Haes016310.2
Basic Information
- Insect
- Hemithea aestivaria
- Gene Symbol
- -
- Assembly
- GCA_947507615.1
- Location
- OX382331.1:13025476-13036067[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.012 0.92 10.7 0.6 3 23 734 755 733 755 0.90 2 23 2.4 1.9e+02 3.4 1.4 4 23 1108 1129 1106 1129 0.84 3 23 0.031 2.4 9.4 0.6 1 22 1134 1155 1134 1155 0.95 4 23 3.6 2.8e+02 2.9 0.3 1 21 1196 1216 1196 1219 0.88 5 23 0.00014 0.011 16.8 0.9 2 21 1229 1248 1228 1249 0.94 6 23 0.21 16 6.8 0.8 3 23 1300 1321 1298 1321 0.95 7 23 0.00047 0.037 15.1 0.6 1 23 1327 1350 1327 1350 0.95 8 23 0.14 11 7.3 0.0 1 23 1374 1397 1374 1397 0.90 9 23 0.0063 0.49 11.6 3.5 1 23 1402 1424 1402 1424 0.97 10 23 0.015 1.1 10.4 1.0 1 23 1430 1452 1430 1453 0.95 11 23 0.0019 0.15 13.2 1.5 1 23 1466 1488 1466 1488 0.97 12 23 0.0017 0.13 13.4 4.0 1 23 1538 1561 1538 1561 0.96 13 23 0.0021 0.16 13.1 1.4 1 23 1624 1647 1624 1647 0.96 14 23 0.0013 0.098 13.8 2.1 2 23 1673 1695 1672 1695 0.95 15 23 0.099 7.7 7.8 0.1 2 23 1701 1723 1700 1723 0.93 16 23 0.092 7.1 7.9 0.1 1 21 1768 1788 1768 1789 0.94 17 23 0.0014 0.11 13.6 0.6 1 23 1799 1821 1799 1821 0.93 18 23 0.0001 0.0078 17.2 0.3 2 23 1909 1931 1909 1931 0.93 19 23 4.9e-07 3.8e-05 24.5 1.3 3 23 1938 1958 1937 1958 0.98 20 23 0.0063 0.49 11.6 0.5 1 23 1977 2000 1977 2000 0.93 21 23 0.31 24 6.2 0.0 1 23 2022 2044 2022 2044 0.97 22 23 0.031 2.4 9.4 0.6 1 23 2050 2073 2050 2073 0.95 23 23 0.00029 0.023 15.8 0.4 1 23 2081 2104 2081 2104 0.96
Sequence Information
- Coding Sequence
- ATGAATGTGAACTATGAGCGTGTTTGTAGACTGTGCTTGTCATCTCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACTCGGAACCTCCCGTCCTCGCCTCGAAAATCAACGACTGCGTGTCAGTTCAGATAAACGAAAATGACGAACTGCCGACGAATGTCTGCAGGAAATGCATGGACAATGTCAATAACTGGCATATATTCAAGACTGTTTGTGAAAAGACACAAAACAAACTAGAGTCTCTCATTAAAAAGGATGGCAGCCTACTAGAAGAGGTGAAAGTGAAGAGTGAGCCATTATCTGATGAGGCTTATGATGATGGAGTGGTTATAGATGGATCTTACCCAATAATTGAGAATGTCATTTCTGCTAACAAACTTCAGCCGGAGGGGCCGCCCATCTTGGCTTCTTTGGGTCTCACACCGAGGAGTGACAAGACCAATGTGGATCCCAGAATGGACTGGCATCGAGTTCATGCAATACTGGACACGATCCAAGAAAGTGATATCATTGATTCACTGCAGTCCACCGAAGAAAGTAACCTTAGCCATCAATCTGACCACGACTCTGAATCAGAGACAGAACTACAAACCGGCTTGGACGATATCTACACATCCCGTGAACACGGATACTTGTGTAAAAACAAAACCCTACTATCTAAAAATCCACACAAATCAGAAACAGCCGAGGAAACTAATAAAGCAAGAAAACGCAAAGCCAAAGCCGTGAAGCATTGTCCTCGACCTAAAAACGCGTGGCAGCTACTGTTCACCGACGATCTACTCGAGCTCATTGTCACATCGACCAATGAAAGTATTAGGAAACTGAGTAAAGATACCACCACTCAGAGCGAAATACGAACGCTCATTGGCATTTTATATATGCACGGAATAATGCGGCCGACGCATGGAAATTACGCTGAACTTTGGGACAGCAACACCGGTATAACATGCGTTAAGAATGCTATGACTTACGACCGATTCAGATTCTTGCTACAAAACTTACGATTCGACTGTGAAAACGATGATTCTTTGATCCAATTCGACGTGATGAAACGCATACGAAAAGTGTTTGAAATCTTCGCCATGAATTGCAGGACTGTATTCGAGGTGGAAGAAATAGCGGTCGTCGATGAGATCATTGTACCAGTTTATGGACCTTGCCCGTTTCGCTACGATATTGATAAGAAGTCGTTGAAATGTGGCATTAAAGTGGTACTACTTGTTGATCCTAATAACTTCTACGTAAGCAATTTGGACGTGATAACTGACCCATATTTCAGTGCAGAGGAGATTGTTAAGAAACTAAACAGGCATCTCAATGGGACGTGGAAAACGATCATAATGGACAGCTGGTACTATTCAAAAGAACTGATGAGCACATTGAAGAATTATTTCGAACTGTATACAGTGGCTGCGTTGAACCCAAAAGATGAATTAATACCTCCACTATTCCTATCCAATTACAGGAAATCCCGGACGTTCATGAGTGGGTTTCTTGATGAACAGGTCTCTCTGACGTCATATGTGACTGCTGAATCTAAGGCCATCAACATTATGTCAAATGTGCCGAAGTTTTATAAGAGAGGTCCTAAAATGATTCATTTAAATTCGGTGACATTGTACAAAAAGCATCAATCTGCTGTAGAGGTACTTGATGTACTGATGCATTACTATACGACAATGCAGCACACGAATGACTGGACACTTTCGTTGTTCTTCACACTATTAAACATTGCTACTGTGAACGCTCAAGTGATATGGTCCTCTGAGAATATGAATGCTACTAAACGGAGACTGTTCATAAGAGATTTGGCTACGGCATTGATGGAACCTGGTGATTTATTGATTCCTTCATTAGATGAGAAGTGTAAACGCTCTGCACCGATGCTGTTAAATGAACCTTACTATAAGAATAGAAAGAGATGTCAGATTTGTCGGGGAACTAGTAAGCGTGACCGTAGGACCAAGATTTACTGCCTCAAATGCAGTCAGTTTATCTGTAGGGAGCATAGTGGGGTGGAGAGCGAGAATAACGAAGACGAATACTTCGAGGATGAAATAAATGAAGAACCACCTCAACCAACGAAAGTTCCAAACATGCCGGAGGTGTCCATCACTGTGATGAGGCCCACAGGTGAGACTCTCCACGCCAGACAAGGAATTCAGCAATTAGCCTCCAAGGACTGCCTCATCTGCGGCCGATCCTACCGATACTCCCACAACGCTCGTCGACATGAGCTCGCCTCACACAGCTTCGACCGCTACACCAATAAAATAACACACAAAAAGTCACACATGCAACCGAAACTTAGACCAAACCCATTCAACCCGAAAGCGCGACTCATGCCCAACCCCATAAGCCATAAACTACAATTTTTATCAAAGAAACTTCCCGCCAAAATAATGCCACAGAAAATTATCAACCCACCGAAACCGATTCCTATTAAAGCTTCTAAAGCGCCACAAAATAACCTGCCGTATCCTTTGCGTATAAAGGCACTGAAAGATTTGCAAATAAAGAAAAAGGAACCGCAGATACTGAAGACGTTGCTGACTGCTAAACCAGAGGTACTCGTATCTGAACCGGAGATATTGAACTCTGGCCCAGAGAGTCCTGAAACGTTAATATCCGAACCTGAGATAGCGTCATTCCAGGTAGAAGCTATTCTTTCTGAGCCGAACGAAAATGAATACGAACAGAACCAAGACGAGGAAGCCGATATGGACCATAATCAGAGTCAAAATTACGACACTGTAGACATGGAGTCCGACCACGAAATAGAAATCGCACGTCAACAAGAAAACGAAGAGGGAATTGATATGGAGGAAAATGCTGAAGAAACTTTAAATAACGAAGAAGAGATAACCGGTGAAGAAGCGGAGAAACACGATGAGACCGATAACGAGGGAGACCAAGATACCGTCGATAGCCAGGGACCAATGGAGATAGACGAGAACATTGAAGGCGAAGGAGTAGAAGAAGAAGGCGAAGCTAAAGAAGAGGGTGAAGATAATGAGGAAGGCGAACAGGAAGAACACGAAGTGAATCCCGACGCGGAAGATAATGACGACGAGGAGGAAATTACACCCGCACCGGTCGTGGAAATGAACGAGGAACTGCAACCTAACTCGTCCAGCGAAATCAACGAAGAAGAAGAAGAGATGGACGAGTCTACGGCTCTCAATGACACCGAGAACGCTGAATCTAAAGAACTTGATCCTGACAAAACTTACGTCACTAAAGTACAAAGGGAATTCATCAATAAGTACCGAAATATCATTGAACAGATCAACACGAAGCGATGCCTCTGCTGTGACAAATCTTACCCGCGTAGAAAAGCCGTCGTGCAGCATTTGCAGAAAAATGGGCACAAAGTACCAAAACACACATGCTACAACTGTGTTATCACATTCAGTCACATTGGTGCTCTATTGAGTCACATGAGATCCAACAGTTGTACTGATTTGTGGAAAATTATTTATGAAGAGAATGGTATCACTGACGATATCGTTCTTGAAAACCAGCCCCCTAAGAAATGCAATTCCAAAGACATCTTCAACGCACGCTCCTATGCGTGTAGACTTTGTCCTGCGAAGTTCAATTTGAAGCAATCTATAATGAAGCACGTGTTCGATGTTCACGAAGATGGTCAGTCAGCGGTACCCCTGAGATGCGTTCACTGCCGAGCCAGCTTCAAGGACAAGTCATTGCTCAAGAAACATATACGTATCGGAGAATGTACAGTCTACGTCCACTGTGATTTATGTGCCGGACAGTTTGATACCATGCACACCTTTAACATACACGCTCTGGCAGAACACAATGATTACTTCGAGAAAAACGAAACTCAATCCAAATGTGTCGACAGTCGCGCCACTAACTGTCCTATTTGCTTTAAGGACCACATCAATTACCAGAATTTGGTGAAACATTTGAGAATCATTCATAACGAAGACAAACCCCATTATTGTCAGAATTGTGATGAGAAATTCGAACAGGCCGCCGACCTGAACAATCATATATATTCGGCGCATACCGATCGTGGTCTGCATCAAGTCGAGCCGGACATGTCCCTCGTGAAGGAGGAAGCCGAGGAGTATCATTATTCTTGTACAGAATGTAATGCAATATTCGAGACAGTCGACGCTTGGACGGACCACCAAGTCGCAGAACATAATCAAGTGGCGCATCATTGCGATCAGTGCGACAAAAAATTCTTGCGCCCCTCTGAACTAGCTGAACACAAAAACACTCATTTGAGAGTTAAGTTCTACCCCTGCAGTGTATGCTCTAACTCATACAGTACTCCTCAGAAGCTATCTGAGCACGTCCAACAGCATCATCCTGGAGCGGGAGCGATGGCTGCGGTGGATGCTGAATTTTTCTGTGACATCTGCATAAGATCATTTAAAAGCCGTCAGGCGTTTTCAAACCATATGCGCATACATGCCAGCAAGCCGACAACTAACAGAAAACCGAATGAACCGAAAGGATTCGATCCGCGCATTATCGGAAAACCAATTAAACAATTTACCATGGTGCAACCTGGTTTCATCAACTTCAAGCCAAATAATACAAACGTTCCTAACGCTCCCTACTGTTGTGATATTTGTGGTAAGGGCTTTATGCACAAGAAAAACATTTGGAAGCATAAGAAAGTCTTGCACGCTGATATATTAAATGACAGAAACGACAGTGAAGATAACACCATGCATGCTTCCACTGAAGACGATGACTACAATCCTGACGAAAACGGTGCTCTCTCCACACCACAGTTTAACAGTTTTAATTTCTCTAACTTCTCCAATAACTCCACAAGTTTCCAGCAGACACCTCAGCAAGAGGCCATGCCCTACTCGTGCGATCTATGTACGAAGCGATTCCCGCTTAGAACTAGTTTGTGGAAGCACAAACGCGCTAAACACGGAATCGTGAACCCTGGTGCCAGTGCGAGCAACGAATCGACTCCGCAGGGCACGCCGGGAGAGACCGGCCGATCCAGTTGCACCATATGCAAAATAACCTTCTCCGATAAAAAGTCCTATTACCGTCACAGAAAGAATGTTCATAAAACGGCGACGCAAATGTGCAAAATATGCGGTAAACCGCTCAACTCAACGCTTGAACTTTACGAGCATCTTAAAGCTGCTCACGCGAGGGAATTACTCGGATATAACGCCAACCAGGGCACAACTAAAACTCAAGAGGTAGTACCTCAAGAACTCGAACCTGAATATGACAACGAACCAGATTCTGGGGACCCCAGTTTAGATTATCAAGCCAGATATCCGTGCGACGCTTGTGGCAAACAGTTTGTAGGCTTGTTGGCGTTGCAAAACCATCAGTGCGTCAATCAGGTATCCCAGCAACCGCAGACTTTCGACTGTGAAATATGTCACAAAAGCTACACGTCCATCGCCGCATTGAAAAGTCACCGCGGTTGGCACTTGCGTTCGCCCGACGGTAAGGCCGCCGCTAACAACAGCGGGCTGTGGATGCCGCAGCACAAGGTGACCAGCAAAGTGAGCAAACACGAGGTCGTGGACGCGGTGCAGCTCGCTCGTGTGTCGCACTCGGCCCCCGCCGCCGCCGTCACCGCCAAGAGAAGATTGCCGCCCGAGGTCGAGGTCACGGTCGTCAACCCTAACAAAAAACTACGTTCCGACGACTCTGTCGAACTGGAGCAACAGGATCCCCTCGAGGGTAGGTACTGCAATATCTGCGACAAAGAGTTCACGAAACGCGCCGCCTACCAACGTCACATGGACGAAGTCCACCAACCCAATTCTGTTTTCTGTCCGATCTGCGACAGAAGTTTCACACGGAAATCTACCCTGCTGGTGCACATGAAAAAGCATTACGAGAGCGGTGAGGCGAGCGCGGCCACGCCTCGCTTGGAGGAGGACGACGGCCACGACTGTGACGTCTGCGGGGCGCACTTCGATAACGCGAAGGCTCTGGAAGCTCACAGAGTGAGGAACCACGCGGAGGATTCAGCAGGAGATTCGGAGGACGATGGTGCGGTGACGACGCTGCAGCCCGGGGAGTTCACGTGCGGCCAGTGCGGAGACGGCGTGGCCAGCCCGCGGGACCTGCTCGCGCACCGCACCATGCACGCCACTCCCACCAAGTTCTTCTGCAACATTTGTAAGGTTTACTTCGCACGTGCGCTCGACCTCTCGTCCCACACGAGAGCGCGACATTCTGATAACGACAAAGTATTCTTTCCCTGTGCCATGTGCGATCGTTTCTACATGAACAAAAAAAGCTTACAGCGCCACATTGAAATGGCGCATTGA
- Protein Sequence
- MNVNYERVCRLCLSSRGELLPIFPTTSSDDSEPPVLASKINDCVSVQINENDELPTNVCRKCMDNVNNWHIFKTVCEKTQNKLESLIKKDGSLLEEVKVKSEPLSDEAYDDGVVIDGSYPIIENVISANKLQPEGPPILASLGLTPRSDKTNVDPRMDWHRVHAILDTIQESDIIDSLQSTEESNLSHQSDHDSESETELQTGLDDIYTSREHGYLCKNKTLLSKNPHKSETAEETNKARKRKAKAVKHCPRPKNAWQLLFTDDLLELIVTSTNESIRKLSKDTTTQSEIRTLIGILYMHGIMRPTHGNYAELWDSNTGITCVKNAMTYDRFRFLLQNLRFDCENDDSLIQFDVMKRIRKVFEIFAMNCRTVFEVEEIAVVDEIIVPVYGPCPFRYDIDKKSLKCGIKVVLLVDPNNFYVSNLDVITDPYFSAEEIVKKLNRHLNGTWKTIIMDSWYYSKELMSTLKNYFELYTVAALNPKDELIPPLFLSNYRKSRTFMSGFLDEQVSLTSYVTAESKAINIMSNVPKFYKRGPKMIHLNSVTLYKKHQSAVEVLDVLMHYYTTMQHTNDWTLSLFFTLLNIATVNAQVIWSSENMNATKRRLFIRDLATALMEPGDLLIPSLDEKCKRSAPMLLNEPYYKNRKRCQICRGTSKRDRRTKIYCLKCSQFICREHSGVESENNEDEYFEDEINEEPPQPTKVPNMPEVSITVMRPTGETLHARQGIQQLASKDCLICGRSYRYSHNARRHELASHSFDRYTNKITHKKSHMQPKLRPNPFNPKARLMPNPISHKLQFLSKKLPAKIMPQKIINPPKPIPIKASKAPQNNLPYPLRIKALKDLQIKKKEPQILKTLLTAKPEVLVSEPEILNSGPESPETLISEPEIASFQVEAILSEPNENEYEQNQDEEADMDHNQSQNYDTVDMESDHEIEIARQQENEEGIDMEENAEETLNNEEEITGEEAEKHDETDNEGDQDTVDSQGPMEIDENIEGEGVEEEGEAKEEGEDNEEGEQEEHEVNPDAEDNDDEEEITPAPVVEMNEELQPNSSSEINEEEEEMDESTALNDTENAESKELDPDKTYVTKVQREFINKYRNIIEQINTKRCLCCDKSYPRRKAVVQHLQKNGHKVPKHTCYNCVITFSHIGALLSHMRSNSCTDLWKIIYEENGITDDIVLENQPPKKCNSKDIFNARSYACRLCPAKFNLKQSIMKHVFDVHEDGQSAVPLRCVHCRASFKDKSLLKKHIRIGECTVYVHCDLCAGQFDTMHTFNIHALAEHNDYFEKNETQSKCVDSRATNCPICFKDHINYQNLVKHLRIIHNEDKPHYCQNCDEKFEQAADLNNHIYSAHTDRGLHQVEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCDKKFLRPSELAEHKNTHLRVKFYPCSVCSNSYSTPQKLSEHVQQHHPGAGAMAAVDAEFFCDICIRSFKSRQAFSNHMRIHASKPTTNRKPNEPKGFDPRIIGKPIKQFTMVQPGFINFKPNNTNVPNAPYCCDICGKGFMHKKNIWKHKKVLHADILNDRNDSEDNTMHASTEDDDYNPDENGALSTPQFNSFNFSNFSNNSTSFQQTPQQEAMPYSCDLCTKRFPLRTSLWKHKRAKHGIVNPGASASNESTPQGTPGETGRSSCTICKITFSDKKSYYRHRKNVHKTATQMCKICGKPLNSTLELYEHLKAAHARELLGYNANQGTTKTQEVVPQELEPEYDNEPDSGDPSLDYQARYPCDACGKQFVGLLALQNHQCVNQVSQQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQHKVTSKVSKHEVVDAVQLARVSHSAPAAAVTAKRRLPPEVEVTVVNPNKKLRSDDSVELEQQDPLEGRYCNICDKEFTKRAAYQRHMDEVHQPNSVFCPICDRSFTRKSTLLVHMKKHYESGEASAATPRLEEDDGHDCDVCGAHFDNAKALEAHRVRNHAEDSAGDSEDDGAVTTLQPGEFTCGQCGDGVASPRDLLAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHSDNDKVFFPCAMCDRFYMNKKSLQRHIEMAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -