Haes018382.1
Basic Information
- Insect
- Hemithea aestivaria
- Gene Symbol
- Zfy1
- Assembly
- GCA_947507615.1
- Location
- OX382353.1:2218188-2237917[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.34 26 6.1 1.0 1 23 385 408 385 408 0.93 2 11 8.2 6.4e+02 1.8 0.4 2 23 414 435 413 435 0.91 3 11 0.61 48 5.3 8.4 1 23 467 490 467 490 0.95 4 11 0.0059 0.46 11.7 1.0 2 21 495 514 495 515 0.92 5 11 0.00033 0.026 15.6 0.9 2 23 529 550 528 550 0.94 6 11 2.9e-05 0.0022 18.9 0.7 1 23 555 577 555 577 0.98 7 11 0.06 4.7 8.5 5.6 1 21 586 606 586 611 0.94 8 11 0.0005 0.039 15.0 1.7 1 23 619 642 619 642 0.92 9 11 0.011 0.86 10.8 0.2 1 23 648 671 648 671 0.87 10 11 0.022 1.7 9.9 0.4 3 19 684 700 682 701 0.89 11 11 0.052 4 8.7 1.2 1 23 714 737 714 737 0.98
Sequence Information
- Coding Sequence
- ATGAAGGAAATCGATATAAATATCGAAGGGTACAATGTGAACGGGATCTGTGTTGGTTGTTTGAACTATAATCGCAAGATGTTTTACGACGACGATGTAAAAGAGTGTTTCAAATTAATCGCAGATATTGATGTGCCAGATGGGCTTCAAATACAAGTCTGCTGGGAGTGCCTGGCAGATGTAAAGAATATAGTACGATTCCAGCAGCGAATATTGAAGTGTTATGATATTTTACTTGCATATTCTCAAAAGaaaagcgaactcgaatacgaggttaggataaggggggaaaccccagcagcatctgttgatgaattgcggaaacaaatagttaaacttgcacctatgtacccatctgagcacatacttgagtctcccttggaggtgccccgagacCTTAGAGGTTGTTTAGAAGTCCTAACTAAAATTCAAACAATACTAGATGCCTCTGAAATTAGTACACCTGCAGCCATGAGAGCTCAAAATATGCTGAATCATTTAAATAACCGTTTAGCCCGCATCACATGTGACAGCGAGGCACATCAGAAGGAGCACGATGAAATCAGTAAAGGTTATAAGCTTCTTGCACAAAGTGAACATAGCCGCCAGGCGCCCGCGCTCTGTGACAGGGAAAATGTCAAAATGAGCAATCGCCGGCCGGCCATCTTTCTAGCTAACCACACATTTCTGAATTCTCCGGAAGATTTCACAAAACATGCGTTCATTCGTTTTGAAACTAGCACGCTGGAGAATACAGACTCCACCGTGTTTCAAGTAGAAATTGATATTAAATATGATGTTAAAGAAGAAAGTTCACATGATACAGCGGATATAGAGGATAATCCAGAAATAGAGCCAGTGAAAGAAGAGCCATATCCAGAGCAATACGAGGAGTTTGACTTCAATCAAGAAGATATAGAAAAGGAGGAATCATCAGACGAGGATGTTCAGCTTTCTGAACTCAAGAAGAAGAAAATTAAGAAGGACAAGAAGAAAAAAGTTAAGAAGAAAGATAAGGAAAATGAATCAAAATCATCCAGAAAACTAAAGAACCTTCCAGAAAGCGTGGTGGAGCTGATAACAATGACTGAAGAGGAGATGTGGCAAGTCAGGCAAAAGGATGTCACAAGTCCGGAGTTCGAGAAGCTCAAGTTTAAATGCACTGATTGTATACTCAGCTTTAATACTAAGAAATTGAAGGATGCACATTTAAATGGGAAACATAAGAAGGCAGCCCAGCAATGCGACGTATGCAAAGCTTATTTCTTGACCAGCGACAAAATATCCGCGCATCGATCTCTACATCTAACCGCGTACAAGTGCACCGTCTGCCTGCACATCACTACACTCAAGCGCTGCATGTTGCGACATCATTGTGCGGCCACACTGCGCGCCGAGCATCGCTGTAACTGCTGCGATATGGCCTTCAGTACGAAATCCAAGCTGTCGTATCACAAAAACGTGTGTCACCAGGAAAAGCCTCAGTGTGATTGCTGTGGAAAAGTGTTCGCCAATAAAATGACGCTCAAGTACCATCTCAAAATCTTGCCTCAAAATAAAGAAGAGAAACCTACCTTGTACATACCCTGTAAGGGATGCAACAAAGTGTTTCATTCGAAGAAAAGTTACAGAGCTCATGTTGTAATCCACGACGGCCGCACGTACCCTTGCCCAATTTGCGGCAAACTCTTCAAATGGAAACGCAATCTATCCCGACACACACGGAACCATAGAGAAAGATCATCTGGAGCCACCCATGAGTGCAGAGAGTGCATGAAGACATTTAGTTCCCGGGACTGTTATAATAATCATATGAAGCTTAGTAAACGGCACAATCATCCTGCTAACTATATTCACGAGTGCAATTACTGTGGTAAAAAGTTCCCAACAAAATGGTGTATGGTCGACCACATAGATTGGGACCATTTGAAGCGAATGAAGTACCAATGCAATGTGTGTTTTaagGCGTTCAAAACGGCTAAAATCATGGTGGCTCACGTGAATAATATACACGACGGTAAAAAGAGAGAGCCAGAAGGCGAGCATCTGTGTGAAATATGTGGGAAATCATATAAGACAGTAAAACGTCTTAAAGGCCACGTATGGGCGATGCACACTCAACGCTCCTCAGCCAAAAGTTACAAATGCAAGCTATGTGCAGCTACATTCACTTGGCAAACCTCCATATACAAGCATATGAAGATGATGCATGATAATAAACGGACTAAGCCACCCCGCGCCCCGCCAGTCGTGAGAAAACAAGAACCTTTTCCGGACATGGATATAACCAACAGAATGTACTTCCATCAAAACATAGCCAATATAGGGCATATGCAGCCTTTACCGCAACAGGGATTGATTACTGGACTGTAG
- Protein Sequence
- MKEIDINIEGYNVNGICVGCLNYNRKMFYDDDVKECFKLIADIDVPDGLQIQVCWECLADVKNIVRFQQRILKCYDILLAYSQKKSELEYEVRIRGETPAASVDELRKQIVKLAPMYPSEHILESPLEVPRDLRGCLEVLTKIQTILDASEISTPAAMRAQNMLNHLNNRLARITCDSEAHQKEHDEISKGYKLLAQSEHSRQAPALCDRENVKMSNRRPAIFLANHTFLNSPEDFTKHAFIRFETSTLENTDSTVFQVEIDIKYDVKEESSHDTADIEDNPEIEPVKEEPYPEQYEEFDFNQEDIEKEESSDEDVQLSELKKKKIKKDKKKKVKKKDKENESKSSRKLKNLPESVVELITMTEEEMWQVRQKDVTSPEFEKLKFKCTDCILSFNTKKLKDAHLNGKHKKAAQQCDVCKAYFLTSDKISAHRSLHLTAYKCTVCLHITTLKRCMLRHHCAATLRAEHRCNCCDMAFSTKSKLSYHKNVCHQEKPQCDCCGKVFANKMTLKYHLKILPQNKEEKPTLYIPCKGCNKVFHSKKSYRAHVVIHDGRTYPCPICGKLFKWKRNLSRHTRNHRERSSGATHECRECMKTFSSRDCYNNHMKLSKRHNHPANYIHECNYCGKKFPTKWCMVDHIDWDHLKRMKYQCNVCFKAFKTAKIMVAHVNNIHDGKKREPEGEHLCEICGKSYKTVKRLKGHVWAMHTQRSSAKSYKCKLCAATFTWQTSIYKHMKMMHDNKRTKPPRAPPVVRKQEPFPDMDITNRMYFHQNIANIGHMQPLPQQGLITGL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -