAGAAATCGTACATTTGCCACATTTGTAATATAcacataaaattcaaatatctctTAGAAGTCCACATCAGGAAACACGAAAGTTGCCCGAAATACAAATGCAACTCGTGCGAAAAATCGTTTTACACTAAAGGCGAACTTACAGAACACGAAAACGAACACAACGGCGTCTACCATCCGTGCGAATTTTGCGGGAAAAAATTttactctttaaaaaaaatgtcgtgCCATCGGCGTAGGGTTCACACCAAAACCAAATCTAATAATTACCCTTGcactaaatgtaaaaaaaccTATCAAACATTCAGCGGTTTATACGCTCATATAAAAAACATCCACGAAAAAGTGGACAAAACGGCTCTTTGCGATATTTGCGGCACCAAATGCTACAGCAAAGATAAATTGAACGCCCACATGAAAAAACATACAGGGATTGGCCTTTACGCTTGCCTTATCTGTCCTAAACAATTCACAACTAAATCGATTTACGCGGCGCACATGCGCATTCACACCAACGAAAAACCTTACACTTGTCAATATTGCGGAAAGGGATTTAAACAGTCCGCCCCTTACAGGCGACGTAAAGTAAGAAGGAAACGTATACcgaaaaataaggaaaacaaGGAATCACTGAAACACAAAAAGGAAAATGTGCCCGACGAACAAAAGGAAAAACCACGCAAACTAAGAAAAGAGAGAGCACCTAAAGTAAAACgattaaagaaagaaaaggaCGAAAAAGTCCGCAAAAGAAAAATCAACGAACCCCCGATCCTAGATGAAGATATTCAGTGCGGCAAGTGCGAGGAATCCTTCAATACGAATCTCGGTTTCGCGATTCACTCGATCCGTCATCGCGAGGACTTACTCTACCATTGTCATCTGTGCGACACGACCCTTAAAACCAAGTACACCATAGAAACCCACGTGAGAAGCCACGACGGGTGTTTGCGCTACAAGTGCGACATCTGCGGCGACTATTTCAACGTCAAAAGCGAACTGCGGGACCACGAAAACTCCCATACCGGATCTAGTCCTTACCAGTGCGAGGTGTGCGGCAAACACTTCGATTTCCAAAAGCATCTCTCCTCGCATCGGAGAAGCCTTCACGCCAAATCCAAGTCGTACGATTGTAAAATCTGCAACATCACCTACAAATTCCCATCGGGCCTCTATCGCCACAACCATTTGAAGCACAAAAACATCGACGCCTCGGTTATATGTGACATTTGCGGCAAAAGACTCTCCTGCAGGGAGAAACTCAAGTCCCATCAGAAAATCCACTTGGGCCAGGTGTTCCCTTGTCTGGTGTGCAACAAACCGTTCACGAGGGAGATCCAATTGCGAGTCCACATGAGGACGCACACCGGTGAGAAACCGTACGTGTGTAAATATTGCGGGAAGGCGTTTAAACAGCACTCGCCTTATCGGTACCACATCAAGAACCACATCGGTTTACGACCGCACGTTTGCGGCTATTGCGGCAAATCGTTTATCGCGAAAAGTGCTTGGAGGATCCATACGGCCGGGTGTAAACATAAAAGTGCTTTTTCGCCGGCGCTGGACGCCGCCTCTAAACCCGACGAACCGAAGGATCATTTTCCTCACACCGGTGTGGTAGACAACGCGATATTTGGAGTAATTAAAGAGGAtaaGCCGAAGAAAAAACGAACTAAGGATAGAAAGAAAAAACGagagaaatattattttccagAAATAAACTTGGAAGAACGTAAATCGTACGAGGTGAACCCCAAAACTTTCGACGTACCCGTCAAATGCGACATTTGTTCCATCCAATTCACAAACAACCTAAACTTGGGATTTCATTCGAAAGAACACACTCCAAAAAATCTATACAGCTGTCATTTGTGcgacttcaaaataaaaaaacgagaaCCCTTCGAAATTCACGTTCGGGCACACGAAGGCTTAAAAAGATTCCAATGTCCAACATGTCATCAACAATTCATAAAACTCCGAGACGCGTACGAACACAAATTTTTGCACGACGGCGAAACGCCTTTCGAATGCGATATTTGCGGCAAAAAATTCTTCAGATCGGGTTCTGTAGTGAGCCACAAGTATTACGCGCATTCCGACGTGCTTACCGGacacaaaaataacaaattcgaGTGCAATATATGTAATAAACATTACACTACGAACTCCGGACTAACGGAGCACAATTTTTACCACCACCATCGAGAAGTGGACAAATCTCTTATGTGCGATATGTGCGGGAAAAACTTCTTGAATCCGGGAAGGCTGAAAGAACACAAACGCACGCACACCGGTGAGCGACCTTATTCCTGCACCTGGTGTTCGAAAAGTTTCCCTCGAAAAAGCAACCTCAGAAATCACGAAGTGGTACACACCGGGGAGAAAAGtttaaaaaacgGCCAAGGCGTTAAAAGTGAACTGGAAGATTTATCTTTGTACTTAGTTAAACCGACCGAATTATCAGAACCACTGAAATGCCGTCTTTGCGACGCTTCTTTTACAAACAACTTGGACTTCGGATTCCACTCAAGACTGCACAATATGGAAAAGCTTTTCGAATGTCACTTGTGCGATTTCACGGAAAGACAGAAAACAAGATTCGAATATCACATGTACCATCACGAGGGTACCAGGAAGTACAGGTGCCCCATTTGCCAAAAATATCTCGAATCTATCGACAaagttattaaacataaaaaggtACATTTAGGCGTGAAGAACATAACGgtgaaaataaaagatatgCTGTCTCCGGAagaattttcatcttttttagtTCCAATGAAAGAACTGGATGAGCCTTTGAGATGTGCAACGTGTTTCCAAAATTTTACCAACAATTTGGATTACGGTTTCCACTTAGCAGAACACAAGAAACTTCGGATTTACAATTGTCATCTCTGCGATTACGTAACGAACCCGTCAATGCGTAACGGTAAAGAACAGTTTGAGAAGCATATAAGAAACCACGAGGGTTCTAAGAAGTATAAATGCCCGATTTGTAGCAAACATTACACCAATATTCGAGACGCTATTAAACACAAATCCATACATTTACAGAGCGTGAACTTATTAACAACGAAGTACAATTCAACTGACGGAAAAAGCAATATTGCCCTAACTACCAGGGAGTTAAAGTTTCTCACTAAATACAACATCGACAACCCGGATATGTATTACATTCCTCCGATTCCGTTAGAAACGCCGATAGAATGCGACCAATGCGACGCCTCTTACAACAACAACGTCGATTTAGCGATGCATTCACGGGAGCACAACTCGGACAGATCGTACATTTGCCACATTTGCGCTTACAAAGACTCTAACCAGACTAATTTCGAGCTGCACGTCAGAAGACACGAGGGAatcaaaaaattcaaatgtcCGATGTGCCAAAAACAATTCGGCAACTTTCAAAGGGCTTTCGAACACAAGAACGTACACGAAGGGACGAAACCGTTCGAGTGCGAATTGTGCTGCAAAAGTTATTCCGGGTCGCACGATTTATATTTGCACAAAAAAGGGGTGCACTGCGACGAGAATTCGTCTAAAGAACAAACGTGCGATATTTGCAATAAAACGGTGAGTAATAGTTTGGCTTTAAGGCGGCATGTATATTACACCCATTCGAAAAAAGATATACTGTGCGATATCTGCGGGAAGGCGTTTCTACATCAGGCCGCTATGAAGGAGCACAGAGTCAATCATTTTCAAGAAAAGTCTTTCGTGTGCGATCAGTGTCCGAAGAGTTACAAAACGAAGAGGCAATTGAGACGACACGAACTGTTAAGCCACACGTCCAAAGAGAAACGTTATACGTGTAAAGACTGCGGTAAACAGTTTAGATTCACTTCGGCTTATAATTACCATCTAAAAATACATACCGGCGAAAAACCCTACAGTTGTCTTATTTGCGACAAAAAGTTCATTTCAGCGGGAAATCTTAGACTCCACATGAAGAGCCACAACACGCACGTGGCTGTAAAAGTTAACCACGTTCAAGATTAA
Protein Sequence: MASIKKETKSKKTVPKKEGKSRIKRDLKEKPQIESNDEKDLNKPKREGKKRGRYRQTSPLPEPVKLEEPLVCDQCKKEFHTNLEFAMHSIDHSAESKYSCHLCNFKNLCKYRFETHVRLHDGSTKHKCKICGKAFRCNTHAEEHKYFHTGERPFQCEICGKHFMYSRRLANHRRNIHYQTITGKPRVKFDCEYCDKKFDSIAGLTSHSNKKHLNIVNDISVICEICGKRISCKGRLKYHLRVHSGDKPFSCMVCPKKFAMKDLLIEHTRVHTGEKPYVCKYCGKTFGHRSPYRNLENCVRTTIINKEIRETSTEKLLNLSNKKLLSNRKIRRPINESIELEEPVRCSICTQSFKTNISFALHSINHSKEKSYICHICNIHIKFKYLLEVHIRKHESCPKYKCNSCEKSFYTKGELTEHENEHNGVYHPCEFCGKKFYSLKKMSCHRRRVHTKTKSNNYPCTKCKKTYQTFSGLYAHIKNIHEKVDKTALCDICGTKCYSKDKLNAHMKKHTGIGLYACLICPKQFTTKSIYAAHMRIHTNEKPYTCQYCGKGFKQSAPYRRRKVRRKRIPKNKENKESLKHKKENVPDEQKEKPRKLRKERAPKVKRLKKEKDEKVRKRKINEPPILDEDIQCGKCEESFNTNLGFAIHSIRHREDLLYHCHLCDTTLKTKYTIETHVRSHDGCLRYKCDICGDYFNVKSELRDHENSHTGSSPYQCEVCGKHFDFQKHLSSHRRSLHAKSKSYDCKICNITYKFPSGLYRHNHLKHKNIDASVICDICGKRLSCREKLKSHQKIHLGQVFPCLVCNKPFTREIQLRVHMRTHTGEKPYVCKYCGKAFKQHSPYRYHIKNHIGLRPHVCGYCGKSFIAKSAWRIHTAGCKHKSAFSPALDAASKPDEPKDHFPHTGVVDNAIFGVIKEDKPKKKRTKDRKKKREKYYFPEINLEERKSYEVNPKTFDVPVKCDICSIQFTNNLNLGFHSKEHTPKNLYSCHLCDFKIKKREPFEIHVRAHEGLKRFQCPTCHQQFIKLRDAYEHKFLHDGETPFECDICGKKFFRSGSVVSHKYYAHSDVLTGHKNNKFECNICNKHYTTNSGLTEHNFYHHHREVDKSLMCDMCGKNFLNPGRLKEHKRTHTGERPYSCTWCSKSFPRKSNLRNHEVVHTGEKSLKNGQGVKSELEDLSLYLVKPTELSEPLKCRLCDASFTNNLDFGFHSRLHNMEKLFECHLCDFTERQKTRFEYHMYHHEGTRKYRCPICQKYLESIDKVIKHKKVHLGVKNITVKIKDMLSPEEFSSFLVPMKELDEPLRCATCFQNFTNNLDYGFHLAEHKKLRIYNCHLCDYVTNPSMRNGKEQFEKHIRNHEGSKKYKCPICSKHYTNIRDAIKHKSIHLQSVNLLTTKYNSTDGKSNIALTTRELKFLTKYNIDNPDMYYIPPIPLETPIECDQCDASYNNNVDLAMHSREHNSDRSYICHICAYKDSNQTNFELHVRRHEGIKKFKCPMCQKQFGNFQRAFEHKNVHEGTKPFECELCCKSYSGSHDLYLHKKGVHCDENSSKEQTCDICNKTVSNSLALRRHVYYTHSKKDILCDICGKAFLHQAAMKEHRVNHFQEKSFVCDQCPKSYKTKRQLRRHELLSHTSKEKRYTCKDCGKQFRFTSAYNYHLKIHTGEKPYSCLICDKKFISAGNLRLHMKSHNTHVAVKVNHVQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -