Haes003240.1
Basic Information
- Insect
- Hemithea aestivaria
- Gene Symbol
- clz9
- Assembly
- GCA_947507615.1
- Location
- OX382342.1:14333120-14334283[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.5e-07 0.00057 20.2 0.0 1 36 16 52 16 59 0.90 2 2 1.7 1.8e+03 -0.6 0.0 7 15 309 318 308 320 0.79
Sequence Information
- Coding Sequence
- atgccacgaatatatgtgaaaaaggggactcgaacgagagaggtggatgaagatgcaatggaatctgcgatgaaggaggttttagataaaactttatcaattcggaaatctgctaaaAAATATGGCCTGAAACCAACCACACTTGAAACTCGCTTAGCAAAGCTTAGAAAACATACAACCGATCACATCCCAGCGCGTGTTTTTACGTCCAAGTTCACGTCAAATCAAGTGTTCACTACCGAAGAAGAGGCATTATTGAACAAGTACATAACAGATTGCTCTAAAATGCACTATGGATTGACAATTGTACAGGTTAGAAAATTGGCATACGAATTCGCTAAAGCCAATAAACTGCGTTATCCACCTACCTGGGATCACAACAAAATGGCTGGTAAAGATTGGGTAGACAGTTTTCGCAGGCGGAACGTAAATTTAAGCTTAAGAAAACCGGAAAACACTAGTGCTGCAAGGTCTTACGGATTCAACAAAACAGCTGTAAATGGTTTCTTCGAGAACTTAGAAGAGGTTTTGATAAAACATAACTTCACAGCAGATCGGATTTTTAACTTTGATGAATCCGGAATATCTACGGTTTTAAGCACGCCCAAGGTCTTAGCTGAGAAAACCCAAAAACAGATTGGTCAACTGGTTTCGGCAGAACGAGGTGAACTAGTTACATTTGGAGGAATTATCTCAGCTGGTGGTAACACAATTCCGCCATTATTTATTTTTCCAAGGGTCCATTTTAAAGATCACTTCATGGTAGGTGCTCCAGAAGGCAGTCTAGGAGTTGCTACTAGAAGTGGCTGGATAAATTCTGGTATATTTTTGGAGGTGCTCAAACATATCCAAAAGAAAACATCTTGCTGTAAAGAGAATCCTATTCTGCTCCTGGTTGACAATCACGAAAGCCACGTCACTATAGAAGCCGTTGACTATGTGCGTAATAATGGTATTGTTTACCTATCGTTCCCGCCTCACACAACACACCGTCTACAACCCTTGGACGTAGGAGTATTTGGACCTTTCAAAGCCAAACTGAAGACTGCTTTTAATGATTGGCATGTGAATAATCCAGGAAAAACGCTTAATATATACAATATATTAAGCGTTTTTCGTCGGAGACTCCAAGCGGAGCGGTCGTGCCCACGAGCTGCGTACTAA
- Protein Sequence
- MPRIYVKKGTRTREVDEDAMESAMKEVLDKTLSIRKSAKKYGLKPTTLETRLAKLRKHTTDHIPARVFTSKFTSNQVFTTEEEALLNKYITDCSKMHYGLTIVQVRKLAYEFAKANKLRYPPTWDHNKMAGKDWVDSFRRRNVNLSLRKPENTSAARSYGFNKTAVNGFFENLEEVLIKHNFTADRIFNFDESGISTVLSTPKVLAEKTQKQIGQLVSAERGELVTFGGIISAGGNTIPPLFIFPRVHFKDHFMVGAPEGSLGVATRSGWINSGIFLEVLKHIQKKTSCCKENPILLLVDNHESHVTIEAVDYVRNNGIVYLSFPPHTTHRLQPLDVGVFGPFKAKLKTAFNDWHVNNPGKTLNIYNILSVFRRRLQAERSCPRAAY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00637581;
- 90% Identity
- -
- 80% Identity
- -