Basic Information

Insect: Hemithea aestivaria
Gene Symbol: -
Assembly: GCA_947507615.1
Location: OX382351.1:7430145-7438522[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.032 2.5 9.4 0.5 5 23 183 201 180 201 0.94

2 12 0.0063 0.49 11.6 0.2 3 23 220 240 218 240 0.97

3 12 7.1e-05 0.0055 17.7 4.7 1 23 248 270 248 270 0.99

4 12 3.4e-06 0.00027 21.8 2.5 1 23 278 300 278 300 0.98

5 12 7.3e-05 0.0057 17.7 0.6 1 23 305 327 305 327 0.94

6 12 0.011 0.87 10.8 1.9 2 23 333 354 333 354 0.97

7 12 5.4e-08 4.2e-06 27.5 0.8 1 23 360 382 360 382 0.96

8 12 0.0004 0.031 15.4 0.2 1 23 388 410 388 410 0.99

9 12 7.1e-06 0.00056 20.8 0.4 1 23 416 438 416 438 0.98

10 12 0.00063 0.049 14.7 1.6 1 23 444 466 444 466 0.98

11 12 8.3e-06 0.00064 20.6 4.1 1 21 472 492 472 494 0.96

12 12 1.7e-05 0.0013 19.6 0.1 1 23 500 522 500 522 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.032	2.5	9.4	0.5	5	23	183	201	180	201	0.94
2	12	0.0063	0.49	11.6	0.2	3	23	220	240	218	240	0.97
3	12	7.1e-05	0.0055	17.7	4.7	1	23	248	270	248	270	0.99
4	12	3.4e-06	0.00027	21.8	2.5	1	23	278	300	278	300	0.98
5	12	7.3e-05	0.0057	17.7	0.6	1	23	305	327	305	327	0.94
6	12	0.011	0.87	10.8	1.9	2	23	333	354	333	354	0.97
7	12	5.4e-08	4.2e-06	27.5	0.8	1	23	360	382	360	382	0.96
8	12	0.0004	0.031	15.4	0.2	1	23	388	410	388	410	0.99
9	12	7.1e-06	0.00056	20.8	0.4	1	23	416	438	416	438	0.98
10	12	0.00063	0.049	14.7	1.6	1	23	444	466	444	466	0.98
11	12	8.3e-06	0.00064	20.6	4.1	1	21	472	492	472	494	0.96
12	12	1.7e-05	0.0013	19.6	0.1	1	23	500	522	500	522	0.98

Sequence Information

Coding Sequence: ATGGAAATAAATGTGGAAGCCTTCGACAGGATATGTCGCGCTTGCCTTACTCAATCCGGAAACATGAAATCATTGTTTACAAAACTGGAAGATGGTCATGTATTGTTGGATTTACTTGTTTTCACTATAAACACTGATGCTAATAGCTCAGACGGGCTTCCTAAACAGGTATGCGTTGATTGCGCGACATTTATACATAAAATAAGTGAATTTCGTCGGCGCTGCATCGAATCCGAGACTATTTTAAAAACTGTTTACCAAAACAGCTGTGATCAGTATTACGCCAAAAACGACTCAAATTCTAAAGAAAATGAAGTGAAAATAGATTTTATTGATAAATCAGACAATATAGTAGAGGAGATAGACAAACGTGATATTTCTGCTTTATTTCCCAATGAAATCCAATTCAAAAAGTTGGATGACCAAACATTTAAGACTGAAGTTGCAGTTGACGACGATTTTTCAGATAGTTTTGATGATAGAGAGTTTTTAATCGTGCCTGTAGAGCTCAAACATGAGAAATCTGATTTGAAAACTTACAAATGTGTGTGCGGGGAAGAATTTTCAAGCAAAACTGAATATAAAGAACACTCAAAACTGCATAACTGTAAGAAAAAGGTTAAGGTTGAAAAAACTGCATTGAACAGTGAAATTATATGCCAAAAGTGTAATTTAACATTTGATTTAGTTTCCGATTGGAACGAGCATCTAAAAACACATATATCAGAAGAAATAAGACAATTTCAGTGTTCGTTATGCCTCCGTAAGTTCAAAACTAAGAAAACATTGTCCAAACACATAAAAAGACACGAAAAAACGGACAACATAAAATATACTTGTCCGAAATGTAAGCGAGAGTTTAAATACAAATCATTCTTAGAAAGTCATATGCTATCACACTCAAATACGGAATATTTATGTGATTATTGTCCGGAAAGGTTTACAAATAAGAAATCATTGGAGCTACACAAAGATGTTCATAAGAAACGTAAGAATGTGTGTCCGTTTTGTGATAAGTCATTCCTTATGGTGTGTACCTTGAAGGATCATTTACGGACGCACACTGGAGAGAAGCCGTTCTTATGTTCAATATGCGGGAAGGGATTTAGCCAGAAGAATAATCTGGCTCAGCACATGAGACGGCATATGGGTGTGAAGCCTTTTAAATGTGAAACGTGTGCTATGGGTTTCGTATCAAAAGGCGAGTTAGACGCTCACACGCGCAAGCACAGCGGCGCGCACCCCTTCATCTGTGACTCGTGTGGCAACGGCTTCACAACGTCCAGTGCTCTCGTAAAACACAGACGGACACACACCGGGGAGAGACCTTATGCTTGTGACCTCTGCCATATGAGGTTCGCTGCAACCGGCACGCTGAAGAACCATAGACGAACACACACAGGCGAGCGTCCATACCAGTGTTCCCATTGTGAGAAATCATTTGTGCAACGGTCAGACCTGATATCACATATTAGATGTCATACTGGTGAAAGACCATTTGTATGCCCACAATGTGGCCAAGCGTTCAGGAAAGCGGCCGCCATGAAAACCCACGTGAAAATGCACGCCAGAGAGGCACAGACTAATATGTCTATACAAGGAACGGTTCTAAACGGAATACATTGTGATGGACATATTAATGTTTAA
Protein Sequence: MEINVEAFDRICRACLTQSGNMKSLFTKLEDGHVLLDLLVFTINTDANSSDGLPKQVCVDCATFIHKISEFRRRCIESETILKTVYQNSCDQYYAKNDSNSKENEVKIDFIDKSDNIVEEIDKRDISALFPNEIQFKKLDDQTFKTEVAVDDDFSDSFDDREFLIVPVELKHEKSDLKTYKCVCGEEFSSKTEYKEHSKLHNCKKKVKVEKTALNSEIICQKCNLTFDLVSDWNEHLKTHISEEIRQFQCSLCLRKFKTKKTLSKHIKRHEKTDNIKYTCPKCKREFKYKSFLESHMLSHSNTEYLCDYCPERFTNKKSLELHKDVHKKRKNVCPFCDKSFLMVCTLKDHLRTHTGEKPFLCSICGKGFSQKNNLAQHMRRHMGVKPFKCETCAMGFVSKGELDAHTRKHSGAHPFICDSCGNGFTTSSALVKHRRTHTGERPYACDLCHMRFAATGTLKNHRRTHTGERPYQCSHCEKSFVQRSDLISHIRCHTGERPFVCPQCGQAFRKAAAMKTHVKMHAREAQTNMSIQGTVLNGIHCDGHINV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -