Basic Information

Insect: Hemistola chrysoprasaria
Gene Symbol: -
Assembly: GCA_947063395.1
Location: OX346736.1:6062818-6075242[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0013 0.1 13.8 1.6 1 23 1164 1186 1164 1186 0.98

2 8 0.015 1.2 10.4 0.0 2 23 1253 1274 1252 1274 0.92

3 8 0.09 7.2 8.0 2.1 1 23 1278 1300 1278 1300 0.97

4 8 0.0041 0.33 12.2 0.3 1 23 1307 1330 1307 1330 0.96

5 8 0.00029 0.023 15.8 1.4 1 23 1365 1388 1365 1388 0.97

6 8 0.00043 0.035 15.3 1.4 1 23 1394 1416 1394 1416 0.98

7 8 3.5e-06 0.00028 21.9 1.3 1 23 1422 1444 1422 1444 0.99

8 8 0.00039 0.032 15.4 4.2 1 23 1450 1473 1450 1473 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0013	0.1	13.8	1.6	1	23	1164	1186	1164	1186	0.98
2	8	0.015	1.2	10.4	0.0	2	23	1253	1274	1252	1274	0.92
3	8	0.09	7.2	8.0	2.1	1	23	1278	1300	1278	1300	0.97
4	8	0.0041	0.33	12.2	0.3	1	23	1307	1330	1307	1330	0.96
5	8	0.00029	0.023	15.8	1.4	1	23	1365	1388	1365	1388	0.97
6	8	0.00043	0.035	15.3	1.4	1	23	1394	1416	1394	1416	0.98
7	8	3.5e-06	0.00028	21.9	1.3	1	23	1422	1444	1422	1444	0.99
8	8	0.00039	0.032	15.4	4.2	1	23	1450	1473	1450	1473	0.96

Sequence Information

Coding Sequence: ATGACTCTAATGGCGATAAATGCAAAAACAGATGAAGATCGCGAAAATTGGTACGTCGATAATGGAGCTACAAGCCACGTAACCAATCAAAACGATTTGTTTGAGACATTTGAGCATTTTGACGACTGTCACACGGTGACAACAGCCAATGGAGACACCATTCAAGCAGTTGGAAAGGgaacattagttgttgaagcagATGTAGaaggaattaaatatttgattactCTAAGCGACGTTTGGTATATTCCTAGCGTAAAAAAGAATTTGTTTTCAGTTTTGGCAGCTCAAGATAAACTCTCAAAAAGTACCTTTACGTCTACAGCAACGACATGTAAGTTGTCAGATAACGGGACAGTCAAGCTTATTGGATACAGGCAAAGAGAAGGTGGTCTATACAAACTACGATTGAAAAACATACGGCCTGATCACCAATTAGAAATTAATAGCTTAGACTCAAAGAATTTACTACAACTTTACCATGAGAGGTTGGGACACCAAAGTAAAGCACATGTAAAGAAAGTTGTTGAGAGAGAACTTGGTATCAAACTGAAACTTGACAGCGAAATTTGCGAAGGTTGCATCTATGGCAAGGCGCATAGACAAAAATTTGGTACGAGAGAAAGGGCGACAGAGGCAGGAGAACTGATACACGCTGATGTTTGTGGACCTTTCCGATACTCACTTGGCAACTGCAGATATTTCGTGCTGTTTAAGGATGATATGTCAAAATTCCGTTACGTTTACTTTCTAAAACGAAAATCGGAAGTAAGTCAAAAGTTAAAGCTAGTTCTTGCTGAGATTAAAGCAATGGGACATACAGTAAAAGAGCTTTTGAGTGACAATGGAGGAGAATTTGATAATGCTGAAGTAAGGAGAATACTGCAAGAGCATGGCATCAGGCAGAGACTCACTATGCCATATACCCCACAACAGAATGGTTGTGTAGAGAGGGAGAATAGGACAGTAGTCGAAGCGGCTAGAGCTATTATGCAGGCAAAAGGATTACCTCAAGGACTGTGGGCTGAACTTGTCCAAGCTACAGTCTACATACTGAATCGAACTGGCCCAACACAGATAGATAAAACTGCATACGAGATCTGGTGTAACAAAAAGCCAAGGATTCGACACTTGAGAATTATCGGAAGCACTTGCTATGCTCATATTCCAAAAATAACCCGAAAGAAATTGGATAAGAAGGCCGTGAAGGGCATATTGATCGGATATGATAATGATGAGGGTTACAGGGTTTGGATCAAAGAAACTAACAAACTTGTACGGTCAAGGGATGTTATCTTTGAAGAGAAGACACTAAACCCAACGAATCAAGATCCGATACCTATTGAGACAGATCCATTGACGTTCGACGACCCTATACCTCTGAGGGTACTGTTTCAGCAGTCGCCACAATCAGATGAGAGAAGAGTATCGTCTTCGTCAAATACTGAAGATGATACTGATGAACCAACTTCACATAGTGAACCATCTTCTGAGCCGATTGAGGAATCATCTCGAGACAGAGAGATAAACGAAAATGACTCAAGCGATTACGAATCTGTTCATTCAGGTGAAAGAATAGAAGTGGAACCTGAGAGTGAAGAAGCTATACCTATTCAAGAAATTGAAGGAGAAGGTAGGATGACGCTTAGAGATAGGTCGACACTCAGACCTCCAGACAGATTTAACGAATTCGTAATGAGTACAGTAGATGACATCAATGATATTAAAGAGCCTCAGACTTATCATCAAGCTATCCATAGTAAAGACAATAAACAGTGGAAGAAAGCTATGGATGATGAGATTAATTCCCTGAAGAATAATGAGACGTGGGAAATGGCAGATTTACCTAAAAACAAGAAAGCCATCCCATGTAAATGGATCTACAAGGTAAAGCTAAATCCTGACGGAACTATCGAGCGGTACAAGGCTAGACTAGTCATCAAGGGTTACTCACAGAAGAAAGGAGTAGATTTCGATGAGACCTTCAGCCCAGTGGCTAAGATGAGTTCAATTAGATTGATACTTAGTATAGCCGCGAGAGACAACATGTTGCTAACACAATTTGACGTCTCAACAGCATTTTTATACGGAAACTTGGCTGAAGAGATCTATATGAAACCACCCGAGGGATACAACGATGGTGAGCTGACAGGAAAAGTTTGTAAATTGAAAAGGAGCCTATATGGTCTTAAGCAAGCGCCTCGTTGTTGGAACAATTGCGTAACTGAGTTCCTAAAAGAGACTGGATTTGTACAAAGTGAAGCAGACCCATGTATCTTTGTAAGGCAGAGAGGGGAAAAGAGACTGATATTAGCTCTCTATGTTGATGATGGTCTTCTTGCATCAACCCATAAGCAGGAATCACAGAAATTTGTTGAGGAGTTGAAAAGACGATTCAAAATAACGACAAAACCAGCGTCTTATTTTTTGGGCCTAGAAATTGAGAGAAGAGACAACGGTTCAATAAATGTGACTCAAAGTGCCTATACAAAGAAATTACTGGAAAGATTCAACATGCAGGATTGCAAACCAGTTGGAACACCTATCCTGAAAGATAATACGGCAGGACTAAGAGAAGACGAATCTGCTGTCGATAAAGATAAGTTTCCTTACAGGCAGGCAGTAGGAGCTTTAGCTTATTTGATGATGGGATCAAGACCAGATATATCATACGCTGTTGGTATTGCGTCTAGACATTTAGAAAATCCTACTACTGCAGATATAATAAAAGTGAAGCGTATATTGCGTTATTTACAAGGAACAAAAGGTTGGGGCTTGAAATATAGCGGAAGTGGTCACCATGGGTTAAAGTGCTACAGTGATGCCGACCATGGTGGAGATATCGAGACTTGCCGATCAACGACGGGCATGGTGTGCTTATATGCCGGAGGAGCAGTCTCATGGAGAAGCCACAGGCAAACTTCAGTCGCTATATCGAGTACAGAGGCTGAAATAGTTGCAGCAAACGGCGAGAGCAAACAATGCGGTATATGTGCGACGTGCGTGTTGCGTCTGCGCGAGGCGGCCGCATTCCGTCGCCAGGTGCTGCAGAGCGAGCAGCTGTTCCTCGATGTGCTACATGCTAAGGAAGAGGGTGACAAGAAGTCAGATATGGAAATAAAGGTGGAGCCTATGATGGATGATGTAATCGACGCAGATGATACAAATGATCATCTTGATGCCCAACATACTGAAGACGAAGAAGAAGCTAAACACAAAGTCAAATCAATAAAACCATCGCCCAGGACCCGAGAGAGCCGCCCCAGGAAAGCCAAGAACAAAAAGAAGGTTGTAAAGAAGGAGATCATCAGCAAAATTAAGAAGATAAGAATAAAACTTGACTCTATGCTTGAAGAACCAGtcCCAGAAAAGCAAGACCGCCGCAAGCAAAAAGACCAACCTCTAGACCACGACTCAATGGCATTCAAAAACGCAGTAACAATCGTCCACAACTCATACGTTTGTCCGTTCGTCAACCGAACGAGCATATTCTATTGCTATTATTGCAAAGATCAATTCACAAACCCATCCGAATTACGCGAGCACACACTCACACACGACCCAAACAACTTCGAAAGCATGATCGAGTACAATAAAATACCGAAAATCGATATCACAAGAATCGATTGTCGACTGTGTTCACAAACAATCGATAACATCGACCTATTCAAAGACCACGTCTCTAGTGCGCACGGAAAGTCAATATTTCCCGTCACTAACGAGTTCCTGAAATTCAAATTGACCATAGACAATATTAAATGTATAGAGTGTGGTGCTGTATTTCCGTATTTCGATTCTCTAATGAAGCATATGATCGATCATTTCGGAACGCATATTTGCGACCAATGCGGCGCTTGTTTTTTAGAAGTGACATCCCTAAGGAGCCATATAAAAACACACACTCGGGTAGAAACCAATTTTCCTTGCGAAATATGCGGCAAAAATCTGAAATCTAAATACAGTAGATATTTACACATTGCCACAGTTCACGAGAAAAAACCAACAGTTAATTGTTACAAATGCGAAGAAAGTTTTCTTTCTTACGCTCTACGAAATAAACACTTAATAGAAGTTCACGGAGATAAAAGAACATTTCCTTGTAAATTATGTGACAAAGTTTACAATAGAAGAAAAACTTTAGTTGAACATAATAGGCGAAATCATTTAAAAGTGTTAAGACATCAGTGTGACCTGTGCGATCAGAGATTTTATCTCCCTTCTAGGTTAAAAGAACACATGGCAACACACACCGGTGAAAGGATTTACAGATGTGAATTTTGCGATAAAAGTTACCCACGACAGCAATCTCTGCAAGAGCATTTGAGGTCACATAATCACGAGAAAAGACATAAATGCCATGTTTGTGGGTCGACGTTCGCGCAAAGTACGACGCTGAAGAGTCATTTGAAAAATCTGCACCAGTACGATTTAGATGCGAATAGTTTtagttaa
Protein Sequence: MTLMAINAKTDEDRENWYVDNGATSHVTNQNDLFETFEHFDDCHTVTTANGDTIQAVGKGTLVVEADVEGIKYLITLSDVWYIPSVKKNLFSVLAAQDKLSKSTFTSTATTCKLSDNGTVKLIGYRQREGGLYKLRLKNIRPDHQLEINSLDSKNLLQLYHERLGHQSKAHVKKVVERELGIKLKLDSEICEGCIYGKAHRQKFGTRERATEAGELIHADVCGPFRYSLGNCRYFVLFKDDMSKFRYVYFLKRKSEVSQKLKLVLAEIKAMGHTVKELLSDNGGEFDNAEVRRILQEHGIRQRLTMPYTPQQNGCVERENRTVVEAARAIMQAKGLPQGLWAELVQATVYILNRTGPTQIDKTAYEIWCNKKPRIRHLRIIGSTCYAHIPKITRKKLDKKAVKGILIGYDNDEGYRVWIKETNKLVRSRDVIFEEKTLNPTNQDPIPIETDPLTFDDPIPLRVLFQQSPQSDERRVSSSSNTEDDTDEPTSHSEPSSEPIEESSRDREINENDSSDYESVHSGERIEVEPESEEAIPIQEIEGEGRMTLRDRSTLRPPDRFNEFVMSTVDDINDIKEPQTYHQAIHSKDNKQWKKAMDDEINSLKNNETWEMADLPKNKKAIPCKWIYKVKLNPDGTIERYKARLVIKGYSQKKGVDFDETFSPVAKMSSIRLILSIAARDNMLLTQFDVSTAFLYGNLAEEIYMKPPEGYNDGELTGKVCKLKRSLYGLKQAPRCWNNCVTEFLKETGFVQSEADPCIFVRQRGEKRLILALYVDDGLLASTHKQESQKFVEELKRRFKITTKPASYFLGLEIERRDNGSINVTQSAYTKKLLERFNMQDCKPVGTPILKDNTAGLREDESAVDKDKFPYRQAVGALAYLMMGSRPDISYAVGIASRHLENPTTADIIKVKRILRYLQGTKGWGLKYSGSGHHGLKCYSDADHGGDIETCRSTTGMVCLYAGGAVSWRSHRQTSVAISSTEAEIVAANGESKQCGICATCVLRLREAAAFRRQVLQSEQLFLDVLHAKEEGDKKSDMEIKVEPMMDDVIDADDTNDHLDAQHTEDEEEAKHKVKSIKPSPRTRESRPRKAKNKKKVVKKEIISKIKKIRIKLDSMLEEPVPEKQDRRKQKDQPLDHDSMAFKNAVTIVHNSYVCPFVNRTSIFYCYYCKDQFTNPSELREHTLTHDPNNFESMIEYNKIPKIDITRIDCRLCSQTIDNIDLFKDHVSSAHGKSIFPVTNEFLKFKLTIDNIKCIECGAVFPYFDSLMKHMIDHFGTHICDQCGACFLEVTSLRSHIKTHTRVETNFPCEICGKNLKSKYSRYLHIATVHEKKPTVNCYKCEESFLSYALRNKHLIEVHGDKRTFPCKLCDKVYNRRKTLVEHNRRNHLKVLRHQCDLCDQRFYLPSRLKEHMATHTGERIYRCEFCDKSYPRQQSLQEHLRSHNHEKRHKCHVCGSTFAQSTTLKSHLKNLHQYDLDANSFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -