Haes015579.1
Basic Information
- Insect
- Hemithea aestivaria
- Gene Symbol
- ZNF219
- Assembly
- GCA_947507615.1
- Location
- OX382350.1:10016261-10019988[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.64 50 5.3 0.9 3 21 131 149 130 150 0.93 2 18 0.16 13 7.1 0.0 2 23 182 204 181 204 0.93 3 18 6.7e-05 0.0053 17.8 0.6 1 23 209 231 209 231 0.97 4 18 2.3 1.8e+02 3.5 2.0 6 20 238 252 235 254 0.89 5 18 0.0011 0.083 14.0 1.3 1 23 269 292 269 292 0.96 6 18 9e-06 0.0007 20.5 1.2 1 23 298 320 298 320 0.98 7 18 3.8 2.9e+02 2.8 0.6 3 23 329 349 327 349 0.81 8 18 0.0055 0.43 11.8 2.2 1 23 355 378 355 378 0.96 9 18 1e-05 0.0008 20.3 0.5 2 21 504 523 503 524 0.94 10 18 2.5 2e+02 3.4 0.1 3 23 531 552 529 552 0.79 11 18 1.3 1e+02 4.3 0.4 3 23 559 580 558 580 0.97 12 18 2e-05 0.0016 19.4 2.0 2 23 586 607 585 607 0.96 13 18 0.046 3.6 8.9 2.9 2 21 611 630 610 631 0.93 14 18 5.8e-06 0.00045 21.1 0.4 1 23 657 680 657 680 0.94 15 18 0.00041 0.032 15.3 0.9 1 23 686 708 686 708 0.95 16 18 0.024 1.8 9.8 0.1 1 23 714 736 714 736 0.98 17 18 0.0044 0.34 12.1 0.6 1 23 742 765 742 765 0.94 18 18 0.0007 0.055 14.6 0.8 1 23 771 796 771 796 0.93
Sequence Information
- Coding Sequence
- ATGAGGAAGAAACATTATGGGGCAGATCCTGAGTTGTATAAGAAAGTTGACAACGGGCCTGAACTTCCCCCGACACTCTGCAAAACTTGCTCCGAAGCTGTCACTCAGACGGCTCAGTTCATCCAGTTTTGCAAGCTATCAGCTCAACATTGGGAATATAGTCTCAACTATTTAGATACTCATGATCCAGCGGATGAAGATAAAACCTTTTTCCTATTCTACAAAGACCAGACTGTCCACACCTTAACATCAACAGTCCGTTCAGTCGAACGAGCCGCAGATTTCCTCAACAAAAAGAAGAAAGAGAATAGGAAAAACTTATCCCATTGCAACTGCCCCGCACCACACCAGGGGGAAGAGGAGCAGGGGAAAAAAAGAAGAAAAAAAAACTGCCCTCATTGCGGAATGTTGTTCCCCTGTTTGGAAACGTTAAACAGTCATATAAAGTATACTTTGAAGAGTGTCTGTCTAATATGTGGCTTAATAATCAATAAGAAAGAATTGCCTAAACATTTAAGTGAGAAACACGGTGACGTGGTCGTTCCGTGTCCGTTTTGTAACGAACTTTTCTCGAGTTTTGATGAAGCTAATAACCATGTAGCTAGTGATCACGGACCGACTTCTTACAACTGTCAGATTTGCGGCAGAGGGTATTCAAATAAAAGAGGGTTAATATCTCACACTTCCCGCCACGCTTTACACTCCTGTTTTTGCGGGAAAAGCTTCGAAAACCTCAGATGTTATAACTATCACACGTCGAAATGCAAAGTCCCCAAGAAGAAACCCAAAAATAGTGATTGCTCGTATGAATGCGATTACTGCGGGGCAAAGTATGACGTTAAACAATCTCTAAAGATGCATATTATGCACAAACATCTCTACATACAGCCTTTTGTGTGTCATATTTGCGGTAAACGTACAAACACCGTCAGCGCTTTAAGGTCTCATCAGGAAACTCACAAAAAAGAAAGAAAGACGATAGATTGCGAGTTCTGTGGAGCCAAATTTCGGTCAGGCTTAGGGCATAAGCTACATTTAAGGATTCACACAGGAGACAGGCCTTATAAATGCGAACATTGTGATGAAAGATTCATATCGGCTTCTAGAAGATTGGATCATGTTAAAAGGCGGCATAAGAGTGTTAAAACTATGTTGCATTGTTGCAAGCTGTGTAAAGCTTCGTTTGTACAAGAAGACGTTTGTTGTCCTCTAGGAGCATGCGTAACGTGCGCGAGCGCAGCCCTCGCTGCGCAAGAGTTCCGCCTATTCGTCAGAAATTCAGAACAACTGTGGCTCAAAGCCATCGCCAATCTCACAGACTTAAATTACACAGATCATGAAGACACTCTCCTCCCAGTCAAGTCCATCTGCGCGTTCGTGGCACAAAGCGACTTATCCATTCAAACTACTAAAGATTATACCGGTGATGACCCTGACGTAGTCGTCAACAGGTCAAAAGGCTTCAAAAAACACAAAAGAACAAGGACCCCTCGCGGTGGACCTATTATTTCGTGTCCGGACTGCCACAAAACATTCACAACTCCCTACTTTCTTCAAATACATTTAAAAAACAGCGGCCAAAAAGATGCCTGTCCCATTTGCGGGGAGACTACTTTACGAGGGCTTGCAATGAAAGAGCATATGTCTAAAAAACATAAACTGAACGCGCTTTTATGTACCAAATGTCCAGCACTGTTTATGAAAGAAATTGACTTTGCTAAGCATACCAAAAAAGCTCATAGTCCAGGCGCTTTAACCTGTTCGGACTGTGGCAGGTCCTTTCCTAGGTTGTCTTCATTTGAGCATCATTTTCAAATGCACACAGTCAGCACTTGTAGAAACTGCGGAGCTCAATTTACTAATAGGAGTTGCTATCGAGAACATAGGAATAAGTGCGAACCAGATGCAAAGCCTGACGCCAAAAACGTGCCGAGAAGTAGACGAACGAACAACCGTGACCCTGCAGTGTTTATATGCGACTATTGCAATAAAACTTACTCTACCAGACCTCAGTTAAAGAATCATATAATATGGATTCATATGGACGTGCGACCTCATCAGTGTCAGTGGTGCGGAAAGAGGTTTTATACGTCGGGGAGACTGGCTGAACACACAGTGGTTCATACGCGCGCGCGGAATTTCGAATGTGACATTTGTGGCGCGAAATTAGTTTCCAAGATGGCGGTAGTTTACCACAGACGGCGTCACACGGGCGAAAAGCCTTATAAATGTGAAGATTGCGACGCTTCTTTCATATCTTCTTCTAGAAGGTTAGAACACGCTAAGAGGAAGCATAATAAAGGAGTTAAATTCGCTTGTCCACATGTGTCGTGTACGGCTAGTTTTGTGCGCAAGAGTGAGCTGAATAAACATTTGACTAAGCCTCACGACTCTGAAAAGGAAAGCGCTAAAGGTTGGACGGTAGCCTATGACAAGAAAGTCGAACCGATTTTGCAAAATTGA
- Protein Sequence
- MRKKHYGADPELYKKVDNGPELPPTLCKTCSEAVTQTAQFIQFCKLSAQHWEYSLNYLDTHDPADEDKTFFLFYKDQTVHTLTSTVRSVERAADFLNKKKKENRKNLSHCNCPAPHQGEEEQGKKRRKKNCPHCGMLFPCLETLNSHIKYTLKSVCLICGLIINKKELPKHLSEKHGDVVVPCPFCNELFSSFDEANNHVASDHGPTSYNCQICGRGYSNKRGLISHTSRHALHSCFCGKSFENLRCYNYHTSKCKVPKKKPKNSDCSYECDYCGAKYDVKQSLKMHIMHKHLYIQPFVCHICGKRTNTVSALRSHQETHKKERKTIDCEFCGAKFRSGLGHKLHLRIHTGDRPYKCEHCDERFISASRRLDHVKRRHKSVKTMLHCCKLCKASFVQEDVCCPLGACVTCASAALAAQEFRLFVRNSEQLWLKAIANLTDLNYTDHEDTLLPVKSICAFVAQSDLSIQTTKDYTGDDPDVVVNRSKGFKKHKRTRTPRGGPIISCPDCHKTFTTPYFLQIHLKNSGQKDACPICGETTLRGLAMKEHMSKKHKLNALLCTKCPALFMKEIDFAKHTKKAHSPGALTCSDCGRSFPRLSSFEHHFQMHTVSTCRNCGAQFTNRSCYREHRNKCEPDAKPDAKNVPRSRRTNNRDPAVFICDYCNKTYSTRPQLKNHIIWIHMDVRPHQCQWCGKRFYTSGRLAEHTVVHTRARNFECDICGAKLVSKMAVVYHRRRHTGEKPYKCEDCDASFISSSRRLEHAKRKHNKGVKFACPHVSCTASFVRKSELNKHLTKPHDSEKESAKGWTVAYDKKVEPILQN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -