Basic Information

Insect: Hemithea aestivaria
Gene Symbol: -
Assembly: GCA_947507615.1
Location: OX382334.1:16255547-16259433[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.02 1.5 10.0 2.7 3 23 35 56 34 56 0.97

2 14 0.00031 0.024 15.7 3.5 1 23 93 116 93 116 0.91

3 14 6.2e-05 0.0048 17.9 2.1 1 23 118 140 118 140 0.99

4 14 8.1 6.3e+02 1.8 1.3 1 21 152 172 152 174 0.75

5 14 0.00092 0.072 14.2 0.0 1 23 179 201 179 201 0.98

6 14 0.021 1.7 9.9 0.4 2 23 228 250 227 250 0.91

7 14 1.6 1.3e+02 4.0 6.2 1 19 257 275 257 279 0.90

8 14 7.3e-05 0.0057 17.7 0.4 1 23 285 308 285 308 0.92

9 14 0.0064 0.5 11.6 2.3 1 23 317 340 317 340 0.96

10 14 2.1 1.6e+02 3.7 0.1 2 23 348 371 347 371 0.94

11 14 0.18 14 7.0 0.1 2 23 404 425 403 425 0.93

12 14 0.008 0.62 11.2 0.3 3 23 433 453 431 453 0.95

13 14 8e-05 0.0062 17.5 5.1 1 23 461 483 461 483 0.98

14 14 0.00053 0.042 14.9 0.7 2 22 490 510 489 510 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.02	1.5	10.0	2.7	3	23	35	56	34	56	0.97
2	14	0.00031	0.024	15.7	3.5	1	23	93	116	93	116	0.91
3	14	6.2e-05	0.0048	17.9	2.1	1	23	118	140	118	140	0.99
4	14	8.1	6.3e+02	1.8	1.3	1	21	152	172	152	174	0.75
5	14	0.00092	0.072	14.2	0.0	1	23	179	201	179	201	0.98
6	14	0.021	1.7	9.9	0.4	2	23	228	250	227	250	0.91
7	14	1.6	1.3e+02	4.0	6.2	1	19	257	275	257	279	0.90
8	14	7.3e-05	0.0057	17.7	0.4	1	23	285	308	285	308	0.92
9	14	0.0064	0.5	11.6	2.3	1	23	317	340	317	340	0.96
10	14	2.1	1.6e+02	3.7	0.1	2	23	348	371	347	371	0.94
11	14	0.18	14	7.0	0.1	2	23	404	425	403	425	0.93
12	14	0.008	0.62	11.2	0.3	3	23	433	453	431	453	0.95
13	14	8e-05	0.0062	17.5	5.1	1	23	461	483	461	483	0.98
14	14	0.00053	0.042	14.9	0.7	2	22	490	510	489	510	0.89

Sequence Information

Coding Sequence: ATGGCTTCATCCAAAGAGAAAGTTTACGCGTTAATCACTCAGGACAAAATTCAAATTCATATACCGAAGCAGACCGCTGTCGAGAAACTGGGCGGCATCCTCTGCCACATTTGCAACCAAATATTTGCTAAGAAGAGGAGCTATGACACTCACTACCGCAATCAACACAAGGGTGAAGTGGAGGCGGTGTATTCGTGTGTGGTGTGCAAGAAGCAGATCACCGGGTATCCAAGCTTCCGTAACCACTGCTACCTCAACCATGTCGTCAAGAACAAATTCCAATGTAAGCACTGTGACAAGAGCTTCTGCAAACAGTCCATTCTCAATAATCATGTTGCTGCAGTACATTCATATAAATGTTCCTCTTGTGACGAGAAATTTACATCCAAGATTGAATTGAACACACACAAAAGCACACACAACAAGTCGGTGATAGCTAAAACTGATCCTCCGTACGACTGCTTCAAATGTGGAAAATTACTTAAAAGCATAGACATGTGCGAGAGCCATATTGATGACCATACAGAAATAGTCTACACTTGTCCCATTTGTAACGAGGCTCTGTCTAGTAAAGCGGAAGCTATAAAACATTTGACGGTACATTATGATGATAACTTGCCTATTGGAGAAGCTGAAGCACCTCTTAGCATGGATTGCTCCATCGCAATATTAGGTGGTATTCGATGCTGCCTCTGTGACATGGTATTCCCTAACAAAGCAGACATAAATGCTCATTTCCTCAACGAACATGATGAAAAAACAATTGTGTACACATGCAATGTTTGCGGAAAACAATATGACAAATATTCTACATTTGGAAGTCACTGCCACTTTCACATCGCTAAAGATAAATTTCAATGTGATCAATGCACAAAGTCATTCCCTCGCCTATCGTTACTGGTGATCCACACAGAAGCATTCCACTCGGAGTACTCGGGAAACAAGCCGTTTGCGTGCGACAAGTGCACCCACGGGTTCATGACTCGCTCCCGGCTCAGAGAACACAAGAGGATCGTGCACGACACTGACGAGTTTGACCTCAAATGCACCTACCCGGGATGTTTTGCTGTGCTGAGTAGCCCGCGCGACGCGATAGTGCACCGCAAGCGGCACCTGTCCGCGGAGGCGTGGTGTCGCACGTGCGGGCTCAAGCTGGCATCCGCGCGCGCCGCCGCCGCGCACCTGGACGCACACGCCGCCCTGCGCCTGCGCTGCCCCGCCTGCGGCCGCGGGTACCGGAGCCGGCGCCGCTTGTTGCCGCACGTGCGCGCACACTACGCCGCGCTCGTGCACCTGTGCCGTGTGTGTGGTAAAGCCTACGCGGCGCTGGCTCGCCTCGCGCAGCACCAGCGCTCGCACGCCGACCCCGCCGAGCGCAGGCATCGCTGCCATCTCTGCACCAAGACATTCGACAAGCCATACGACCTGCGGCAGCACCTAGACACCCACTCAGGACTACGGGATCACATCTGCATAATATGCACACGCGGATTCTCCAGCGCCTCCAACCTGCGAAAGCACACGCGACGCTGCCAACGCGAGCCTGCGAACAAGGGGGCTAACATCACCGCCACACCACAGGAAGCACCGCCGCTCAACAATCTCCTCGTCCCTACTCACGCGCAGGAGGATGTCCTGCTGCCCGACCACATTGAGCTCTTTGACGAAGTTTCAGGAATGCCCGCACCACCAGTGTCGCTAACATCCATCTCATTACAAACATCCCCCGAGCTGGTGTGGGACAGTGAGCCCCAGTACCACTCGCTGGGAGTACCGCACGAAGACGACCACATACTGCCTCACATCGACCCGCTCCTCACCATCAAACCGGAGAAAATGTACGTACACGACCCCAAACTCAACGACTTCTCTCTCTGTATGGACATGGTCAAGTCCGAACAAAAGTTTAATCCGGTTCTCGCTATAGGAGTAGAAAGTCTCGTCCGTAATCTACTCCCTGATAACAAATTCACCATGTACTCCGATGAATCTTATCCGATGTACGAACCTAGAGGTTAA
Protein Sequence: MASSKEKVYALITQDKIQIHIPKQTAVEKLGGILCHICNQIFAKKRSYDTHYRNQHKGEVEAVYSCVVCKKQITGYPSFRNHCYLNHVVKNKFQCKHCDKSFCKQSILNNHVAAVHSYKCSSCDEKFTSKIELNTHKSTHNKSVIAKTDPPYDCFKCGKLLKSIDMCESHIDDHTEIVYTCPICNEALSSKAEAIKHLTVHYDDNLPIGEAEAPLSMDCSIAILGGIRCCLCDMVFPNKADINAHFLNEHDEKTIVYTCNVCGKQYDKYSTFGSHCHFHIAKDKFQCDQCTKSFPRLSLLVIHTEAFHSEYSGNKPFACDKCTHGFMTRSRLREHKRIVHDTDEFDLKCTYPGCFAVLSSPRDAIVHRKRHLSAEAWCRTCGLKLASARAAAAHLDAHAALRLRCPACGRGYRSRRRLLPHVRAHYAALVHLCRVCGKAYAALARLAQHQRSHADPAERRHRCHLCTKTFDKPYDLRQHLDTHSGLRDHICIICTRGFSSASNLRKHTRRCQREPANKGANITATPQEAPPLNNLLVPTHAQEDVLLPDHIELFDEVSGMPAPPVSLTSISLQTSPELVWDSEPQYHSLGVPHEDDHILPHIDPLLTIKPEKMYVHDPKLNDFSLCMDMVKSEQKFNPVLAIGVESLVRNLLPDNKFTMYSDESYPMYEPRG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -