Haes018496.1
Basic Information
- Insect
- Hemithea aestivaria
- Gene Symbol
- ZFY
- Assembly
- GCA_947507615.1
- Location
- OX382353.1:3850801-3873926[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.07 5.5 8.3 2.7 1 23 253 276 253 276 0.98 2 11 0.00061 0.048 14.8 0.6 1 23 283 305 283 305 0.99 3 11 0.22 17 6.7 0.6 1 23 309 332 309 332 0.89 4 11 0.55 43 5.5 0.9 1 23 339 361 339 361 0.80 5 11 1.2e-05 0.00093 20.1 1.6 2 23 366 388 365 388 0.96 6 11 3e-05 0.0024 18.9 0.9 1 23 394 416 394 416 0.97 7 11 0.0087 0.68 11.1 0.3 3 20 429 446 428 448 0.94 8 11 0.00015 0.012 16.6 5.0 1 23 460 483 460 483 0.94 9 11 9.7e-05 0.0076 17.3 0.3 1 23 488 511 488 511 0.98 10 11 1.9e-06 0.00015 22.6 1.5 3 23 520 540 519 540 0.97 11 11 2.2e-06 0.00017 22.4 1.3 1 23 546 569 546 569 0.95
Sequence Information
- Coding Sequence
- ATGGATGTGAAACACGAAAATTTATCGCTTTGCAATGCATGTCTTTGTGTTGGAAGAAATCTCTATCAAATTACTGAAGAAAAGGCGAAACTGTTCTATATTTGTGCACTGAGTGAGATACCACTATTCAACTCATCAACGGCAGTGCCCGCAGTTTGCTACGAATGCAGACTATCATTGCAGAGAGCCGTGCAGTTTAAAGAACAAGTGAAAGACTCCTATAGGATACTCGTTACTTATACCAGTGAGAACCTCCAATCTTGCCTTATATCAGATGTGTCGAGACCTCCTCGGTTGAAAGTGAAAGTCAATGATAATATAAATATAGAAGGTACTTACAGCTTTGAACTGTTCGATGATGACATCAAAAATGATGAGATTGTACAGGACACAAAAATCCCGAAATCTTCAGAAAATATAAACCAAAATAGAGTTCCTTGCACTCAAAGGGTATTCGTGAAAGAGGAAGATATTAAATTGGAGCCAGATGGCAGTGATATCGATGCTATTTATTCGGACAGTCAAGAAAATTCTATACCTATAGACCATCTAGATGACAACGATATAAAATGTATCATAGAAAACAAAACCAGAAAGAAAGTCAAAAGAAAACACAAAGGGAAAGTGAAGAAGTTAAAAAGTAGTAGAAAAACAAAAAACGGCATACCCGATATGATAAAAATAGACCTAACTCTAGAAGAAATGGCGCTAGAAAGAGACAGAGAATATGAGAAAGAGAGCTACGTTAAAGCAGAGTTTAAATGCGAGTCTTGCATCATTGGTTTTAACTACCAGAAGTCGTTTAAAACACATTTGAAAACTAAACATGCACCTGATTTAGGCGATTATACATGTCCAATATGCAAAACTGTGCTAGCTTCTGTAGATTCCTTCACTACGCATTATAAAAGGCATATGAGAAGATTTGAATGCACCATATGTCAAAAACGCACAATAGATGTAAAAGTGATGGAGCAGCATTATTATTCAAGCCATGGGATATCTCTCAAGAAATATAAATGCAATGAATGCGGAATTATATCAAAATCTATAGATTCACACAGATACCATGCAGACACACACAAATCTAGACTTCAATGTACGGAATGTGACAAAACTTTTAGACATCGCGGCGGCTTGCTCAATCATAAACTTACAGTGCATGAGTTACGTAATGATTTTCCTTGCAACATCTGCAATAAAGTGTTCCGTTGGAAAAACAGCTTGAAACGACATTTAGACTCTCATGATGCTAAGAACAAAGTACCCCAAGACGCAGCGTTCTGTGTGATGTGCAACATAAGCTTCGCTTCAACGAGTTCATACCAACGGCACTTGACTAACAGTCTTAAACATGTCACTAAGGATGATTTCAGATTTATATGCGACCACTGCCACAGAAGATTTTCCAATAAAACAAAACTGAGAGATCATATAGAGGAGAAACATTTACACAGGACTTATCAATGCGATATATGTTTAAAGGTATCAAAAAATCGTGTAAATCTAGACCAGCACATCCGAAATGTGCATAAGGGTAGGCCTAACAACAAAATTTGTCATCACTGTGGAAAAGGATTCCCTACTAAAGTGCAGCTAGAATCTCACATTCGTGCCCACACAGGGGAACGGCCGTTTATTTGTGAATACTGTCCTACGACGTTCTCTCAACAATCCAACTTGTACAAGCATAACCGACAAGTACATCTAAACATGAAATCCAAGCGCTATCCCCTCACTAAGAAGAGAAAAGAAGATGCATTGCCCATTAACAATGATATGCCCGTGGAATATAACCCTATTGAGTTAGCTTTTCACATGTAA
- Protein Sequence
- MDVKHENLSLCNACLCVGRNLYQITEEKAKLFYICALSEIPLFNSSTAVPAVCYECRLSLQRAVQFKEQVKDSYRILVTYTSENLQSCLISDVSRPPRLKVKVNDNINIEGTYSFELFDDDIKNDEIVQDTKIPKSSENINQNRVPCTQRVFVKEEDIKLEPDGSDIDAIYSDSQENSIPIDHLDDNDIKCIIENKTRKKVKRKHKGKVKKLKSSRKTKNGIPDMIKIDLTLEEMALERDREYEKESYVKAEFKCESCIIGFNYQKSFKTHLKTKHAPDLGDYTCPICKTVLASVDSFTTHYKRHMRRFECTICQKRTIDVKVMEQHYYSSHGISLKKYKCNECGIISKSIDSHRYHADTHKSRLQCTECDKTFRHRGGLLNHKLTVHELRNDFPCNICNKVFRWKNSLKRHLDSHDAKNKVPQDAAFCVMCNISFASTSSYQRHLTNSLKHVTKDDFRFICDHCHRRFSNKTKLRDHIEEKHLHRTYQCDICLKVSKNRVNLDQHIRNVHKGRPNNKICHHCGKGFPTKVQLESHIRAHTGERPFICEYCPTTFSQQSNLYKHNRQVHLNMKSKRYPLTKKRKEDALPINNDMPVEYNPIELAFHM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -