Haes016761.1
Basic Information
- Insect
- Hemithea aestivaria
- Gene Symbol
- ZFY
- Assembly
- GCA_947507615.1
- Location
- OX382352.1:1176931-1181449[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.00053 0.041 14.9 0.4 2 23 119 140 118 140 0.97 2 13 0.054 4.2 8.6 1.1 2 23 147 169 146 169 0.94 3 13 8e-06 0.00062 20.7 3.1 1 23 176 198 176 198 0.98 4 13 0.099 7.7 7.8 2.9 1 23 203 225 203 225 0.98 5 13 0.13 9.9 7.5 1.1 1 23 230 253 230 253 0.96 6 13 0.056 4.4 8.6 0.3 2 21 262 281 261 282 0.93 7 13 3.3 2.6e+02 3.0 4.6 2 23 290 311 289 311 0.96 8 13 0.015 1.1 10.4 5.5 1 23 374 396 374 397 0.96 9 13 5.2 4.1e+02 2.4 1.1 1 19 404 422 404 425 0.90 10 13 0.32 25 6.2 5.1 3 23 434 454 432 454 0.97 11 13 0.01 0.8 10.9 2.8 1 22 457 478 457 480 0.90 12 13 0.023 1.8 9.8 0.6 2 23 486 507 485 507 0.96 13 13 0.00035 0.027 15.5 3.5 1 23 513 536 513 536 0.98
Sequence Information
- Coding Sequence
- ATGTCAAAAGAACAGGACACCGACATAGAGTTTGTCAATGTATGTGTGAAAATAGAGATAGATGAAAATGGAACAGTGGAGTGGTCGGACGGAAATGACCAGGATGGAGGGAACCAAGGAGGTGGTAATCAAGAAGGTGTTAGCCAAGAAGATAATAGCCAAGAATATGATAGCCAAGAAGATGATAGCCAAGAAGATGATAGACAAGAAGATGATAGCCAAGAAGAGAGTTTACCAGATGACAGAGCCCACTTGAAAAGAAGGCGTGATAAACAGAAAAAAAAGCTATCCTCGCCTGTAGAAGACTCTTCCAAGACTGAGAAAAAAGTGCAGAGGAAACCTCCGAACTCACTCAAATGCGATCAATGCGACTACAGAGCTACATATCAAAGCACACTAAACATTCACTTGCTGATGCATACAGATACTAAACACTTATCTTGCAAATCATGCTCGTTCACCACTAAATACCCACTCTCCTTACAAAAACATATCAACGCTAAACACAATGAGAATAAAAACCAATTTGAATGTAAAGATTGTGATTACACAACGAAGTCTAAATTCAATCTAACCGCTCACAAACGCAAGCATTCCGAACAAGTGTTTAAATGTGCTTCATGCAACTTCTCATCTCCTCACAAGTATAAATTGGCAACGCACAGTAAAGTTCACAACGAAGAGATGTACAAATGTGAACAGTGCCCGTTTGAAACTAAATTTGAAGGACACATAGTGAGGCATCGAGCTAAAATACACAATCAAGTGACCGCGGAAGATTTGAAATGTGAGAAATGCAATTATGTCACTCGAGTCAATTGGAGATTAAACATACATCTGAAAAAGAGCATTCAAGACAGTATTATTCAGTGCGACCACTGTGATTTCAATTCCAAGTACGAATGTGAATACAAATTGCATAAAGTTACCCATCGATATGAAATTGAAAACAACGAGAAAATATCCTCAATTTGTACTCGTAATGAAAGGTTTACTATGGAAGACAGCGAGAAATCTCGTGATTTAGACTACAATGAATTGAACAACTTTATAATTGATACGGATTGTGTGAATTGGAAAATGGTGCCCGTACACAAAACAGAAGACAAAGAGAAACCGTTTCAGTGCTCCAAATGTGACCACACGTCTAAATACAAAGCTGCCGTACAACGTCACTACGAGAGACACCATACGGATCAAATCAAGCCGTATAAATGTATCAACTGTGATTTTTCAACTAAAACGAAACACCAAATTGCTTTACACAACTCGAGAAGTCGTTCCGAACTAGAAATAATTTGCAAAATGTGTCCGTACAGAACTCACTACAAATGTTCCTTCGTAACTCATCAAAGGATGCACTATCCGTATAAATGTTCTCAATGCGACTACACATGTAAGAGTACGTATGATATACAAAGACACAACCTGGCCGTTCATCTTGGAAAGATATTGACTTGTGAATACTGCGGATTTAAAAGTGCTCGGAAAGAAACAATGTCCTACCACTTAACAATCCATACGGGACAACGTAGATACAAATGTGAATTGTGTGATTATTCATGCATGCGGCCCAGTTTGCTAATGAACCATAAGAAGAGATTTCACCGGCCGGAAGTGTTGCAAAATAAGAATAACTCAGACTTAGAGTTGTCAGATGAAGATTTTGGCAGTTCGTCTTTGTCATACAATCCGAATCTAAATTGGGATGACAGGCCACCGAGCCATATACCAATGTCTAGTCTAATGAGAACTGAATAA
- Protein Sequence
- MSKEQDTDIEFVNVCVKIEIDENGTVEWSDGNDQDGGNQGGGNQEGVSQEDNSQEYDSQEDDSQEDDRQEDDSQEESLPDDRAHLKRRRDKQKKKLSSPVEDSSKTEKKVQRKPPNSLKCDQCDYRATYQSTLNIHLLMHTDTKHLSCKSCSFTTKYPLSLQKHINAKHNENKNQFECKDCDYTTKSKFNLTAHKRKHSEQVFKCASCNFSSPHKYKLATHSKVHNEEMYKCEQCPFETKFEGHIVRHRAKIHNQVTAEDLKCEKCNYVTRVNWRLNIHLKKSIQDSIIQCDHCDFNSKYECEYKLHKVTHRYEIENNEKISSICTRNERFTMEDSEKSRDLDYNELNNFIIDTDCVNWKMVPVHKTEDKEKPFQCSKCDHTSKYKAAVQRHYERHHTDQIKPYKCINCDFSTKTKHQIALHNSRSRSELEIICKMCPYRTHYKCSFVTHQRMHYPYKCSQCDYTCKSTYDIQRHNLAVHLGKILTCEYCGFKSARKETMSYHLTIHTGQRRYKCELCDYSCMRPSLLMNHKKRFHRPEVLQNKNNSDLELSDEDFGSSSLSYNPNLNWDDRPPSHIPMSSLMRTE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -