Basic Information

Insect: Hemithea aestivaria
Gene Symbol: -
Assembly: GCA_947507615.1
Location: OX382350.1:3362100-3363143[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00089 0.069 14.2 0.5 2 23 24 46 23 46 0.95

2 9 0.016 1.3 10.3 0.2 2 23 74 96 73 96 0.96

3 9 0.00038 0.03 15.4 1.2 2 23 119 140 118 140 0.97

4 9 0.00017 0.013 16.5 0.5 3 21 146 164 145 165 0.94

5 9 0.0014 0.11 13.7 0.4 1 23 202 225 202 225 0.93

6 9 0.027 2.1 9.6 2.4 1 23 232 255 232 255 0.94

7 9 6.3e-06 0.00049 21.0 0.2 3 23 262 282 261 282 0.97

8 9 5.9e-05 0.0046 18.0 0.8 1 20 288 307 288 310 0.94

9 9 8.8e-05 0.0069 17.4 6.6 1 23 316 339 316 339 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00089	0.069	14.2	0.5	2	23	24	46	23	46	0.95
2	9	0.016	1.3	10.3	0.2	2	23	74	96	73	96	0.96
3	9	0.00038	0.03	15.4	1.2	2	23	119	140	118	140	0.97
4	9	0.00017	0.013	16.5	0.5	3	21	146	164	145	165	0.94
5	9	0.0014	0.11	13.7	0.4	1	23	202	225	202	225	0.93
6	9	0.027	2.1	9.6	2.4	1	23	232	255	232	255	0.94
7	9	6.3e-06	0.00049	21.0	0.2	3	23	262	282	261	282	0.97
8	9	5.9e-05	0.0046	18.0	0.8	1	20	288	307	288	310	0.94
9	9	8.8e-05	0.0069	17.4	6.6	1	23	316	339	316	339	0.97

Sequence Information

Coding Sequence: ATGGAGAACGCTCGCGCCGTAATAGAACATACAACGGCGTATCCGTTTAGGCTTCCAGGGGTCAAGTTAACGTGCGTCTTCTGCTTCGAATCTTTTCGAGAACCCGAAATGTTCCGAACTCATATGCGGGAGGAGCACAAAGAGTACACCCCCCAAAACGCATTTTTACACTTGAATGGGATCTACACGGGATACCTTAAAGTCGACATCACAGAGATGCGCTGTCGCATCTGCAACGAAACTATCGATAACCTCGATGAGATCACACGACATTTGAATAGTGAGCACTCTATACCCATAAATTTTGACCACGATTTGGGGTTGATTCCTTTTCGATTAGAAAAAAATAGATTGACATGCCCTATCTGTGACTACAGGTCTATTCATTTGCGGACCCTGAGCAGGCATGTGCAAACGCATTTCTTGAAAAACATTTGTAAACACTGCGGCAAAGCTTACGCCACGATGAGCTCACTGCATGCTCATGCTAGGAACGGCTGTCCAAAACTTACCGAGGGCTCGCCACTACGTCGATGCAGAACTTGTAAAGAGGATTTAAGTTCTCCAGACGAACATTTTGGTAAATCACCGCGATGTAGACCGTACGTTTGTAACTTTTGTCCGGAAAGGTTCCAACGAAAGTCAGAAAAGCAGATGCACTTAGAAGCGGTGCATAGCAGACCGAAACGCACTTTTGAATGTACGGAATGTGAGCAGATATTTAAGTGTAAGACCACTTTGAGCAGACATTTTTTGATTGCGCACACAGAAGATCATGTTGCATGCACAGATTGTGGGGCCAAGTTTGCTACGAAAGTAGAGTTAAAGAGACACCTAATTTCCCACACTGACAAGAAAGAGTTTGTCTGCACGGTTTGTTCAAAGGAGTATTACAGAAAGTCGACTTTGAAGGAACACATGTGGATTCACAGCGAGGTCAAGAGGCACGAATGTCAGTATTGCGATAAAACTTTTAATCAGAAAGTATGTTGGAAGAGTCATATGAAGTCGCGACATCCTGAACATTACGATCCAACAGCTTAA
Protein Sequence: MENARAVIEHTTAYPFRLPGVKLTCVFCFESFREPEMFRTHMREEHKEYTPQNAFLHLNGIYTGYLKVDITEMRCRICNETIDNLDEITRHLNSEHSIPINFDHDLGLIPFRLEKNRLTCPICDYRSIHLRTLSRHVQTHFLKNICKHCGKAYATMSSLHAHARNGCPKLTEGSPLRRCRTCKEDLSSPDEHFGKSPRCRPYVCNFCPERFQRKSEKQMHLEAVHSRPKRTFECTECEQIFKCKTTLSRHFLIAHTEDHVACTDCGAKFATKVELKRHLISHTDKKEFVCTVCSKEYYRKSTLKEHMWIHSEVKRHECQYCDKTFNQKVCWKSHMKSRHPEHYDPTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -