Haes008972.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Hemithea aestivaria
Gene Symbol
-
Assembly
GCA_947507615.1
Location
OX382329.1:12889569-12917133[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 21 3.2e-05 0.0025 18.8 2.2 1 23 417 439 417 439 0.97
2 21 0.0054 0.42 11.8 0.4 1 20 445 464 445 467 0.93
3 21 2.4e-05 0.0019 19.2 5.6 1 23 486 508 486 508 0.98
4 21 0.00011 0.0087 17.1 4.1 1 23 514 536 514 536 0.99
5 21 4.3e-05 0.0033 18.4 5.3 1 23 542 564 542 564 0.97
6 21 4.3e-05 0.0033 18.4 5.3 1 23 621 643 621 643 0.97
7 21 1.4e-05 0.0011 19.9 8.1 1 23 649 671 649 671 0.97
8 21 1.4e-06 0.00011 23.0 2.9 1 23 677 699 677 699 0.98
9 21 0.00012 0.0091 17.0 6.7 1 23 705 727 705 727 0.97
10 21 5.2e-05 0.004 18.1 5.4 1 23 733 755 733 755 0.98
11 21 5.6e-07 4.4e-05 24.3 1.9 1 23 761 783 761 783 0.98
12 21 5.7e-05 0.0045 18.0 7.9 1 23 789 811 789 811 0.98
13 21 1.3e-05 0.00099 20.0 7.6 1 23 817 839 817 839 0.98
14 21 7.6e-06 0.0006 20.7 4.7 1 23 845 867 845 867 0.98
15 21 9.5e-06 0.00074 20.5 5.0 1 23 873 895 873 895 0.96
16 21 2.5e-06 0.00019 22.3 5.0 1 23 901 923 901 923 0.98
17 21 2.1e-05 0.0016 19.4 7.3 1 23 929 951 929 951 0.98
18 21 7e-05 0.0055 17.7 8.1 1 23 957 979 957 979 0.97
19 21 1.6e-06 0.00013 22.8 5.1 1 23 985 1007 985 1007 0.98
20 21 0.00052 0.04 15.0 0.3 1 23 1014 1036 1014 1036 0.97
21 21 0.013 1 10.6 6.0 1 23 1046 1068 1046 1068 0.99

Sequence Information

Coding Sequence
ATGAATCCGGATCACCACAATATCAACACGGGTGGTGGTCAGCCTCCTGGGAGTTCGGAGTCTCAGGGACAGAGAGTCGCTGGCGGTCAACAGCAAGGAACCCTGCCTGCTACGACGTCTGCTACCGACCTGCGAGTTAATACGGCTGCTGTAAATGTGGCTTTGTCAAGTGTGGCCAAATACTGGGTGTTTACAAATTTATTCCCCGGACCTATCCCACAAGTGTCTGTGTATGGATTGCCTGGAACTAGAATAGAGAATGGAAAACCTGTGCAGGATCTAGGCCAACATGCAAGCATACTAAATGGAGATCCAAACATCATCCTCGGACACCATGGGGGTCAGCCGCAGGTCACTGTGTCTGGGGCGGGAGGCCAACAGATACCCGTGTCTCAAATTATTGCCACACAAACTGCTGGACAGACTCATGAAGCTCTGGTGGGTCACACGCACAGCCAACAGCAGGAGCTGTCAGCGGGGGGCGGCGCGACGGTTACCGCCGGGCAAGCCTCCCACCAGGTACCCAATAACCGGGTCGAATTTGTCCAACACCATAACATTGATATGGGTCATCATTCACAACAACACATAATGCAGCAACAGTTGATGACGGCGCGCCCTGATCACAGCAACCAACAGATCCAACTGACAGTAAGTGAAGATGGCATCGTCACGGTGGTAGAACCCAGCAGCAGTAAAATGGTGGACAAGGAGGAGCTCCATGAGACCATCAAACTGCCTACAGATCATACACTGACTGTCCACCAGTTGCAACAAATTGTTGGACAACAGTTGGGAACTCAAGTGTTAGAAAACGTGGTCCGCATAGAGCAAGCAACAGGCGAACCTGCCAACATTCTCGTCACTCACAACGCGGATGGAACCACGTCAATAGAAGCGAGTGCCTCCGACCCACTCTCTATAGTCAAAGACGAGAAAACGCAGTGTAAACTGGAGACCGCACAGTTTGCCATACCAGCTGACATTAAGGATATCAAGGGAATTGATTTGAAGAGTGTAGGCGCAGTGGGTATGGAAGGCGCCGTAGTGAAGATATCATCTGGCGCCGACCACGATATGCACGCAATGTACAAGGTTAACGTGGAAGATCTCTCACAACTGCTCGCCTACCATGAGGTCTTCGGGAAACTTAACGCGGATGGACAGCAACAAAATAAGAGTGAAATAGAAATTGAGGTGCCAGGTCCAAGTCAAGCGATTCCTGAAGCCGAGGCGTCGCCTGGACACCATTCCTGTGATATCTGCGGAAAAGTGTTCCAATTTAGATATCAACTTATTGTACACAGACGATATCACGGCGAGAGTAAACCTTACGCGTGTCAAGTATGCGGCTCGTCTTTTGCAGATCCAGTCGAACTGTCGCGGCACGGAAAATGTCATCTTGCGGGTGATCCAGCTGAGAGGCACGCCAAAAGGGTCGCTCAAGACAAACCCTATGCCTGCACTACTTGCCATAAAACATTCTCACGGAAAGAACACTTGGACAACCATGTGCGAAGTCACACTGGAGAGACACCATATAGATGCGAATTCTGCGCGAAGACGTTCACTCGAAAGGAGCACATGGTGAACCACGTCCGCAAGCACACCGGTGAGACGCCGCACCGCTGCGATATATGCAAGAAGAGCTTCACCAGGAAGGAACATTTCATGAACCATGTCATGTGGCATACAGGTAATGTAATGTATCACTTATTGAGGCTGGCTCACTACGGCAGACCTCATCCTCTAAGGCACTCGCAAGGAGACGCCGCACCGCTGCGATATATGCAAGAAGAGCTTCACCAAGAAGGAACATTTCATGAACCATGTCATGTGGCTGGCATACAGGAGACGCCGCACCGCTGCGATATATGCAAGAAGAGCTTCACCAGGAAGGAACATTTCATGAACCATGTCATGTGGCATACAGGTGAAACCCCACACCATTGCCAAGTTTGTGGCAAGAAATACACTCGAAAGGAGCATTTGAACAATCATATGAGATCACATACGAACGACTCGCCGTTCAGGTGTGAAATGTGTGGCAAATCATTTACAAGAAAGGAACACTACAGTAATCACATAATGTGGCATACGGGTGAAACGCCCCATCGCTGCGACTTCTGTTCAAAGACTTTCACTCGTAAAGAGCACTTGTTAAATCACGTTCGGCAACACACGGGCGAGTCTCCGCATCGCTGCAACTATTGCGCCAAGTCGTTCACTCGACGGGAACATCTTGTCAACCATGTCAGGCAACACACTGGAGAAACGCCCTTCCAGTGCGGATACTGCCCTAAGGCGTTCACTAGGAAGGACCATCTTGTAAACCACGTCCGCCAACATACCGGAGAGTCTCCACACAAGTGTTCGTTCTGCACGAAATCGTTTACGCGCAAGGAGCATCTCACGAACCACGTTCGACAGCACACGGGCGAGTCGCCGCATCGCTGTACTTACTGCTCCAAGTCGTTCACTAGGAAGGAACATTTGACTAACCATGTTAGACAGCACACGGGAGAAACTCCACACAAGTGCGTGTATTGCCCGCGAGCGTTCTCGCGCAAGGAACATCTCAACAATCATCTGCGGCAACACACCGGCGTCACCCCGCACGCCTGTTCCTACTGCAACAAGAGCTTCACTAGGAAGGAACACCTCGTCAACCATGTCAGGCAACACACGGGTGAGACTCCGTTCAAGTGCACGTACTGTTCCAAGTCGTTCTCTCGCAAGGAGCACCTCACCAACCACGTCAACCTACACACCGGGGAGACTCCGCACAAATGTCCCTTCTGCACTAAGACATTCTCCAGGAAAGAACATCTCACTAATCATTTCAGAATCCACACGGGCGAATCGCCTCACCGCTGTGATTTCTGCCAGAAGACGTTCACGCGTAAAGAACATCTGAGAAACCATTTGAAACAACACACTGGTGATGCTACACACACGTGCAAAGTCTGCTCCAAGCCCTTCACGAGGAAAGAACATCTTATCAACCATATGCGATCGCACAGTTGCGGTGAAAGACCATTCAGTTGCGGCGAGTGCGGCAAATCGTTCCCTCTCAAAGGCAACTTGATGTTCCACGAACGGTCACATCAGAAGGCCGCAAGTGGCACGAAACCGTATCGTTGCGATGTCTGCTCTAAGGAATTTATGTGCAAAGGACACCTGAATTCTCACCGGCGCACGCACACGGAGGCGGGTGAGGCGGCCGCGCCGCGTACTGAAGGCGACGCTCCCGACTGCACCGCCAAGTGTGTCAAGGTTGAACTTGACCCCCTTTTTAGTGTAAAAAAGGTTGAACTTGACCCAATCGTCTTGGAAACCACTAAAACGGAAGAAGCCCAACCAACTGAAAATAATGTAGTTACGCAAACATCGCCTAATCCTACTGTGATGCAGATAGCTAATCAGGTTCCCGCAGTCCCATCATCAAGTGGTACTGGAAGTCCAACGTTCACCCACACGGTGACGTCACAGCATCACGCCGGCACCGCGATTGCCCACCATCCAGTCAGCGTCACCTACTAG
Protein Sequence
MNPDHHNINTGGGQPPGSSESQGQRVAGGQQQGTLPATTSATDLRVNTAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPGTRIENGKPVQDLGQHASILNGDPNIILGHHGGQPQVTVSGAGGQQIPVSQIIATQTAGQTHEALVGHTHSQQQELSAGGGATVTAGQASHQVPNNRVEFVQHHNIDMGHHSQQHIMQQQLMTARPDHSNQQIQLTVSEDGIVTVVEPSSSKMVDKEELHETIKLPTDHTLTVHQLQQIVGQQLGTQVLENVVRIEQATGEPANILVTHNADGTTSIEASASDPLSIVKDEKTQCKLETAQFAIPADIKDIKGIDLKSVGAVGMEGAVVKISSGADHDMHAMYKVNVEDLSQLLAYHEVFGKLNADGQQQNKSEIEIEVPGPSQAIPEAEASPGHHSCDICGKVFQFRYQLIVHRRYHGESKPYACQVCGSSFADPVELSRHGKCHLAGDPAERHAKRVAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGNVMYHLLRLAHYGRPHPLRHSQGDAAPLRYMQEELHQEGTFHEPCHVAGIQETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLNNHMRSHTNDSPFRCEMCGKSFTRKEHYSNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCAKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCSKSFTRKEHLTNHVRQHTGETPHKCVYCPRAFSRKEHLNNHLRQHTGVTPHACSYCNKSFTRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLTNHVNLHTGETPHKCPFCTKTFSRKEHLTNHFRIHTGESPHRCDFCQKTFTRKEHLRNHLKQHTGDATHTCKVCSKPFTRKEHLINHMRSHSCGERPFSCGECGKSFPLKGNLMFHERSHQKAASGTKPYRCDVCSKEFMCKGHLNSHRRTHTEAGEAAAPRTEGDAPDCTAKCVKVELDPLFSVKKVELDPIVLETTKTEEAQPTENNVVTQTSPNPTVMQIANQVPAVPSSSGTGSPTFTHTVTSQHHAGTAIAHHPVSVTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01030446;
90% Identity
-
80% Identity
-