Basic Information

Insect: Hemithea aestivaria
Gene Symbol: -
Assembly: GCA_947507615.1
Location: OX382350.1:3597609-3604554[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 28 0.013 1 10.6 0.2 1 23 120 143 120 143 0.94

2 28 0.19 15 6.9 0.6 2 23 169 191 168 191 0.94

3 28 1.3 1e+02 4.3 0.1 2 23 214 235 213 235 0.95

4 28 0.23 18 6.7 0.0 1 23 239 261 239 261 0.95

5 28 0.00027 0.021 15.9 4.2 1 23 266 289 266 289 0.97

6 28 2.9 2.3e+02 3.2 0.3 5 23 298 317 296 317 0.91

7 28 2.9e-05 0.0023 18.9 1.4 2 23 324 346 323 346 0.97

8 28 0.11 8.3 7.7 1.7 1 23 352 374 352 374 0.97

9 28 0.033 2.6 9.3 6.1 1 23 380 402 380 402 0.96

10 28 0.003 0.23 12.6 0.1 1 23 512 535 512 535 0.93

11 28 0.025 1.9 9.7 0.4 1 23 632 655 632 655 0.96

12 28 0.4 31 5.9 0.4 2 23 681 703 680 703 0.94

13 28 0.73 57 5.1 0.1 2 23 726 747 725 747 0.96

14 28 2.4 1.9e+02 3.5 0.0 1 23 751 773 751 773 0.93

15 28 0.00033 0.026 15.6 2.1 1 23 778 800 778 800 0.98

16 28 1.2 97 4.3 0.4 5 23 811 830 809 830 0.92

17 28 4.1e-05 0.0032 18.5 0.8 2 23 837 859 836 859 0.96

18 28 0.038 3 9.1 2.2 1 23 865 887 865 887 0.98

19 28 5.3e-06 0.00042 21.2 4.0 1 23 893 915 893 915 0.98

20 28 7.8 6.1e+02 1.8 0.2 6 23 1054 1072 1052 1072 0.90

21 28 0.11 8.3 7.7 0.4 2 23 1099 1121 1098 1121 0.94

22 28 1.1 82 4.6 0.4 2 23 1144 1165 1143 1165 0.96

23 28 7.3 5.7e+02 1.9 0.1 1 23 1169 1191 1169 1191 0.89

24 28 2e-05 0.0015 19.5 1.1 1 23 1196 1218 1196 1218 0.98

25 28 1.2 94 4.4 0.2 1 23 1223 1246 1223 1246 0.87

26 28 0.0031 0.24 12.5 4.2 1 23 1252 1275 1252 1275 0.94

27 28 0.88 68 4.8 0.1 1 23 1281 1303 1281 1303 0.89

28 28 2.3e-06 0.00018 22.4 2.9 1 23 1309 1331 1309 1331 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	28	0.013	1	10.6	0.2	1	23	120	143	120	143	0.94
2	28	0.19	15	6.9	0.6	2	23	169	191	168	191	0.94
3	28	1.3	1e+02	4.3	0.1	2	23	214	235	213	235	0.95
4	28	0.23	18	6.7	0.0	1	23	239	261	239	261	0.95
5	28	0.00027	0.021	15.9	4.2	1	23	266	289	266	289	0.97
6	28	2.9	2.3e+02	3.2	0.3	5	23	298	317	296	317	0.91
7	28	2.9e-05	0.0023	18.9	1.4	2	23	324	346	323	346	0.97
8	28	0.11	8.3	7.7	1.7	1	23	352	374	352	374	0.97
9	28	0.033	2.6	9.3	6.1	1	23	380	402	380	402	0.96
10	28	0.003	0.23	12.6	0.1	1	23	512	535	512	535	0.93
11	28	0.025	1.9	9.7	0.4	1	23	632	655	632	655	0.96
12	28	0.4	31	5.9	0.4	2	23	681	703	680	703	0.94
13	28	0.73	57	5.1	0.1	2	23	726	747	725	747	0.96
14	28	2.4	1.9e+02	3.5	0.0	1	23	751	773	751	773	0.93
15	28	0.00033	0.026	15.6	2.1	1	23	778	800	778	800	0.98
16	28	1.2	97	4.3	0.4	5	23	811	830	809	830	0.92
17	28	4.1e-05	0.0032	18.5	0.8	2	23	837	859	836	859	0.96
18	28	0.038	3	9.1	2.2	1	23	865	887	865	887	0.98
19	28	5.3e-06	0.00042	21.2	4.0	1	23	893	915	893	915	0.98
20	28	7.8	6.1e+02	1.8	0.2	6	23	1054	1072	1052	1072	0.90
21	28	0.11	8.3	7.7	0.4	2	23	1099	1121	1098	1121	0.94
22	28	1.1	82	4.6	0.4	2	23	1144	1165	1143	1165	0.96
23	28	7.3	5.7e+02	1.9	0.1	1	23	1169	1191	1169	1191	0.89
24	28	2e-05	0.0015	19.5	1.1	1	23	1196	1218	1196	1218	0.98
25	28	1.2	94	4.4	0.2	1	23	1223	1246	1223	1246	0.87
26	28	0.0031	0.24	12.5	4.2	1	23	1252	1275	1252	1275	0.94
27	28	0.88	68	4.8	0.1	1	23	1281	1303	1281	1303	0.89
28	28	2.3e-06	0.00018	22.4	2.9	1	23	1309	1331	1309	1331	0.98

Sequence Information

Coding Sequence: ATGCAAAATAGGAATAAATTTGAAGAAAAGATCGGAAGAACACACCTACACGTAACTAGTCCAGACACAAAACTATGTGAACTGAGTATCGTAAGTACCATCGCTGACCGCAAAATAAAGAAAGAAATGGATGATGAGGAAAGTGTACCAAAGCTGCCTGAAGTGGTATTAATCCCGGCTAAAGCAAAAGTTAAACTAGCCAAAGCCAAACCGAAATTGATTAAAAAGAAAAAAAATGTCAAGGAGAAAGTCCCTGAAAAACATATTCCTACGATCCACAAACATCGTTACAACGCACAAACGATCTTGCAATATTCTAATGCTACCCCCATAGGGGCAAATTACCCTGGAACGGGTTTCGCTTGCGGACTTTGTGGACAATTCTTCCCTAAAGGGAGGGACCTAAAATCCCATATACTCGAAAAACACGGTGATAATAAGCTCAAGTTCTTGAAAAAGACTTCTCTCCCGGATTACACGATGAAACTAGACATTACAAACTTGCATTGCAGCATCTGCAAAATGGAGTTTAACTTGATGGAAGAACTGATCGATCATTTGAACCAAACGCACGACAAACGATTGTTCACAGATATCAAGAACCAGATAGTTTGCTTCAAACTAGACGGGGACGTGCTGAAATGCATGTTTTGTCAAGTTGAGTTTATCGCCTTTAGAGCGTTACTGATACACATGAATGAGCATTACAGAAATTACATTTGTGAGGTTTGCGCGGCTGGTTTTGTGAATCAAACGTTCCTCGATAAACATGCGCAAGGGCATGTCATCGGCGAATTCAAATGTCGTACTTGCGACAAAGTATGCGAAACGAAAAGCAAACTAAAGTGGCATGAAAGATCGTCGCATACCAACCCCAAGTTTGGTTGTATACAATGTGGGGAGAAATTTAGGACGGGGAAGCTGAGGATGGATCATATGGCGTCAGCGCACGGTGCTAAATACGAGATCAAGTGTCCGAACTGTGATAGGAAGTTTAATAATAGAACAACGCTTTGGGCGCATAAAAGACGGCAGCATTTACAGGATAGAAGATTCGCTTGCGAACAGTGTGATATGAGGTTCTTCTCTAAAATTGAGAGAGATCACCACATGGTAACTCACACGGATGTGAGAGAGTTTTTGTGTGAGATATGCTGTAAAGCCTTTAAATTGAAGAAGCATGTGAGACAGCATATGCGGACACACGCGCATGATAAGCCGAGTCGATCTATGACAGTTGTGGATAATCATAGTGAATATTCTGGTATCGTATGTACCATCGATGACCACATAATAAAGAAAGAAGTGGACGATGAGGCAAGTGTTCCAAAGCTGCCTGAAGTGGTATTAATCCCTGTAAAAGACAATGTTAAATCAGTCAAAACAGAACCTGAAACAAAAGAGAGACAGATTGACGAAAAGATTGCCGTCGAAAAACAAACTCCTATGATCCATAAACATCGGCATAATGCATATATGATCCTGCAGTATTCTAACGCTACTCCGATAGGGGCCAACTACACCGGAACAGGCTTTGCTTGCGGACTTTGTGGAAAATTCTTCCCTAAAGGGAGGGACCTCAAATCCCATATAATTGAACAACACAACGATGACAAGCTGAAGATCGGTATCGTAAGTACCATCGCTGATCACAAAATAAAGAAAGAAGTGGACGATGAGGCAAGAGTACCAAAGTTGCCTGAAGTGGTATTAATCCTGGCAAAAGACACTAAATCAGTCAAAATGGAACCTGACTCGATAAAAGAGAAGAAAATTGTCAAAAAGAATGTCGAAAAACCTGTTCCTTCAATCCAAAAACATCGTCACAACGCGCATTCCATCCTGCAGTATTCCAATGCTACTCCGGTTGGGGCTAACTACGCCGGAACGGGTTTTGCTTGCGGACTTTGTAAACAATTCTTCCCTAAAGGGAGGGACCTCAAATCTCATATACTTAAAGATCACAACGATGACAAGCTCAAGTTTTTGAGAAAGACATCTCTAGCAGACCACACAgtgaaactagacattgcggaattgcattgcagcatctgcaaaatggagtttaacattatagaagaactgatcgatcacttgaaccaaacgcacgataaaagattgttcacagatattaagaatcagatagtgtgtttcaaactcgaaggggatgtgttgaagtgcatgttttgtcaaatggagttcattgcatttagagcgttagttatacatatgaacgagcattacagaaattatatttgtgaggtttgcgcggctggttttgtgagtcaaaccatcctCGACAAACATATGGTAGCACATGTCACCGGCGAATTCAAATGCCGCATTTGTGACAAAGTATGCGAAACGAAAATCAAATTAAGATGGCACGCAAGGTTACACACTAACTCAAATCCTAAGTTCGGTTGTATTCAATGCGGGGAGAAATTTAAAACGGACACGCTCAGGAGGGATCATATGGCGTCAGCGCACGGCGCTAAATATGAGATGAAATGTCCGAGTTGTGATAGAATTTTCAGTAATAGGTATGCGCTGAGGGCGCATAAGAAACGAGACCATTTGAAAGTTCGTAGATTCAGCTGCGACCAGTGCGGTAATAGGTACTTCTCTAAAGTAGAGAAAGAGCACCACATGGCGACTCACACGGACGTGAGAGACTTTTCGTGTGAGGTATGCAGTAAAGCGTTCAAATTGAAGAAGCATTTGACGCAGCATATGCGAACGCACGCGCACGATAAACCGAGTCGATCTATGAAAATGGTCAACGATCAAAATGAATACTTTGGTATCATAAGTACCATCGCTGATCACGAAATAAAGAAATACGTGGAAAATGGAGCAAGTCTACCAAAGCTACCTGAACTGGTAATAACCCGTGTAAAAGGCAAAGCTAAATCAGTCAAAGTACAACCTGAATCAGTCAAAGTACAACCTGACTCAGTCAAAGTACAACCTAAATCAGTCAAATTACAACCTGAAACGGAAAAAGCCGAAAGGAATATCGTAAAGAAAAAGGAAGATCAAAAACAAATTCTCAAAAAACCTATCCAAAAACATCGGTACAACGCGCGTGCAATCCTGCAATATTCTAACGCTACTCCAATAGTGTCCCACTACCCAGGAACAGGCTTTGATTGCCTCTGTGGAAAATTCTTCCTTAAAGGGAGGGACCTTAAAGCCCATATACTTGAAATCCACAACGATCACAAGTTCAAGTTTTTAAATGAAAGGATTTCTATAAATCAATATTCAGTGAAAATAGACATTGCAGACTTGCACTGCAGCATCTGCAAAATGGAATTTAGCCTAATAGAGGAGCTGATCGATCATTTGAACCAAACCCACGACAAGGGGTTGTACACGGATATCAAGAGCCATATAGTTTGTTTTAAGCTCGATGGCGAGACGTCGAAATGCATGTTCTGTCAGACAGAATATAAAGCATTTAGAGCGTTAGTGATACACATGAACGAGCATTACAAAAACTATATATGTGAAGTGTGCGCGGCCGGTTTTGTCAACCAATTGCTTCTTAAGTTTCATTCGACAACGCATGTCATTGGTGAATTCAAATGCCGCTATTGCGACAAAGTATTTGCAAAGCAAAACAAATTAGCGTGGCACGTAAAGTCACATACGAAACCGGAGTATGCTTGTATCCAATGTGGGGAGAAATTTAAAACTATCACGCTTAGAACGAATCATTTAGTGTCTGCGCACGGCGTTAAATACGAGTACAAGTGCCCTTATTGCAGTAAGGTGTTTACAAACAGTGGTACGTGTAGGTCGCACAAGAAATGGAATCATTTCAAAGAACTAAAGTATGTTTGCGAAAAATGTGATATGGGGTTCCTCACTAAATCAGGGAAAGATGGTCACATGGCAATTCACATGGATGTCAGAAAGTTTTCGTGTGAGATATGCGGTAAAGCGTTTAAGCTGAAGAAACATGTGACGCAACATATGCGGACGCATAATAAACCGAGTCGTTCTGTGAAAAAGTCGAACGATCTGTGCGAGAATTCCAGCGACGGTTATATACTGGTGGTAGGCTATGATCAAGAATAG
Protein Sequence: MQNRNKFEEKIGRTHLHVTSPDTKLCELSIVSTIADRKIKKEMDDEESVPKLPEVVLIPAKAKVKLAKAKPKLIKKKKNVKEKVPEKHIPTIHKHRYNAQTILQYSNATPIGANYPGTGFACGLCGQFFPKGRDLKSHILEKHGDNKLKFLKKTSLPDYTMKLDITNLHCSICKMEFNLMEELIDHLNQTHDKRLFTDIKNQIVCFKLDGDVLKCMFCQVEFIAFRALLIHMNEHYRNYICEVCAAGFVNQTFLDKHAQGHVIGEFKCRTCDKVCETKSKLKWHERSSHTNPKFGCIQCGEKFRTGKLRMDHMASAHGAKYEIKCPNCDRKFNNRTTLWAHKRRQHLQDRRFACEQCDMRFFSKIERDHHMVTHTDVREFLCEICCKAFKLKKHVRQHMRTHAHDKPSRSMTVVDNHSEYSGIVCTIDDHIIKKEVDDEASVPKLPEVVLIPVKDNVKSVKTEPETKERQIDEKIAVEKQTPMIHKHRHNAYMILQYSNATPIGANYTGTGFACGLCGKFFPKGRDLKSHIIEQHNDDKLKIGIVSTIADHKIKKEVDDEARVPKLPEVVLILAKDTKSVKMEPDSIKEKKIVKKNVEKPVPSIQKHRHNAHSILQYSNATPVGANYAGTGFACGLCKQFFPKGRDLKSHILKDHNDDKLKFLRKTSLADHTVKLDIAELHCSICKMEFNIIEELIDHLNQTHDKRLFTDIKNQIVCFKLEGDVLKCMFCQMEFIAFRALVIHMNEHYRNYICEVCAAGFVSQTILDKHMVAHVTGEFKCRICDKVCETKIKLRWHARLHTNSNPKFGCIQCGEKFKTDTLRRDHMASAHGAKYEMKCPSCDRIFSNRYALRAHKKRDHLKVRRFSCDQCGNRYFSKVEKEHHMATHTDVRDFSCEVCSKAFKLKKHLTQHMRTHAHDKPSRSMKMVNDQNEYFGIISTIADHEIKKYVENGASLPKLPELVITRVKGKAKSVKVQPESVKVQPDSVKVQPKSVKLQPETEKAERNIVKKKEDQKQILKKPIQKHRYNARAILQYSNATPIVSHYPGTGFDCLCGKFFLKGRDLKAHILEIHNDHKFKFLNERISINQYSVKIDIADLHCSICKMEFSLIEELIDHLNQTHDKGLYTDIKSHIVCFKLDGETSKCMFCQTEYKAFRALVIHMNEHYKNYICEVCAAGFVNQLLLKFHSTTHVIGEFKCRYCDKVFAKQNKLAWHVKSHTKPEYACIQCGEKFKTITLRTNHLVSAHGVKYEYKCPYCSKVFTNSGTCRSHKKWNHFKELKYVCEKCDMGFLTKSGKDGHMAIHMDVRKFSCEICGKAFKLKKHVTQHMRTHNKPSRSVKKSNDLCENSSDGYILVVGYDQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -