Basic Information

Insect: Hermaeophaga mercurialis
Gene Symbol: -
Assembly: GCA_951812935.1
Location: OX638362.1:22115642-22121304[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 4.1e-15 8.7e-12 45.8 1.0 1 44 7 50 7 50 0.97

2 11 4.2e-18 9e-15 55.3 1.7 1 44 108 151 108 151 0.98

3 11 3.5e-10 7.5e-07 30.0 1.1 1 44 235 278 235 278 0.96

4 11 5.3e-15 1.1e-11 45.4 4.6 1 44 317 360 317 360 0.98

5 11 2 4.3e+03 -1.3 0.1 18 36 383 400 381 401 0.82

6 11 2.9 6.1e+03 -1.8 0.0 12 23 426 437 410 441 0.70

7 11 0.26 5.5e+02 1.6 0.0 16 26 497 507 490 516 0.87

8 11 0.007 15 6.6 2.6 11 39 533 558 529 571 0.72

9 11 0.00093 2 9.4 0.6 15 43 582 612 566 613 0.73

10 11 0.072 1.5e+02 3.4 5.0 18 41 613 633 607 634 0.89

11 11 0.15 3.1e+02 2.4 0.3 19 40 642 660 639 662 0.79

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	4.1e-15	8.7e-12	45.8	1.0	1	44	7	50	7	50	0.97
2	11	4.2e-18	9e-15	55.3	1.7	1	44	108	151	108	151	0.98
3	11	3.5e-10	7.5e-07	30.0	1.1	1	44	235	278	235	278	0.96
4	11	5.3e-15	1.1e-11	45.4	4.6	1	44	317	360	317	360	0.98
5	11	2	4.3e+03	-1.3	0.1	18	36	383	400	381	401	0.82
6	11	2.9	6.1e+03	-1.8	0.0	12	23	426	437	410	441	0.70
7	11	0.26	5.5e+02	1.6	0.0	16	26	497	507	490	516	0.87
8	11	0.007	15	6.6	2.6	11	39	533	558	529	571	0.72
9	11	0.00093	2	9.4	0.6	15	43	582	612	566	613	0.73
10	11	0.072	1.5e+02	3.4	5.0	18	41	613	633	607	634	0.89
11	11	0.15	3.1e+02	2.4	0.3	19	40	642	660	639	662	0.79

Sequence Information

Coding Sequence: atgtctaCTTCACGAAGATCGGCAATTTGGAATGTATTTACCGAAACGCACAAAGCAGATTTTATTGCTACGTGTAATATTTGTGCACAGGAGTTCTCTTACAGATCAACAActacaaatttaatgaaacaccttagAAGAAAGCATCCTGGTATTAGTTTGAAATCAAATTTGTCTGAAGGTAACCATAAACAAGTAGAAATAGTAATAGAAAGACAGTTAGAGAACGAAAGTGAAATAGAATCGTTCAAAGTTGAAGTTAAACCTGCATTAGAAGAGGGGCATGGAGATTTCATTGTATTAGGATGTGGAAAGAAAGAATCGCCTGTATGGGATTACTTTACAAAAGTAGAGAACTCAGACAGTGCAGCTGCATGTAATTATTgttgtcaaatattttcatacaaaaGTAATACCAGCAATTTAAAAAGACACCTTCAAAGGAAACATTCACAACTAGTTACTgaCACTTCCCAACTTCCTCTAGCCGCTGAAGATGAGCAGCAGCAAACTCTCCTCGATCCCCCAAAAGTCcttgaaaacattgaaaataaaccCAATCCCCCTATAATGAACAAAGTCAATTCAGATGATGAAGATTTTTGGAAGGTCCcagataatgatgatgatgaatcAGATTTTAGACCTTCTCCAGAGCCTTGTGAAGAAGAATTCCAATCTAAAGCTTCAAGCAAAAAAAGATCTTTGATTTGGAATGTCTTTACAGAAAAGCCAGATAGTGATTTTATAGCCTTATGCAATGTTTGTAACCAAGAATTTTGTTATAGAAGTactactaataatttaaaaaaacattttcaaagaaaacattCAAAGCTAAGTATGGCGGAAAAAATCGTGCCTACTAATCCTCCTGATGATCGAATTCCATATTCTTCTGATGAAGACAGAGATGAAGAAGAGgaGAAACACAGTAAAAGAAAACCGTCACGGATTTGgaactattttacaaaaaagaaacatGGTGAATATATGGCCTCTTGTAATATTTGCAAAAAGGAATTGGGTTATAGGTCTACTactcacaatttaaaaaaacatctaGACAGAAAGCATCCCCATATAATTATCcaaaaggaagaagaagaagaggaaaaaaAGactaCCCCTGAGCCTCCTGTAAAAACGTGTTTGATTTGTTTACAAAATGATTCGTCTgatgaaagtaaaaattttacacaaataaATAGTAATGATCCTGAGGAAAAGTCGTACATGGACAAAATTCAAGAAGTGGTGAACCAACCAGTGGTTATAGATGAGTCCCATGTTTTGTGTCAAATTTGTATTGAAGACTTGGAAAAAGTTCTTaagtttaaagataaaataattaaagcatTTGAGTTCTGGAATAAAATGGAACTGGAACCAGAGCCAGATGCAGAGCAGGATCCAGAACAATGTGACGCAGTAGATGACATAAAAGAATCAGATTATTCTGATTTGGAGGATGGCGAGAGTCTTGCAAAATTTACTTGTTCTAAATGCGGAAAAGTGTTTCCGTCGCCTTCAGTAATGCTAAAGCATAATTGCCATCaacctaaaaaagaaaatctaattCAAAATAGGGATGAATCCACAAGAGAGAAGAGATTTTACTGTGAACATTGTGGAAGAGGTTTTAATATTAAGTGGAAGCTGACAAAACACTTAAAAAAGTCATCTTCTAAACATAAACACATGCGAAGTCACAACGCCAAACCCGGTGaaaaatccaagaaaactccatttttatgtACTATTTGCGGAAAAAGTTTTCCGTATTCGAATGGAGCTTCTAGGCACATGAGAGTGCATTTGGGAGAAAGAAGACACGAATgtcatatttgtttaaaaaaattcagcCAAACGACCCatttaaaggTCCATTTAAGAACGCATTCCGGCGAAAGGCCTTACGCGTGCATGGTTTGTGGTAGGACTTTCTCGTTGAACGCTAGTTTGAGAAAACACATGAGATTGCACGTTGGTCAGGGCGAGTTCCTCGTTGTGAAAGATTTAGAAACAAGCATGGAGGAGAACCTTGGAAACAGCCTCTCTACGAACCTGGCTACCAATTTGGATGTTATGGAGAATTTGGGAGAGGGTTTGGTGGAAGAGGATTTGGAAACCCACATCGAACACGCCGAAGTGGTTACCGAGGATGAGATCCATGTTTTGACACATCATGCCATGAATATGGAAGGGAACCAGTGcggttga
Protein Sequence: MSTSRRSAIWNVFTETHKADFIATCNICAQEFSYRSTTTNLMKHLRRKHPGISLKSNLSEGNHKQVEIVIERQLENESEIESFKVEVKPALEEGHGDFIVLGCGKKESPVWDYFTKVENSDSAAACNYCCQIFSYKSNTSNLKRHLQRKHSQLVTDTSQLPLAAEDEQQQTLLDPPKVLENIENKPNPPIMNKVNSDDEDFWKVPDNDDDESDFRPSPEPCEEEFQSKASSKKRSLIWNVFTEKPDSDFIALCNVCNQEFCYRSTTNNLKKHFQRKHSKLSMAEKIVPTNPPDDRIPYSSDEDRDEEEEKHSKRKPSRIWNYFTKKKHGEYMASCNICKKELGYRSTTHNLKKHLDRKHPHIIIQKEEEEEEKKTTPEPPVKTCLICLQNDSSDESKNFTQINSNDPEEKSYMDKIQEVVNQPVVIDESHVLCQICIEDLEKVLKFKDKIIKAFEFWNKMELEPEPDAEQDPEQCDAVDDIKESDYSDLEDGESLAKFTCSKCGKVFPSPSVMLKHNCHQPKKENLIQNRDESTREKRFYCEHCGRGFNIKWKLTKHLKKSSSKHKHMRSHNAKPGEKSKKTPFLCTICGKSFPYSNGASRHMRVHLGERRHECHICLKKFSQTTHLKVHLRTHSGERPYACMVCGRTFSLNASLRKHMRLHVGQGEFLVVKDLETSMEENLGNSLSTNLATNLDVMENLGEGLVEEDLETHIEHAEVVTEDEIHVLTHHAMNMEGNQCG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00792581;
90% Identity: iTF_00792581;
80% Identity: iTF_00792581;