Basic Information

Gene Symbol
XBP1
Assembly
GCA_947507615.1
Location
OX382331.1:15614801-15616279[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.8e-18 8.7e-15 55.1 14.3 2 64 41 103 41 104 0.95
2 2 7.6e-05 0.085 13.5 0.5 32 55 85 108 84 113 0.91

Sequence Information

Coding Sequence
ATGAGTGCTCCTATCATCATCACCGTGCCCAACAACTACCTGATGGAAGAGGACGAGGTAGTTGTGGACGTCCCACCGCCGCCGCCATCGCGCAAGCGGCGGCTGGATCATCTCACTTGGGAAGAGAAAATGCAACGAAAGAAGTTGAAGAACCGCGTGGCTGCCCAGACATCACGCGACAGAAAGAAAGCTAAAATGGACGAGATGGAGGATCGCATAAAGAACCTGGAGGACAGGAACGATAAGCTCGTGAGCGAGGTGGAGAGTTTGAAGGCGTTGAATGAGCGTCTGCTGAGCGAGAACACATCGCTCCGCAGCGAGGCGGCGGCGCGGACCGTCGCGGGTGCCCCCGGACCGGCAGAGTCCCCTCAGCAGAAGGCAGGGCACCCGCAGGCGATCCGCGCGGCGCGTCTGCTGCTGACGATGTGTCTCCTATCGCAGACCTCCTCGCGCACTTCAACTCAGAAGAGTATCTCGATACCCTCCATCAACTTGCAAACTCCCTCCTCGAAGAAATTGATGCAAGTGCTGCAGGAGCGGCTCAAAATGACACAGTCAGGGACACTGGAGGGAGCCCTAAAGGAACTAAAGTGGTGGGGCCCGCAGCAGAGCAATTGGAATCCGGTGAAAGTGCAATCGTAG
Protein Sequence
MSAPIIITVPNNYLMEEDEVVVDVPPPPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEDRIKNLEDRNDKLVSEVESLKALNERLLSENTSLRSEAAARTVAGAPGPAESPQQKAGHPQAIRAARLLLTMCLLSQTSSRTSTQKSISIPSINLQTPSSKKLMQVLQERLKMTQSGTLEGALKELKWWGPQQSNWNPVKVQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
-
80% Identity
-