Basic Information

Insect: Hermaeophaga mercurialis
Gene Symbol: SCRT1
Assembly: GCA_951812935.1
Location: OX638362.1:5141608-5147896[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 1.6e-05 0.034 15.1 1.0 15 38 294 314 288 319 0.85

2 5 0.027 58 4.7 0.5 17 28 327 338 316 353 0.75

3 5 0.0039 8.3 7.4 0.3 18 28 354 364 344 376 0.82

4 5 0.00025 0.54 11.2 0.4 19 41 383 402 371 405 0.88

5 5 0.01 22 6.1 4.5 14 43 406 432 401 433 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	1.6e-05	0.034	15.1	1.0	15	38	294	314	288	319	0.85
2	5	0.027	58	4.7	0.5	17	28	327	338	316	353	0.75
3	5	0.0039	8.3	7.4	0.3	18	28	354	364	344	376	0.82
4	5	0.00025	0.54	11.2	0.4	19	41	383	402	371	405	0.88
5	5	0.01	22	6.1	4.5	14	43	406	432	401	433	0.84

Sequence Information

Coding Sequence: ATGAAGTTAACTCATAAAACTTCATCTACACCGCCTTCTCTTTGCGatcCACCACAAGACTTCGTTCCGAATGGTTCAACCCTTCACGACAAACCGACCACCGAGTCCGATGGAGAAACCCTAGCAGTTCCGAAACGCAGTGCGGAAGAAACTGAAGCAGCGCACGACCTCCTCTCCTTATCCCAAAGTCTGCCACCTCTACCGGCACCAAGTGTGGTCATGATCCACCACACGATACCATCTGAAGATGATCCTCCAAGCCCCACACATTGCTATAGACCTCTTTCTCGGGAAGCAGCCATGCGCCAAGCAAAGCAAGCATCGTCCGAAAAAAGACAAGTGTCTGTGATACAACACGCACCTTTACCCCAAGCCGCGAACCCTGTGATCGTACCCCAGCAGGTGGTAGTACCGTGCTACACCACGTCTCCGATAGTGTACGTCGTGCAAGTACCAGCAACGGTTCCTACGCCTCCGACGTCAGAATGTTCTTCTGATGTCGAAAACGTGCAGTTGTGCACGGTGGAAAGATTGCACCATGACGTTACGATGGTACCGGAGCAAACCGATGACATTATTATTCTTCCATTATCTCCAGAACCAGAAAACGTTGATATGCCTTTGGTACAACAGAGATTAACAAGTGCACCTTCGAACTCGGAACTCAACATTCCagatagaagaaaaagaagaaataagagGACCAATAGGAGTAGGAGCTCAGCAAACGATGAAATTGATGAGAATAGTATGGAGTTTCAGAAAAATCTTGTTGTAGCAAACACAAACACTAAATTCTATAAAGTGgtcgaagaagaagaagaagaagaagaagaccaaGAAATAGACGTGGAAAGCACCTCCGACGATCCGCAGAAGAGCCGTTACATGTGCAACATCTGCGGCAAGCAGTACGCCACATCGAGCAACCTATCAAGGCACAAACAAACCCATCGAAGCCTCGACTCCCAGTCGGCGAAGAAGTGCATGACCTGCGGAAAGGCCTACGTGAGCATGCCGGCCTTGGCGATGCACCTGCTCACGCACAAACTTGCTCACAGCTGCGGCATTTGCGGTAAGCAATTCTCGAGGCCTTGGTTGCTGCAAGGCCATCTTCGGTCCCACACCGGGGAGAAACCTTATGGTTGCGCGCATTGCGGAAAAGCCTTCGCCGATAGGTCGAACCTGCGCGCTCATATGCAGACGCATTCGAACGACAAGAATTTCAGTTGTAACAAGTGTCATAAGACTTTCGCGTTGAAATCTTACCTGAATAAACACTTGGAGTCGTCGTGTACCATGTGGGATGCCAAGCAACAAAGGTTCAAGAAAACGGTGCACGCCGAAACGCAAACTCAAACGATTAATGTCGATTGA
Protein Sequence: MKLTHKTSSTPPSLCDPPQDFVPNGSTLHDKPTTESDGETLAVPKRSAEETEAAHDLLSLSQSLPPLPAPSVVMIHHTIPSEDDPPSPTHCYRPLSREAAMRQAKQASSEKRQVSVIQHAPLPQAANPVIVPQQVVVPCYTTSPIVYVVQVPATVPTPPTSECSSDVENVQLCTVERLHHDVTMVPEQTDDIIILPLSPEPENVDMPLVQQRLTSAPSNSELNIPDRRKRRNKRTNRSRSSANDEIDENSMEFQKNLVVANTNTKFYKVVEEEEEEEEDQEIDVESTSDDPQKSRYMCNICGKQYATSSNLSRHKQTHRSLDSQSAKKCMTCGKAYVSMPALAMHLLTHKLAHSCGICGKQFSRPWLLQGHLRSHTGEKPYGCAHCGKAFADRSNLRAHMQTHSNDKNFSCNKCHKTFALKSYLNKHLESSCTMWDAKQQRFKKTVHAETQTQTINVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00387539;
90% Identity: iTF_00792465;
80% Identity: iTF_00792465;