Haes015080.1
Basic Information
- Insect
- Hemithea aestivaria
- Gene Symbol
- Zbtb9
- Assembly
- GCA_947507615.1
- Location
- OX382350.1:3604872-3620188[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2.7e-05 0.0021 19.0 0.8 2 23 12 34 11 34 0.96 2 19 0.15 12 7.3 2.2 1 23 40 62 40 62 0.98 3 19 3.6e-06 0.00028 21.8 4.0 1 23 68 90 68 90 0.98 4 19 5.3 4.1e+02 2.4 0.2 6 23 246 264 244 264 0.90 5 19 0.16 12 7.2 0.5 2 23 291 313 290 313 0.94 6 19 1.1 83 4.6 0.6 2 23 336 357 335 357 0.96 7 19 0.012 0.9 10.7 0.1 1 23 361 383 361 383 0.97 8 19 8.3e-05 0.0065 17.5 3.4 1 23 388 410 388 410 0.98 9 19 0.045 3.5 8.9 0.3 1 23 415 438 415 438 0.91 10 19 1.6e-05 0.0012 19.7 2.6 1 23 444 467 444 467 0.98 11 19 0.15 12 7.2 0.1 1 23 473 495 473 495 0.96 12 19 1.5e-06 0.00012 22.9 2.9 1 23 501 523 501 523 0.98 13 19 0.022 1.7 9.9 1.1 1 23 712 735 712 735 0.94 14 19 0.00058 0.045 14.8 0.1 2 23 762 784 761 784 0.95 15 19 2.4 1.9e+02 3.4 2.8 2 23 807 828 807 828 0.97 16 19 0.00035 0.028 15.5 1.1 1 23 832 854 832 854 0.97 17 19 0.018 1.4 10.2 3.6 1 23 859 882 859 882 0.95 18 19 4 3.1e+02 2.8 2.1 2 12 890 900 889 907 0.90 19 19 0.012 0.92 10.7 3.8 3 23 921 941 919 942 0.92
Sequence Information
- Coding Sequence
- ATGGCGTCAGCGCACGGCGCTAAATATGAGATGAAATGTCCGAGTTGTGATAGAATTTTCAGTAATAGGTATGCGCTGAGGGCGCATAAGAAACGAGACCATTTGAAAGTTCGTAGATTCAGCTGCGACCAGTGTGGTAATAGGTACTTCTCTAAAGTAGAGAAAGATCACCACATGGCGACTCACACGGACGTGAGAGACTTTTCGTGTGAGGTATGCAGTAAAGCATTCAAATTGAAGAAGCATTTGACGCAACATATGCGAACGCACGCGCACGATAAACCGAGTAGATCTATGAAAATGGTCAACGATCAAAATGAATACATTGGTATCATAAGTACCATCGCTGACCACGAAATAGAGAAATACGTGGACAATGGAGTAAGTCTACCAAAGCTACCTGAACTGGTAATAACCCGTGTAAAAGGCAAAACTGAATCAGTCAAAGTACAACCTGAATCAGTCAAAGTACAAACTGAATCAGTCAAAGTACAACCTGAATCAGTCAGAGTACAACCTGAATCAGTCAAAGTACCACCTGAATCAGTCAAAGTACAACTTGGATCGACAAAAGCCGAAAGGAATATCAAAGAGAAAAAGGAAGATCAAAAAGAAATTCTCGAAAAACCTATTTTGACGATCCAAAAACATCGGTACAACGCGCGTGCAATCCTGCAATATTCTAACGCTACTCCAATAGTGTCCCACTACCCAGGAACAGGCTTTGATTGCCTCTGTGGAAAATTCTTCCTTAAAGGGAGGGACCTTAAAGCCCATATACTTGAAATCCACAACGATCACAAGCTCAAGTTTTTAAATGAAAGGATTTATATAAATCAATATTCAGTGAAACTAGACATTGCAGACTTGCACTGCAGCATCTGCAAAATGGAGTTTAACCTAATAGAGGAGCTGATCGATCATTTGAACCAAACCCACGACAAGGGGTTGTACACGGATATCAAGAGCCGTATAATTTGTTTTAAGCTCGATGGCGAGTCGTCGAAATGCATGTTCTGTCAGACAGAATATAAAGCATTTAGAGCGTTAGTGATGCACATGAACGAGCATTACAGAAACTATATATGTGAAGTGTGCGCGGCTGGTTTTGTCAACCAAACGCTTCTTAAGGTTCATTCGACAACGCATGTTATTGGTGAATTCAAATGCCGCTATTGCGACAAAGTATGTGCAACGCAAAACAAATTAACGTGGCACGTAAAGTCACATACGAAACCGGAGTATGCTTGTATTCAATGTGGGGAGAAATTTAAAACGGTCTCGCTTAGAACGAATCACTTGATGTCTGCGCACGGCGCTAAATACGAGTACAAGTGCCCTTATTGCAGTAAGGTGTTTACAAGCAGGGGTACGTGGAAGTCGCACAAGAAACGGAATCATTTCAGAGAACTAAAGTATGTTTGCGATAAATGTGATATGGGGTTCCTCACTAAAACAGAGAAAGATGCTCACATGGCTATTCACATGGATGTCAGAAACTTTTCGTGTGAGATATGCGGTAAAGCTTTTAAGCTGAAGAAACATGTGACGCAGCATATGCGGACGCATAATAAACCGAGTCGTTCTGTGAAAAAGGAGAACGATCTGTGCGAGAATTCCAGCGACGATTCCCGTCGAAGCAGCAGCGAAGAAAGCGATACACCACTGATATTCGTTGAAACCAACCGTCTAACACTCGATAGGAAAGTCAATTTTACTTCCTTCATCTCCATCCTACCTGCCGGCGTAAAGAAAAGACACGAGGAAAAGAAAAAGACAGAAAAGCGGAAGGAAAAAGAGATACACGAGGAAATCTTCGAACCTTTGGACTCTGAGCCTATTATTATGTCAGATATTGAAGAACCGCCTCCTCCGCCTAAAAAACGCAAGACGAAAACTACTCGTCCCAAACAAACCCAGAAGATCAGAATAAAGAAGGAAGACGCGCCAAAGATCACAGTGAGAAAGAGACGAGTAATCACCATTGCACCAGAAGAAGGGAATATTGAACCGGAAGGGAAGGTTCAGATCGTGTTCAAAAAGTGCGCCGAACTTAGCAAGCATAAAGTTAATATAAGGACGATCCTGCTATACTCCAACGCAACCCCGATCCGTCGGTACGGCGGCGTGGGGTACATGTGCTGCTTCTGTCCCATGCAGTTCACTGAAGCTGGTCTACTCAAGGCACACACTTTACAGACTCACGGCGATTCAGAGAAGAAAGTGTTCCTACGAACTCAAACGCTCCCCGGATTTGTcgtcaaattagacatcaccgatttaacctgcaacatttgcaatactcctttcacagttctcgatgatttcactacacatatcgcatctttacacaacaaaacattttacacagatataaaaagccacataattcctttcaaattcgacaacgacctacccaaatgcgttgtttgctcaaataagttcaacaacttcaaaattctgcatcaacacatgaatgttcattttagaaatcatgtgtgcgagatttgtggccgcggtttcgtcaatttaaaagttttccagactcatatgtacaggcataacactggggtctttaagtgcaacatttgcgagaaagtttttgacactaaaattaaatgtaaagaccacgaaaggtcgacccataaattgttgaataaaagaaataaatgcgcgtattgtggggagaagtttaatgattatgtcaagaagaattgtcatgaggttaaggtgcatggagctaaaccgattgtgttgcattgtttggcttgcaataggacttttgataaccagcgcgcgttgactgtgcatactaagtctcaccatttgatggagaAACGGGTTCCTAAGTAA
- Protein Sequence
- MASAHGAKYEMKCPSCDRIFSNRYALRAHKKRDHLKVRRFSCDQCGNRYFSKVEKDHHMATHTDVRDFSCEVCSKAFKLKKHLTQHMRTHAHDKPSRSMKMVNDQNEYIGIISTIADHEIEKYVDNGVSLPKLPELVITRVKGKTESVKVQPESVKVQTESVKVQPESVRVQPESVKVPPESVKVQLGSTKAERNIKEKKEDQKEILEKPILTIQKHRYNARAILQYSNATPIVSHYPGTGFDCLCGKFFLKGRDLKAHILEIHNDHKLKFLNERIYINQYSVKLDIADLHCSICKMEFNLIEELIDHLNQTHDKGLYTDIKSRIICFKLDGESSKCMFCQTEYKAFRALVMHMNEHYRNYICEVCAAGFVNQTLLKVHSTTHVIGEFKCRYCDKVCATQNKLTWHVKSHTKPEYACIQCGEKFKTVSLRTNHLMSAHGAKYEYKCPYCSKVFTSRGTWKSHKKRNHFRELKYVCDKCDMGFLTKTEKDAHMAIHMDVRNFSCEICGKAFKLKKHVTQHMRTHNKPSRSVKKENDLCENSSDDSRRSSSEESDTPLIFVETNRLTLDRKVNFTSFISILPAGVKKRHEEKKKTEKRKEKEIHEEIFEPLDSEPIIMSDIEEPPPPPKKRKTKTTRPKQTQKIRIKKEDAPKITVRKRRVITIAPEEGNIEPEGKVQIVFKKCAELSKHKVNIRTILLYSNATPIRRYGGVGYMCCFCPMQFTEAGLLKAHTLQTHGDSEKKVFLRTQTLPGFVVKLDITDLTCNICNTPFTVLDDFTTHIASLHNKTFYTDIKSHIIPFKFDNDLPKCVVCSNKFNNFKILHQHMNVHFRNHVCEICGRGFVNLKVFQTHMYRHNTGVFKCNICEKVFDTKIKCKDHERSTHKLLNKRNKCAYCGEKFNDYVKKNCHEVKVHGAKPIVLHCLACNRTFDNQRALTVHTKSHHLMEKRVPK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -