Basic Information

Insect: Hemithea aestivaria
Gene Symbol: -
Assembly: GCA_947507615.1
Location: OX382350.1:3356150-3360045[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.43 33 5.8 0.9 3 23 2 23 1 23 0.93

2 25 0.17 13 7.1 0.7 2 23 51 73 50 73 0.93

3 25 0.00074 0.057 14.5 1.4 2 23 96 117 95 117 0.97

4 25 0.0005 0.039 15.0 1.4 1 21 121 141 121 142 0.94

5 25 0.00048 0.037 15.1 0.1 1 23 177 200 177 200 0.95

6 25 0.17 13 7.1 0.6 1 12 207 218 207 221 0.91

7 25 0.23 18 6.6 0.2 2 23 297 319 296 319 0.94

8 25 1.6 1.2e+02 4.0 0.1 3 23 345 365 343 365 0.94

9 25 0.0066 0.51 11.5 0.6 1 23 369 392 369 392 0.96

10 25 0.16 13 7.1 0.3 3 22 398 417 397 417 0.97

11 25 0.0046 0.36 12.0 3.1 1 23 424 447 424 447 0.96

12 25 0.00092 0.072 14.2 1.8 1 23 454 477 454 477 0.93

13 25 0.057 4.4 8.6 2.6 1 23 482 504 482 504 0.94

14 25 0.49 38 5.6 1.1 3 23 558 579 557 579 0.95

15 25 0.42 33 5.8 0.3 2 23 604 626 603 626 0.93

16 25 0.2 16 6.8 0.1 3 23 651 671 649 671 0.95

17 25 0.00026 0.02 15.9 0.7 1 21 675 695 675 696 0.96

18 25 0.065 5.1 8.4 0.2 1 23 737 760 737 760 0.97

19 25 0.18 14 7.0 1.7 2 23 786 808 785 809 0.95

20 25 0.0042 0.33 12.1 0.4 2 23 832 853 831 853 0.94

21 25 0.0049 0.38 11.9 0.0 1 23 857 880 857 880 0.97

22 25 0.67 52 5.2 0.7 1 23 884 907 884 907 0.97

23 25 7 5.4e+02 2.0 0.3 1 23 912 937 912 937 0.87

24 25 0.00045 0.035 15.2 4.0 1 23 946 969 946 969 0.97

25 25 0.00014 0.011 16.7 0.5 1 23 979 1002 979 1002 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.43	33	5.8	0.9	3	23	2	23	1	23	0.93
2	25	0.17	13	7.1	0.7	2	23	51	73	50	73	0.93
3	25	0.00074	0.057	14.5	1.4	2	23	96	117	95	117	0.97
4	25	0.0005	0.039	15.0	1.4	1	21	121	141	121	142	0.94
5	25	0.00048	0.037	15.1	0.1	1	23	177	200	177	200	0.95
6	25	0.17	13	7.1	0.6	1	12	207	218	207	221	0.91
7	25	0.23	18	6.6	0.2	2	23	297	319	296	319	0.94
8	25	1.6	1.2e+02	4.0	0.1	3	23	345	365	343	365	0.94
9	25	0.0066	0.51	11.5	0.6	1	23	369	392	369	392	0.96
10	25	0.16	13	7.1	0.3	3	22	398	417	397	417	0.97
11	25	0.0046	0.36	12.0	3.1	1	23	424	447	424	447	0.96
12	25	0.00092	0.072	14.2	1.8	1	23	454	477	454	477	0.93
13	25	0.057	4.4	8.6	2.6	1	23	482	504	482	504	0.94
14	25	0.49	38	5.6	1.1	3	23	558	579	557	579	0.95
15	25	0.42	33	5.8	0.3	2	23	604	626	603	626	0.93
16	25	0.2	16	6.8	0.1	3	23	651	671	649	671	0.95
17	25	0.00026	0.02	15.9	0.7	1	21	675	695	675	696	0.96
18	25	0.065	5.1	8.4	0.2	1	23	737	760	737	760	0.97
19	25	0.18	14	7.0	1.7	2	23	786	808	785	809	0.95
20	25	0.0042	0.33	12.1	0.4	2	23	832	853	831	853	0.94
21	25	0.0049	0.38	11.9	0.0	1	23	857	880	857	880	0.97
22	25	0.67	52	5.2	0.7	1	23	884	907	884	907	0.97
23	25	7	5.4e+02	2.0	0.3	1	23	912	937	912	937	0.87
24	25	0.00045	0.035	15.2	4.0	1	23	946	969	946	969	0.97
25	25	0.00014	0.011	16.7	0.5	1	23	979	1002	979	1002	0.97

Sequence Information

Coding Sequence: ATGTGCGTCTACTGCTGCGAATCCTATCGGGATCCAGAAAAGTTTCGAATGCATATGGAGGAAGAGCACAACGAGTTTAAGTCTCAATACGCTTTCCTGCACATGAGTGGAATGAACGCAGGATACCTTAAAGTAGACATCACCGACTTGCGTTGTCGTATCTGTGATGAAAGGTGCAACAGGCTCGAAGAAATCGCCGAGCATTTGAAAGATTCGCACTCCTTACCCATAGATACCGACTACGAACTAGGATTGCTTCCGTATCGCTTGGAAAAAAGCGGATTGTCATGTCCGACTTGTCACGAAAGATATCCCAACTTGCGCTCACTAAGCAAGCACGTACAAACTCACTTTCATAAATATATTTGCGAGCACTGCGGCAAAGCGTACACTACTCATACGTCTTTGAGTTACCACGTTAAGAATAATTGTACTTTAAACAGTCATTATACACGCCGGTGTAGAAAATGTAGAGTACCTATCACTTCTCTAGAAGAACACATGAAAACTTCGGTGAGATGCAAGTCATATATTTGCAACGTGTGCGGAGAAAGATTCACTTATTGGAAAGAGAAACAAGACCACTTGGAGGTGGTACACGATAAACCGACGCTCAGCTTCAAGTGTACTGAATGCGACCAAATCTTCAAAAACGAAGGCCGCATACAAGCGAGACGGAACGCAGAACTTGTGGTAAAATTGTCAACAATATACCCATTCAGAATGCAAGGAAAAAAGCTTATTTGTGTCTTCTGCTGCGATGAATATGAAGATCCTGAAGAATTCCGAGCGCACATGGACAATAATCATAAGAAATTTAATATATCGACGGCTTTTGCTCATGCTGGCCGGAATAAGGACTATCTCAAAGTAGACTGCATCGACATGAAGTGCAAACTCTGTTGGCAACCTTTAGACAAACTCGAGGATCTAGCGAAACATCTCAACGATACCCACTTAATAAGTGATAAATTAAATTTGGAGTACGAAATAGCCCTGCATCCTTACAAGCTGTACAAAGACAAATGGGATTGCGTCATTTGCAACGCGAAAATGCCCAGTCTCGTCAAGTTGGGGCGGCACATGTCGACACATTACGCTCAGTTCACATGCGATACCTGCGGACGAATCTACTTGTCCATCGACAGTTTGAACCATCACATTAGAGCAAGTCATTCTGGCAAAATATTATGCAGAAAATGTTGGCAAGAGTTTCCCACTTCTGATGAGAAGAAAGAGCATCTGAGGACTTCTGTAAAATGTCGGCCGTTCGTCTGCGTTCATTGCGGCGAGAGATTTGCTTCGTGGGAATACAAGCATAAACATCAGGTCACTTTCCATGACGCTCCGGAAAGAACGTATCGGTGTCCGGAATGCGATGCAGTATTTCAAAATAGGAAACATTTCTATAATCATTATTCAGCGGAACATGCACACGGCCGTTTTACGTGCACCTGCTGCGACCGATCGTTTAATAATAAAAACGCGTTGGATGATCATAAACTAGGGCATACCGGGGCCGTATTGGAAATACGCGGACATAGTGAGAGTGAAAATGACCCAAAAAAGAAAGTTGTTCTTGTGTGCCAGTCGTCACAACGGCGAAATGCCGAACTTATTCTTAAATTCTCTACTGCTTACCCTTTCAAAACTAGGTTTAGTCAAATTCTTTGTGCTTTTTGTCACGACCAATACAACACATTGCCTGACTTGAGGTATCACATGAAAACTGAACATATTCATTCTGACTTTAAAAATGTCTTCTACAGGAATAGTGATAATTTGATTAAGGTAGACATATCGGAATTGAAATGTAAGATTTGCTCCTTAGACTTATCAGATATCGATACCCTAATGTCACACTTTTCAAAAGAACATCAGAAGCGAGTCAATTTCAACGAGCGTTTTGGGGTGCTCCCTTATAAGCAGAATGAAGAGAACCAGTGGATATGTGTCTATTGTCAGCGAGTTCTGGTAGAATTCGTGGCGTTCAAACGTCATATAGTTACTCACTTTATGCAGTACACGTGTGACAAGTGTGGTACCAGCTTCGTCTCAGACTATGCACTGAGAGACCATCACCGCCAGGTCAAGTGTTTCAGAACGGAGTACCATCCTCGTAACGGCAAAATCATGACATCCCGAAACAATGCAGAAATTATTTTACAATGCTCCACCGCTTGCCCTTTTCGAACTTGGAAGAATAACTTTAGTTGCGTCTTCTGTCGTTTGCAATCAAACGATCCCACCGCATTGAGAATTCATATGGCTACACGCCATAATAACTTTGACGTGCAGGCAGCATTCTATAAGAAATTAGGTAAAGATTTCCTTAGCGTAGATGTGACTGACTTGCAATGTAAACTGTGTTTCATGTCTGTACCCACTTTTGATACGTTAACTTATCATTTGAAGAACGAACACCACCAGCCGATCAACTTGGACGCGCAGCTCGGCGTCTTACCGTTTAGATTGAACGATGGTTCAATATGGAAGTGCACAATATGCCCCAACGAATTCAAAGATTTCATTTCATTAAAGAAACACACAGCTGAACATTTTCAGAATTACGTGTGTGACGCTTGCGGGGAAGGGTTTATAACAGAGTCAGCGATGGTCGCACACACTAAAATACCCCACGGCAACAAATACAACTGCAGTCGATGTATCGCCACTTTCTCTACGTTGGACGAGAGGAATCTCCATGTCAAAACTCAACATACTTCCACGCCTTACATGTGCATGTACTGTACAGATAAACCACGATTCGCTAACTGGGAATTACGGAAGAAGCATCTAATGGAAGTGCACAATTACAAGACTGGTCCCGATAAATACGAGTGCACTACATGTCAGAAAACGTTCAAAACTAGGTCTGGGAAATTCAACCACATGACGAGAACTCACAGGATGAGAAGAGAAGCAGAACTTAACTACCCATGCCCAAGTTGCCCTAAAGCCTTTACAACCAAATTGTTCCTAGATAAACATATGGCCAAGAAGCATTTTGATTCGTAA
Protein Sequence: MCVYCCESYRDPEKFRMHMEEEHNEFKSQYAFLHMSGMNAGYLKVDITDLRCRICDERCNRLEEIAEHLKDSHSLPIDTDYELGLLPYRLEKSGLSCPTCHERYPNLRSLSKHVQTHFHKYICEHCGKAYTTHTSLSYHVKNNCTLNSHYTRRCRKCRVPITSLEEHMKTSVRCKSYICNVCGERFTYWKEKQDHLEVVHDKPTLSFKCTECDQIFKNEGRIQARRNAELVVKLSTIYPFRMQGKKLICVFCCDEYEDPEEFRAHMDNNHKKFNISTAFAHAGRNKDYLKVDCIDMKCKLCWQPLDKLEDLAKHLNDTHLISDKLNLEYEIALHPYKLYKDKWDCVICNAKMPSLVKLGRHMSTHYAQFTCDTCGRIYLSIDSLNHHIRASHSGKILCRKCWQEFPTSDEKKEHLRTSVKCRPFVCVHCGERFASWEYKHKHQVTFHDAPERTYRCPECDAVFQNRKHFYNHYSAEHAHGRFTCTCCDRSFNNKNALDDHKLGHTGAVLEIRGHSESENDPKKKVVLVCQSSQRRNAELILKFSTAYPFKTRFSQILCAFCHDQYNTLPDLRYHMKTEHIHSDFKNVFYRNSDNLIKVDISELKCKICSLDLSDIDTLMSHFSKEHQKRVNFNERFGVLPYKQNEENQWICVYCQRVLVEFVAFKRHIVTHFMQYTCDKCGTSFVSDYALRDHHRQVKCFRTEYHPRNGKIMTSRNNAEIILQCSTACPFRTWKNNFSCVFCRLQSNDPTALRIHMATRHNNFDVQAAFYKKLGKDFLSVDVTDLQCKLCFMSVPTFDTLTYHLKNEHHQPINLDAQLGVLPFRLNDGSIWKCTICPNEFKDFISLKKHTAEHFQNYVCDACGEGFITESAMVAHTKIPHGNKYNCSRCIATFSTLDERNLHVKTQHTSTPYMCMYCTDKPRFANWELRKKHLMEVHNYKTGPDKYECTTCQKTFKTRSGKFNHMTRTHRMRREAELNYPCPSCPKAFTTKLFLDKHMAKKHFDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -