Basic Information

Insect: Hemistola chrysoprasaria
Gene Symbol: -
Assembly: GCA_947063395.1
Location: OX346714.1:9105828-9112146[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00035 0.028 15.5 1.0 1 23 462 484 462 484 0.97

2 8 6e-07 4.8e-05 24.2 1.5 1 23 490 512 490 512 0.98

3 8 7.9e-06 0.00063 20.7 0.6 2 23 521 542 521 542 0.98

4 8 9.8e-06 0.00079 20.4 0.6 1 23 548 570 548 570 0.99

5 8 1.8e-07 1.4e-05 25.9 2.0 1 23 576 598 576 598 0.96

6 8 2.2e-06 0.00017 22.5 2.2 1 23 604 626 604 626 0.97

7 8 9.8e-05 0.0079 17.3 7.2 1 23 632 654 632 654 0.97

8 8 0.00013 0.011 16.9 1.3 1 21 660 680 660 681 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00035	0.028	15.5	1.0	1	23	462	484	462	484	0.97
2	8	6e-07	4.8e-05	24.2	1.5	1	23	490	512	490	512	0.98
3	8	7.9e-06	0.00063	20.7	0.6	2	23	521	542	521	542	0.98
4	8	9.8e-06	0.00079	20.4	0.6	1	23	548	570	548	570	0.99
5	8	1.8e-07	1.4e-05	25.9	2.0	1	23	576	598	576	598	0.96
6	8	2.2e-06	0.00017	22.5	2.2	1	23	604	626	604	626	0.97
7	8	9.8e-05	0.0079	17.3	7.2	1	23	632	654	632	654	0.97
8	8	0.00013	0.011	16.9	1.3	1	21	660	680	660	681	0.95

Sequence Information

Coding Sequence: ATGTGTGAATGGCTCTCCCATGGTGAATGGTGCGACGTAACACTGTTGTGTGGAGGCAGATCGTTTAACGCTCACAGAGTGGTACTTGCCAGTGTCAGCAACTTTTTGAGGCGCATCTTGTTATCCTGTCCGGTAGATGAAACATCTACCTTGATCGTCTTGCCAGACTTTGACTTGGAAGCCATGTCTTCAGTCCTTTACTATATGTACAACGGTGAAGTGATTGTTCAAAAACATAAACTGGGATTGTTCTTAGATATTATACAAGCGATGCAGATATACATTGACTGCCAATACTTGCCAATTATAAAAGATTTAGTGGAAGACGGAAGTTCAAATTTTAATACGTGCTGTGATCTAAACGGTTCCAAAACAAGTATTTTTAGTCTGGGAAACGATAGTGATAAGGATCAAAGGTTTCTAAATATAAGAAAAGGTTTTGAGATGCAGAGTGTTCTTTTGCAAAATTCACTAAACGAGTGCGATTTTCAAGATAACGTCGGACGACGTCAGAATGGGAGCGAGCTCCGCAAGTCTCGTTTAGGAAATCTGAAATCGCCATACGAAGACCGACAAAGGAACTCTTTCCTACGTGATTTATATATCGAGACATATCCTCAAAACGGTAATAGTAACGGTCTGACGGAAGGCGTGCTAGCAATATCAAATGAATCCTATCGTTCTCCGGCATCTGTGTTCTCGACGAATGCAAATGGAGAACATCTCGGCGACGGCGCACTCTCTAGATTTACTCAAAATGCATCTTTACATAACAATTCTGCCATATTTCACTTCAACCAACAATTACGTGGTATCAACAACTTTATTGGAAAACGTGAAATGCATACGATAAATTCACTTAATTTAGGTATAAGTTCAGACACGGATTCAAGAGCCTCAATTATTGATAAAAGACCAgcaaggaattttctcaatgacaggaaTCAACTTGTTCCCCAAGAATCCGACGATACAAGTTTGATGACTGGACATTCTCCAATAGATATTACAAAATCTATTCTAGAAGCTATGAAATATCATCTATCTAGAGATGCTAAATTCTCATTGCCGCAGTGCTCCGCCTTTGATGAAAAAGAAAGAAGAATTGATTTTAAATTAAGCAATTCACCTAAAGTGTTTAATCAAGTATTAGAAAACCCATGGAATCCACGGAAACCTATTAACTACAGACCATTTAGAAGAAAAGAGAGCCTTGATCCACCAAATTCTGTAGAGgTAAAGAGTAATGTAGAACAAAACGATAGCAACAACAATATATCAACAATAATACCAGCTGTTATGGAAAGCATCGTAGATAGGATGTCTTTCGTCACCGTACAGCCAAATGAATTAGCTTCGTCATCGTGCATGGATCGAGATAGTTTCAAATGCATCCACTGCAATCAgGTGTTTACAAGTGGCGATGCGCTGGCGCTCCACATGAGGAGGCACTCGACAACCGCTCGATATACTTGCGGAGAATGTGGCAAAACGTTCTCACAGCTACGGAACTTCAAGTACCACATGTCTATACATAGGGGCACTAAAGAGTTCGCAGCGACCTGCACTGTTTGCGGGAAATACTTCAACGACAGAGGGTACCTGAGCAGCCATATGAAGATTCATCGGAATCGTAAGGAATACAAATGCTCTTTATGTCCAAAGTCGTTTAACCAACGAGTGGCCTACAATATGCACGTTCGGATCCATACAGGTGTAAAGCCCCACGCGTGCGAGGAGTGCGGGAAGGCGTTCTCCCGCAAGATGTTGTTGAAGCAGCACCAGCGTACGCACTCCGGCGAGCGCCCCTACGCCTGCACGCACTGCGACAAACGTTTCGCCGACAGATCCAACATGACGCTGCATCTACGACTACACACTGgtGTCAAACCGTTTTCCTGTTCTCTTTGTCCGAAATCATTCACAAAGAAGCATCATCTGAAGTCTCACCTGAACTTCCACACCGGTTCGAAGCCGTACTCCTGTCCTCGCTGCAAACTTGCCTTCACTCAGTCTTCTAATATGAGAACACACTATAAGAAATGTAACGCACCAGATCATTCTGGTAATGATAgtgaaactaaataa
Protein Sequence: MCEWLSHGEWCDVTLLCGGRSFNAHRVVLASVSNFLRRILLSCPVDETSTLIVLPDFDLEAMSSVLYYMYNGEVIVQKHKLGLFLDIIQAMQIYIDCQYLPIIKDLVEDGSSNFNTCCDLNGSKTSIFSLGNDSDKDQRFLNIRKGFEMQSVLLQNSLNECDFQDNVGRRQNGSELRKSRLGNLKSPYEDRQRNSFLRDLYIETYPQNGNSNGLTEGVLAISNESYRSPASVFSTNANGEHLGDGALSRFTQNASLHNNSAIFHFNQQLRGINNFIGKREMHTINSLNLGISSDTDSRASIIDKRPARNFLNDRNQLVPQESDDTSLMTGHSPIDITKSILEAMKYHLSRDAKFSLPQCSAFDEKERRIDFKLSNSPKVFNQVLENPWNPRKPINYRPFRRKESLDPPNSVEVKSNVEQNDSNNNISTIIPAVMESIVDRMSFVTVQPNELASSSCMDRDSFKCIHCNQVFTSGDALALHMRRHSTTARYTCGECGKTFSQLRNFKYHMSIHRGTKEFAATCTVCGKYFNDRGYLSSHMKIHRNRKEYKCSLCPKSFNQRVAYNMHVRIHTGVKPHACEECGKAFSRKMLLKQHQRTHSGERPYACTHCDKRFADRSNMTLHLRLHTGVKPFSCSLCPKSFTKKHHLKSHLNFHTGSKPYSCPRCKLAFTQSSNMRTHYKKCNAPDHSGNDSETK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00790451;
90% Identity: iTF_00790451;
80% Identity: iTF_00790451;